Difference between revisions of "Os05g0569300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0569300| Description = Similar to G-box binding factor 1| Version = NM_001062897.1 GI:115465524 GeneID:4339653| Length = 4827 bp| Definiti...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0569300|
 
GeneName = Os05g0569300|

Revision as of 20:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0569300

Description

Similar to G-box binding factor 1

Version

NM_001062897.1 GI:115465524 GeneID:4339653

Length

4827 bp

Definition

Oryza sativa Japonica Group Os05g0569300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28416360..28421186

Sequence Coding Region

28417196..28417255,28417858..28417902,28417993..28418085,28418165..28418248,28418855..28419037
,28419140..28419182,28419577..28419797,28419966..28420043,28420310..28420435
,28420522..28420731

Expression

GEO Profiles:Os05g0569300

Genome Context

<gbrowseImage1> name=NC_008398:28416360..28421186 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28416360..28421186 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcatgatgaagctgttgctacacaaaagattgggaaaacaacctcccctcctaaggatcaaccaactccatgtccatttcctgattggtccgctgttcaggcatattatggccctggtgtcttaccaccgacatattttgccccagcaatagcttcaggccatgctcctccaccatatatgtggggtcctcagcctataatgccacccccttttgggaccccgtatgctgcaatgtacccacacggtggagcttatccacaccctcttatgcccatgatggcaaatccattgagcatggaaccagccaagtctgcaagcagtaaggaaaaaggctccaacaagaaacttaaggaagttgatggggctgcagtatccactgggagtggtgacagtaaaaaaacaatgacgtctagtggggattacagtgcagaaggctctagtgatgtaaatgatctaaaggtgggcaagactggcaggaaacggagattggatgatggagctggtgctgaaacatcagcagctgcaaagatggaaaatgctttacctcccagccatatattgggaagtactgcgattttgccaaatcacagctttccagctcaagtaattaggcccagtgctactaatgttgctaattcgagggcattgggcacaccaatatctccaccgcctggtgtgattgttccaagtcatacaggagtatcaacagaattactgatcaaggatgaaagggaattaaagcgtgaaaagaggaaacaatcaaatagggaatccgccagacgatcaaggctgagaaagcaggctgaaacggaggatctggctacacaagtagaatcacttacagcagagaacacgtcacttagatctgaaatcagtaggctatcagaaagctccgagaagctcaggctggagaattcggctctaatggggaagcttaaggatcctgcagcatcgacccaggcagaaacatctctgcagaaaaccaccacagcctcctctcctcgcgtcgtggagaactttttgtcaatgatcgacaacacgaacaagacgagtgtcagacacacagagcatgctgaacccaagcttcgacaactcctcggctccggcccggccactgatgttgttgctgcaagctaa</cdnaseq>

Protein Sequence

<aaseq>MAHDEAVATQKIGKTTSPPKDQPTPCPFPDWSAVQAYYGPGVLP PTYFAPAIASGHAPPPYMWGPQPIMPPPFGTPYAAMYPHGGAYPHPLMPMMANPLSME PAKSASSKEKGSNKKLKEVDGAAVSTGSGDSKKTMTSSGDYSAEGSSDVNDLKVGKTG RKRRLDDGAGAETSAAAKMENALPPSHILGSTAILPNHSFPAQVIRPSATNVANSRAL GTPISPPPGVIVPSHTGVSTELLIKDERELKREKRKQSNRESARRSRLRKQAETEDLA TQVESLTAENTSLRSEISRLSESSEKLRLENSALMGKLKDPAASTQAETSLQKTTTAS SPRVVENFLSMIDNTNKTSVRHTEHAEPKLRQLLGSGPATDVVAAS</aaseq>

