Difference between revisions of "Os05g0579900"

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(Created page with "{{JaponicaGene| GeneName = Os05g0579900| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001062958.1 GI:115465646 GeneID:4339717| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os05g0579900|
 
GeneName = Os05g0579900|

Revision as of 20:15, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0579900

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001062958.1 GI:115465646 GeneID:4339717

Length

3389 bp

Definition

Oryza sativa Japonica Group Os05g0579900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:28949246..28952634

Sequence Coding Region

28949246..28950856,28950975..28951050,28951262..28951332,28951430..28951495,28951583..28951672
,28951780..28951956,28952419..28952454

Expression

GEO Profiles:Os05g0579900

Genome Context

<gbrowseImage1> name=NC_008398:28949246..28952634 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:28949246..28952634 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttacaagaatcttcagaagtcaccagcattgataactcactggcaagacaaattaaatcattgattctagaagatctcgagggatcttctgaaactcaagctttcccaggggaccccggtactgctgggtcagaagctgaaacttatgggaggaaccttggtacaactgggttggaaactgaaagttatgggagggaaaagttcagttttgttgaagaatcattcatgcataatgcaaacaggaatgtaactgaatcacccgtagaaactccaatccctgaacaagtagagaatgttgagattgaagatagagttggttcatgtgcacattctgaagaatcaaccgtggataaagattccgagtgtcctgaagagggaagtgatattacttcacaaaacaacaatctgccagatcatgaagattcaactatgctaaatgtatttgaggtggccagcaaattgattaaaagagacctagatcaagaaaagcaagatacactacagcctggtgaagtagaaactagaactgtcttggatagtaatgacaaagatacaaaagaaaacccttcagaaaatagtaacacgataggtagtgaagaagtcttgagtcacggtaaccaggaggaccagaaggtgcctgaaatggataaaaccaaaggacgaagtgatgcaaatgcacaagttaaattaagtggtgtaaacttttatgaagatggagatgttacaagtgctgctaataatgttacaactagattgactacaaattcaaaaggccaggcgtcttcctcttcagaaatgctaactggcagacagcacttgcctcaagatgctggacctgctatttctcagacatctaacggaactttccctagtcttgaaaagaccgaagaagtttgcaaagaagctgggagagaattaccaacagataaatctgctgcatttgaagatgagaatagcagggcatgcaaatcaaaggcagagctaaagcagcaacaatttcattctgagaagagtagcagtttacctaaatctgcagaaggtcatatcccatcttctgctgatatatcaagaaaagaaacacctggggttcagagactcaaagagcagggaagtctaagaacagaaagggaaagagagaaggacaaagaggcttctcggagactggaagaaacaaaagaaagggataaaaaatttgagaaggaaagggaaattgctgaagagagggaaagaaaaaaactagaagaacaggaaagggagagggaacgggaaaaggatagacttgctgttgaaagagctacaagagaagcacatgagagagcatttgctgaggctcgtgaaagggcagaaaaaatagcattggaaagggttactgcagcacggcaacgggcttctgctgaggcccgagaaaaagaagagagagcgagtactgaagcagctgctgagagggctgctaggataaaagcagaacgtgcagcggttgaacgagcaactgcagaagctcgagagagggcaattgaaaaggctaaggctgaaaaggctgccgcagaggcaagagaacggagagaacggtacagatcctctttcaaggagagttttaagtccagcaatctggataatcgacaggacacacagtttcagagagcggtttccagtaacttaatgagaaacccagattcatatagcaaagggcttgaggttgaatcagctttaaggcataaagcaagattagagaggcatcaacgcacagctgagcgtgtgacaaaagcactagctgagaagaacatgcgtgacctgctggcgcaaagagagcaagcagagaaacataggttgtctgagtacctagatcctgagatcaagagatggtcaaacggaaaggaaggaaatctgcgagccttgttatccacattgcaatatattcttggagctgacagtggttggcagccagtgccacttacagagctaattacagctgctgctgtgaagaaagcctacaggaaggcaaccctttgtgtccatccagataaattacagcaaaggggtgctacaatcagacagaaatacatatgcgagaaggtttttgatcttcttaaggatgcttggaacaagttcacttcggaggagcgctag</cdnaseq>

Protein Sequence

<aaseq>LQESSEVTSIDNSLARQIKSLILEDLEGSSETQAFPGDPGTAGS EAETYGRNLGTTGLETESYGREKFSFVEESFMHNANRNVTESPVETPIPEQVENVEIE DRVGSCAHSEESTVDKDSECPEEGSDITSQNNNLPDHEDSTMLNVFEVASKLIKRDLD QEKQDTLQPGEVETRTVLDSNDKDTKENPSENSNTIGSEEVLSHGNQEDQKVPEMDKT KGRSDANAQVKLSGVNFYEDGDVTSAANNVTTRLTTNSKGQASSSSEMLTGRQHLPQD AGPAISQTSNGTFPSLEKTEEVCKEAGRELPTDKSAAFEDENSRACKSKAELKQQQFH SEKSSSLPKSAEGHIPSSADISRKETPGVQRLKEQGSLRTEREREKDKEASRRLEETK ERDKKFEKEREIAEERERKKLEEQEREREREKDRLAVERATREAHERAFAEARERAEK IALERVTAARQRASAEAREKEERASTEAAAERAARIKAERAAVERATAEARERAIEKA KAEKAAAEARERRERYRSSFKESFKSSNLDNRQDTQFQRAVSSNLMRNPDSYSKGLEV ESALRHKARLERHQRTAERVTKALAEKNMRDLLAQREQAEKHRLSEYLDPEIKRWSNG KEGNLRALLSTLQYILGADSGWQPVPLTELITAAAVKKAYRKATLCVHPDKLQQRGAT IRQKYICEKVFDLLKDAWNKFTSEER</aaseq>

