Difference between revisions of "Os05g0576300"

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(Created page with "{{JaponicaGene| GeneName = Os05g0576300| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001062935.1 GI:115465600 GeneID:4339693| Length = 226...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0576300|
 
GeneName = Os05g0576300|

Revision as of 20:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0576300

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001062935.1 GI:115465600 GeneID:4339693

Length

2262 bp

Definition

Oryza sativa Japonica Group Os05g0576300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28783813..28786074

Sequence Coding Region

28784495..28785184,28785317..28785658

Expression

GEO Profiles:Os05g0576300

Genome Context

<gbrowseImage1> name=NC_008398:28783813..28786074 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28783813..28786074 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggaagctcttctacctccggctcatccaggccgcttctactcggactttggcccgaagccgttcggcagcggagatcaacggctctcctcgcccaacctgctgaccaacggtggagatctcttctacggctgctactcccccttcagccctacccgcgtgctctcgccgccgccgccgcggcgcgccgcctcgttctcccactgctcgtcctcctccgactccgtcgtcgacgacggagatggtgcgggggcagcggcagcgaccgagcaccgcctccacctcgcccacctcgcgctccagtaccaggagatggccaaccgcttcgagctctgcctctcccacctcgccgatgccgcggacgaggcggccgcgctccgtcaggagaacgccgagctccgcgtcgccaacaacgacctcgcatgccgcatcgccaagttcggcggaaggcagagctccgccatcgccctcgccggtgacctccgccgcctccgcctccccaaggagcagaccgtgccagctcttcctcctccgccgcagtctccgccggccgcactgatgaatcccgtcgccgtccccgagaagcaggctgttcttccgaagagcatctccatccgttcgaccggataccagaagctgaaccagggcggcaagcatcgcgtgtcgaagccggtgaacgtcggctcgcagcgcgtgttcgtgggcattgacggcgcggagggaggcgagcacaaagttggtgtgaagaaggaggagccgcccatgggtgggctggagttcgaggtgtacaaccagggcatgttcaagacggagctgtgcaacaagtgggaggagaccggggcttgcccctacggcgaccagtgccagttcgcccacggcgtcgcggagctccgccccgtcatccgccaccctcgctacaagacccaggtctgccgcatggtgctcgccggcggcgtctgcccctacggccaccgctgccacttccgccactccatcacccccgccgaccgcttctccttcggccattga</cdnaseq>

Protein Sequence

<aaseq>MQEALLPPAHPGRFYSDFGPKPFGSGDQRLSSPNLLTNGGDLFY GCYSPFSPTRVLSPPPPRRAASFSHCSSSSDSVVDDGDGAGAAAATEHRLHLAHLALQ YQEMANRFELCLSHLADAADEAAALRQENAELRVANNDLACRIAKFGGRQSSAIALAG DLRRLRLPKEQTVPALPPPPQSPPAALMNPVAVPEKQAVLPKSISIRSTGYQKLNQGG KHRVSKPVNVGSQRVFVGIDGAEGGEHKVGVKKEEPPMGGLEFEVYNQGMFKTELCNK WEETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRHSIT PADRFSFGH</aaseq>

Gene Sequence

<dnaseqindica>683..1372#1505..1846#agattgccagagagattcagaggcagagccgcgagccccacgacaccctcctcctcctctccctatccccttctcccccaaatcatccttctcaaaatcaaaggctccgggtggtgagcgctaatcgagaggtgtgctgcttgatccaatctacacttggggttaaccgcttggtgatttagttgcgcttgcgccactagttagttaatcagtggatagttgggggttgggcgtgctgttctgctccacttgggatgcgagtttgatcgattttgcttttttattttttaagcttgctgtttctcgtgctgcattggtgagaaactagtttttgttcgtggattcagcgttttcttcgcgatcaggcgtccggttccgttttttcttagcgtttttgtcccgttttttggtgtggaatcagtctggttctcgatttagaaactagttgattacttgttctcactgttacagtggatgagatcgcgtcttcgaatgcgatttttgattgcttccatgatacgattttcctgttctcagagctagattctgtggaaagcatctctactttttttttattttggttcgcttcgtgtggagaatttagtgtgatttttgttggaattttcattgacattttgatccgtttacttgcagggattagttgttcgcggagatcgccgctatgcaggaagctcttctacctccggctcatccaggccgcttctactcggactttggcccgaagccgttcggcagcggagatcaacggctctcctcgcccaacctgctgaccaacggtggagatctcttctacggctgctactcccccttcagccctacccgcgtgctctcgccgccgccgccgcggcgcgccgcctcgttctcccactgctcgtcctcctccgactccgtcgtcgacgacggagatggtgcgggggcagcggcagcgaccgagcaccgcctccacctcgcccacctcgcgctccagtaccaggagatggccaaccgcttcgagctctgcctctcccacctcgccgatgccgcggacgaggcggccgcgctccgtcaggagaacgccgagctccgcgtcgccaacaacgacctcgcatgccgcatcgccaagttcggcggaaggcagagctccgccatcgccctcgccggtgacctccgccgcctccgcctccccaaggagcagaccgtgccagctcttcctcctccgccgcagtctccgccggccgcactgatgaatcccgtcgccgtccccgagaagcaggctgttcttccgaagagcatctccatccgttcgaccggataccagaagctgaaccagggcggcaagcatcgcgtgtcgaagccggtgaacgtcggctcggtgagaccaaatcccccaattcctccattgtgttgtgtctggctcccactcttgcagcgcactgactcctgtgctgaatccaaaatcccaatcctaactagtacgatgttcttgatgcgacaatgcaagcagcagcgcgtgttcgtgggcattgacggcgcggagggaggcgagcacaaagttggtgtgaagaaggaggagccgcccatgggtgggctggagttcgaggtgtacaaccagggcatgttcaagacggagctgtgcaacaagtgggaggagaccggggcttgcccctacggcgaccagtgccagttcgcccacggcgtcgcggagctccgccccgtcatccgccaccctcgctacaagacccaggtctgccgcatggtgctcgccggcggcgtctgcccctacggccaccgctgccacttccgccactccatcacccccgccgaccgcttctccttcggccattgatcatacgtgtcagtccatcaccgatcgccactctctcactccctcctaatctcctctctctttgataatgacatgaaaagagggggaaaaaaagaagaggccgtaaataaggtatactatttagttgcacaaagcaaatgagaactgaattatacaattagcacacaggcgaaatgtgaatactagagagttatagctattaagttgtggtcagatatgtgagttattacattgggggttatttgtcctatggttcatattgttatataggttattatgatcttgtttccttgtttcgttttaagcaaaccgggtgacaaattgttggactcatgtaagtaaggctgttatttggatatctgaattatgtatggaacacttgtacgctatgaaagtgcctgaaggctgttatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0576300, RefSeq:Os05g0576300