Gene Sequence

<dnaseqindica>837..896#1499..1543#1634..1726#1806..1889#2496..2678#2781..2823#3218..3438#3607..3684#3951..4076#4163..4372#ggagatcaatctgctttcacgtctcctctctctctccgcgtgcttcctccgagggtctcctcctccaccgccgtctcgcttcccggcacgcgcgcgcgggcggcggcgagctccctctccttcgccactcctccaacccctgtgcggctactccggtgcggagccggcgagcgagcatgttctaagtggctctcttccttaaatctctctacaagaggcaattgaattgaaggtatttgttctcttcctagccgctgctttcatgagcgataggagatccatgctagcaagttggattgatttgttcactccgtccaaattattagtccgtgtcctcctctttgttccggatttcgatgatgcgttggtggtggagttctaattgcagtttgtatcgattgggtgtgtgactgaatatctagttactgaagcagtttcatgttgatgtatgcgtttgccctgtcctgttcctggaaccaggattaataataaacatatgaaaagttatttgacctcgaaaaaaaaattgtgctctccaatgtaggagaccgacgaaacttttgtttttaatagctgcttttagttctaaaaatcataattcgacttgtatgataggaatttgcatcttatgaaaagattgagaattgtttttacacaagttgatagctttatatcgatactgttgggcagtgtgccaaaacgtccttttggtgaaatcaaacatttctcacatttcaggctcacgcaaatttttatttatttttagttgcttaactgcacaccattataacctgaatttctacttgataagcagacagcaggctttcataaaaggcatggctcatgatgaagctgttgctacacaaaagattgggaaaacaacctcccctcctaaggtaagaatacctgttttagttgtagttgtactgactactgagatattccttgtgatctgttatgttatatcttctttgctgtgaattgaaattagttgtactgttgtcgaaaacagtggcatgaccaaaagccccagatcatgatcaatgtatatataacccgtctctttttccttcactcttttttgctttcctttatgtacctctatctctgtctctcttctctctaaccttaaacttgtaacctgtaaacctcatttctattaatgaaatgactataaggtagagcatgctctaccttcttgcgtcaaaaaaaaaaaactagtctcttaccgcctcttttctaaaagggagagttcttctttctccaaaagtaggggacagagtacgtaaatgaattagcaacctttgaattacatccagtattcccaatctgttaacatgatgtctacactttgaggtcttatttccactacatggcttactctgaggtcttgtgtggaatgacaacatattgtattttctcacctgactcatcaatttcaagggtaggagagtagagctacatccataaacatcttatcaattgccttcatttgcaggatcaaccaactccatgtccatttcctgattggtccgctgttcaggttaagtgttttgctagtaaattatcctataatctccacttccaaaagatagaatatatataatgtaagcatcaatacaaaatttttcaggcatattatggccctggtgtcttaccaccgacatattttgccccagcaatagcttcaggccatgctcctccaccatatatgtggggtcctcaggtaatttattttcgatctatctatgcaatgaagttccaggtgttgcatgaaatctgaatttctctctgcatatctgcagcctataatgccacccccttttgggaccccgtatgctgcaatgtacccacacggtggagcttatccacaccctcttatgcccatggtaaacattaatcttgatgtgcttccatacacttttttgttcaattaaacttgttagttgaagcattaaatataagatttctgcctaaccattttagatagatgttttgttatcaataatggacttgcacaagatattgtagttttgtggaaaatcggacaaccaagtcccatcatatacagtatcaaattaacttctaacatggcagatatttcggaaaagtctatcacggttgaccagacaacacagtatattaaagggaaaaaatgtatgctaatctgacttctgtaatgttgtttacggtgcaccataatcagcactgatttcataccaagcatatcaaacttttaaatgatgtgccgaatactagcttacaggaagaacatacgtgtaggcacagtaacagaatcacattcctaatgatccatcacgcttgttccccttggaccatacagtccgattgttttcattatttcagttacagcgtcagaacctctcatattgattcttattgaaaaattttagccttaatcctatgttgacttgtgattcaatatatttattctgctgactcctattaatttgttttatgtcaattctttcaagatggcaaatccattgagcatggaaccagccaagtctgcaagcagtaaggaaaaaggctccaacaagaaacttaaggaagttgatggggctgcagtatccactgggagtggtgacagtaaaaaaacaatgacgtctagtggggattacagtgcagaaggctctagtgatgtaaatgatctaaaggtaccagttagtttcaaatgcatgctacattgtgttatcttgttgttttctaatgaacatgtctgaatatgcttaaatatactaaaattgtacattctttaggtgggcaagactggcaggaaacggagattggatgatggagctggtatttcactttgtaacaacttttttaatatcataggcataatgctaatttcattttccctcatctttgtaagacttgttatagatgtatgcagtaccaaacttgattaatcatttgcttcagcggttatcttgtcctctatcatgccttgtttggtataacttgcaacaatttttttattctcaacattatccctttgtattatttggctcttcttaatagaaaatagtgtaaagcttctgcaccttcctgagaaaagggaaaaatatttatcaaatgacacataagacacatctttatctttcagtttcttaatggaatggtgactaatcaaatcctgtttcaaatttgactttgtaaaaaaatagtggctaacaacttaaatctctgccaggtgctgaaacatcagcagctgcaaagatggaaaatgctttacctcccagccatatattgggaagtactgcgattttgccaaatcacagctttccagctcaagtaattaggcccagtgctactaatgttgctaattcgagggcattgggcacaccaatatctccaccgcctggtgtgattgttccaagtcatacaggagtatcaacagaattactgatcaaggtatcttcaatctgacatcatttagaaaactgtgaaatcagaaattatgaaaaacaataattttatgtaaataagttaactttcatgtcattgttattccttgaaaaaaattacactagtatatatacatttctcagggattaactttgtggaattcttatatgccaggatgaaagggaattaaagcgtgaaaagaggaaacaatcaaatagggaatccgccagacgatcaaggctgagaaagcaggtatattatagtagcaattaccctgtgatcaatatgagcaaaacccagttttctgaagaagaaaaagaggcatcatcctggaaacatggactgaaactgaaaaccaatttggacattctgttttgggaaagggattttattgcaaatcccagtgaagtcacaggataatttaatcacatacatgtcatgtcacatacaaaatttcaagttagtacagaacatatttccataatgctttcacttatgatgtcagtgttttcgtttaggctgaaacggaggatctggctacacaagtagaatcacttacagcagagaacacgtcacttagatctgaaatcagtaggctatcagaaagctccgagaagctcaggctggagaattcggctctaatggtactgaacctcttttatgcttccacataacccttaacatgtattatatacatttctctgatagaaatgtgccttattattcctaggggaagcttaaggatcctgcagcatcgacccaggcagaaacatctctgcagaaaaccaccacagcctcctctcctcgcgtcgtggagaactttttgtcaatgatcgacaacacgaacaagacgagtgtcagacacacagagcatgctgaacccaagcttcgacaactcctcggctccggcccggccactgatgttgttgctgcaagctaatctgccattttccctgtcacagaggagagactacgcgcatgcggcctggggattttgcaagctcacgctactactcacataacattcggcagtacagtgttaggtgtcaatttggtcagtatattcaggtgaccatctactactcaaaataccgtttccaattgctgttccctgctcaggcatggaagcttgctaggtgagaccaatgtaccacgttttagcagtgttgtaacataggggtgttgtgctgcatgccaacctcaaaccttgtgagatcgctaaacactttttagaattgaaatttgtggagaccaaactaaatgaaatgtaacctaccctttttacttgggtatatgggcccatattctttacatggcttggaactgtaactttgtaagatgtttttagtcaaacttctttaaaatttatatttataacactaaattagtttcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0569300, RefSeq:Os05g0569300