Gene Sequence

<dnaseqindica>1..1611#1730..1805#2017..2087#2185..2250#2338..2427#2535..2711#3174..3209#ttacaagaatcttcagaagtcaccagcattgataactcactggcaagacaaattaaatcattgattctagaagatctcgagggatcttctgaaactcaagctttcccaggggaccccggtactgctgggtcagaagctgaaacttatgggaggaaccttggtacaactgggttggaaactgaaagttatgggagggaaaagttcagttttgttgaagaatcattcatgcataatgcaaacaggaatgtaactgaatcacccgtagaaactccaatccctgaacaagtagagaatgttgagattgaagatagagttggttcatgtgcacattctgaagaatcaaccgtggataaagattccgagtgtcctgaagagggaagtgatattacttcacaaaacaacaatctgccagatcatgaagattcaactatgctaaatgtatttgaggtggccagcaaattgattaaaagagacctagatcaagaaaagcaagatacactacagcctggtgaagtagaaactagaactgtcttggatagtaatgacaaagatacaaaagaaaacccttcagaaaatagtaacacgataggtagtgaagaagtcttgagtcacggtaaccaggaggaccagaaggtgcctgaaatggataaaaccaaaggacgaagtgatgcaaatgcacaagttaaattaagtggtgtaaacttttatgaagatggagatgttacaagtgctgctaataatgttacaactagattgactacaaattcaaaaggccaggcgtcttcctcttcagaaatgctaactggcagacagcacttgcctcaagatgctggacctgctatttctcagacatctaacggaactttccctagtcttgaaaagaccgaagaagtttgcaaagaagctgggagagaattaccaacagataaatctgctgcatttgaagatgagaatagcagggcatgcaaatcaaaggcagagctaaagcagcaacaatttcattctgagaagagtagcagtttacctaaatctgcagaaggtcatatcccatcttctgctgatatatcaagaaaagaaacacctggggttcagagactcaaagagcagggaagtctaagaacagaaagggaaagagagaaggacaaagaggcttctcggagactggaagaaacaaaagaaagggataaaaaatttgagaaggaaagggaaattgctgaagagagggaaagaaaaaaactagaagaacaggaaagggagagggaacgggaaaaggatagacttgctgttgaaagagctacaagagaagcacatgagagagcatttgctgaggctcgtgaaagggcagaaaaaatagcattggaaagggttactgcagcacggcaacgggcttctgctgaggcccgagaaaaagaagagagagcgagtactgaagcagctgctgagagggctgctaggataaaagcagaacgtgcagcggttgaacgagcaactgcagaagctcgagagagggcaattgaaaaggctaaggctgaaaaggctgccgcagaggcaagagaacggagagaacggtacagatcctctttcaaggagagttttaagtccagcaatctggtaggtgatgtttattgatatgatacactatgtggttctgtttaaggatttcacatagtaatatgtaatgctttctttaacagtcttgacaattttgaaatattggttctggatgcaggataatcgacaggacacacagtttcagagagcggtttccagtaacttaatgagaaacccagattcatatagcaaaggtacttattatttccacaagtattttgtaaattgtaatcttagttcttttttatgagagagttgtggaagttccattgcctcactaatttacaaaacaatgcaagtagtgttgcatttttttctcaaaataaagtgttgttttgcatgaattggtgagtaaacaataattgctctcttatttctttgctctttggtatttgttaactgtagggcttgaggttgaatcagctttaaggcataaagcaagattagagaggcatcaacgcacagctgagcgtgtggtaagccccatttttttgttttgttttgttttgtttcaccctttttagttgtctgtttcgtagtagttctcatgatgtaaatattacctgttcttagacaaaagcactagctgagaagaacatgcgtgacctgctggcgcaaagagagcaagcagagaaacatgtaaggaattgagcacaaacaaaatctcccttctctcgcttgcctacaatttcctcatagaatctgctgcttattttcatgtttcagaggttgtctgagtacctagatcctgagatcaagagatggtcaaacggaaaggaaggaaatctgcgagccttgttatccacattgcaatatgtaagtgactatttgtaaatcccaggaagctgtaaaaccattctgagagactatgacaaacatataacctttttttaatcttttttttctccatttctccctggcagattcttggagctgacagtggttggcagccagtgccacttacagagctaattacagctgctgctgtgaagaaagcctacaggaaggcaaccctttgtgtccatccagataaattacagcaaaggggtgctacaatcagacagaaatacatatgcgagaaggtttttgatcttcttaaggtttgtgcaatgtctacaaaatttgttatgattatttggaagttcattttctcatgtgtccttttccatttctgattgcattagtacaagcatgtttgcaagaactgtgttactctaggatcattctggtttaacaattctctgggaacctttcacctcctaattacgctgttaatacgatgttttgggtcccctgttccttttcaccgttatcgcacaagctaatccgatttagggcctggagattatttagcaagcatgctatgcaagtgtcaataggcaactgtaaatcaactcaaattctagaatgaaccacgccttgattcttcacctttgctacggagtagcttggaaggaactatgattgtttaaacttactgaatttggcttgagttgctccttttcttcatcgcactgacagttttaagcaaattgtgctcaccggatccgcttcttttgcaggatgcttggaacaagttcacttcggaggagcgctaggatggatgctgaaacagccgatttattttcgagacaggaaattcgttagtaattatatagccatattgttagtttgttaattcaatattggtgtaaatatgcagttctagatatcttgctagatgatgatgacgctcgtcgctccttgaatcgattcaatagaagagcttcattgctcct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0579900, RefSeq:Os05g0579900