Difference between revisions of "Os05g0594500"
(Created page with "{{JaponicaGene|
GeneName = Os05g0594500|
Description = Invasin/intimin cell-adhesion domain containing protein|
Version = NM_001063042.1 GI:115465814 GeneID:4339807|
Lengt...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os05g0594500| | GeneName = Os05g0594500| | ||
Revision as of 20:15, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os05g0594500 |
|---|---|
| Description |
Invasin/intimin cell-adhesion domain containing protein |
| Version |
NM_001063042.1 GI:115465814 GeneID:4339807 |
| Length |
5748 bp |
| Definition |
Oryza sativa Japonica Group Os05g0594500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:29677189..29682936 |
| Sequence Coding Region |
29677329..29679092,29679177..29679346,29679793..29679935,29680019..29680160,29680272..29680383 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:29677189..29682936 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:29677189..29682936 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtgtggaagagctggggcggcgtcgtgtttgcggttgcggcggcggcggcggcgctcctgtgctcctccgatgctgccgatgacgtggtctccgtcagcttctccaagacccctccccgcgtctccaggtcggcgtcggccgtcttcaccttccaggtcctgcacaccaatggatcaggcccgtgccaggattgcctcatcacctgcaaggtggacggggagagggcgtgggagtgcggaagaaacagcagcagcagcaacgggacagcggtggtgaggtactcgcggctgaaagacggcaaccacaccttggctgtgtgcgcgggtgcgggacgaccaccaacaacaacaacaacaacaacctgcgccacctacgcctgggatgttgacacggttgctccgacggcgtccgtgaaggcggaggcggggttcacgagcggatccaacgtgtcggtgctcgtctccttctccgagccctgccccggcggaggcggattcacctgcaacgccacctactgccatctgagcgtgtacggtcccgggcgcgtggatccgtcgagtcttcaggtcctccgccctgccctgcaatactccgtccacgtcaccatcccgccggagttgctctatggccgcctcattctcgtcatggccaagggcttctgcaccgatgctgccggccaccacttcatcagaaccgccaactctaccttcaccctgcgcttcgacagacggagcgactcgatgaacatcggcagcagcatccctgagaagctgcttcagatcgagggcgccaccagggtggtggaagccaccaacgacgacaaggacctcagggtatacctctccttcgctgaacccgtcatgaattcttcctcccaaatcctcgccgctctcaccgccaccgatgccattctcacgccaaccaaccgaagcacgctcgggaatcgccgctttggatacctcgttaagaggacatccaacaccgccgttgtcactgtttcctgtgacgggaattccataatcagcagacaaggaactcctgtttcttcttcagagccatacacttttctttacgataatcaaaggccttctgttaagctggcgacatccactgtcagaacaagttcacgcaacatcccggttttgataaagtttgcaaagcctgtcttcaacttcacttcctctgcggtgcaggtttccgggggcaatctcctcagcttccatgaagctagtaagagcatatacacagcgcagatacaggcggttgataatctggtttcggtccacgtcgccgagaactctgctcaggacgttgcaggaaataccaacttaccgtcagatcgtctggaagtgaggcattattctgttcctgcatcatcatcatcgatcgcgatcgtgacgacggtaatttttacagcaaccgcagcattcgccacgctgctgactgtttcaacatcgtcgctactggcatcaggtgtcatccagaggccgccttcttacctcgtatccgagccatcacgaaatctcttgagaatggcgtgccacattcaggtattcgcgctgtcgcgatggctgtcgataaatctgccggtggagtactacgagctgagcaaggggctggagtggagcatcccttacatgcgcctcccatgggaaggcccctctgccgatcctttcgtcggctactccaccatgcccgccatcgcctactccgagatgctcgaccgcaccgctctcgccgccgacgtcctccgccgccctcctgcagctccaggagttgcaatggccatgccgtcgacgtcgccattggacggcaagcctctcaccgccatggagtaccggtatctgttcgagaaccaggacatgaagcccgaggcgcagatcatcatgaagctgcaggatctggacggatggaagtacttcttcaggaacatcttctggctggccgtcatcgctgccgccttcctgctgctgcacgccaccctcctcctctacctcaagctgcgccacaggcacagccacacacacgtcggtgcgctcgtgttccccaggctggagctgatgctcgtcatcctcgccatgccctgcgtgtcccaggcgtcggcggcgctgatccgaggcggcacaacggcggggctggccgtcgggatcgtgctgacgggggtgctaacggcgttcctggtagcgctgctgctgttcctgtcgctgggcgtcaccacggggaggctgctgcagtacaaggaggtgcaccaggaggggcgggagtaccactggtaccaggagattgttcgccggacgctgggacccggcaagcgtggacagtggacgtggaaggaccccgcccgcaccgcctgcctcgtcaagctcggcccgctcttcgaggacctgcgcggcccgcccaagtacatgctctcgcagatcgccggcggcagcggcggcaagcgcgcggcggagcggatcatcgtgtccgacgacgagaacgaggacgccgaggcgccgttcctgcagaagctgttcggcatactgcggatctactacacgttcctggagtcggtgaagcgggtggcgctggggatcgtggcgggcgcgcacgcgtcgtcggaccactcgtcgcgggcgcacgccgtggtggtgctcgccatcgcctccttccagctcttcttcatggtgctcaagaagcccttcatcaagaagcgggtgcagctggtggagatcgtggcggtggcaagcgaggtgttggtgttcgccgcatgccttcggctggtggacagcgggggcagcgccgtggcggaggggagcggggtagggctggccatgctgacggtgttcgcggtggcgttggcggcgcaggtgtgcaacgagtggaacgcgctgtaccggcaggtgcggctgctgagctcggacaggaggtcgttcgtggagggcgcgaaggcggcgtgggtggggctgctgctgctggtgctgccgtcgtcggcgcttggagagcagctggagaagatgaagaagcagcaggagcagccggaggcagtggcactgggtggtggtggtggtggcacggagaggtcgtggctggggcagctgagggagatggccaaggcgagcttcagcaaggagggacagggaggggaggcggaggcgtcggggagcagagcaaagggtgggagccggagcatgtcgtcggtggcgtcgtcgtcggactccaaggcgaagggacccgagaactcgcattcgcagtggagctccaagtccaagggactctacaaggatcttgaggccatcttctccaacaggtag</cdnaseq> |
| Protein Sequence |
<aaseq>MVWKSWGGVVFAVAAAAAALLCSSDAADDVVSVSFSKTPPRVSR SASAVFTFQVLHTNGSGPCQDCLITCKVDGERAWECGRNSSSSNGTAVVRYSRLKDGN HTLAVCAGAGRPPTTTTTTTCATYAWDVDTVAPTASVKAEAGFTSGSNVSVLVSFSEP CPGGGGFTCNATYCHLSVYGPGRVDPSSLQVLRPALQYSVHVTIPPELLYGRLILVMA KGFCTDAAGHHFIRTANSTFTLRFDRRSDSMNIGSSIPEKLLQIEGATRVVEATNDDK DLRVYLSFAEPVMNSSSQILAALTATDAILTPTNRSTLGNRRFGYLVKRTSNTAVVTV SCDGNSIISRQGTPVSSSEPYTFLYDNQRPSVKLATSTVRTSSRNIPVLIKFAKPVFN FTSSAVQVSGGNLLSFHEASKSIYTAQIQAVDNLVSVHVAENSAQDVAGNTNLPSDRL EVRHYSVPASSSSIAIVTTVIFTATAAFATLLTVSTSSLLASGVIQRPPSYLVSEPSR NLLRMACHIQVFALSRWLSINLPVEYYELSKGLEWSIPYMRLPWEGPSADPFVGYSTM PAIAYSEMLDRTALAADVLRRPPAAPGVAMAMPSTSPLDGKPLTAMEYRYLFENQDMK PEAQIIMKLQDLDGWKYFFRNIFWLAVIAAAFLLLHATLLLYLKLRHRHSHTHVGALV FPRLELMLVILAMPCVSQASAALIRGGTTAGLAVGIVLTGVLTAFLVALLLFLSLGVT TGRLLQYKEVHQEGREYHWYQEIVRRTLGPGKRGQWTWKDPARTACLVKLGPLFEDLR GPPKYMLSQIAGGSGGKRAAERIIVSDDENEDAEAPFLQKLFGILRIYYTFLESVKRV ALGIVAGAHASSDHSSRAHAVVVLAIASFQLFFMVLKKPFIKKRVQLVEIVAVASEVL VFAACLRLVDSGGSAVAEGSGVGLAMLTVFAVALAAQVCNEWNALYRQVRLLSSDRRS FVEGAKAAWVGLLLLVLPSSALGEQLEKMKKQQEQPEAVALGGGGGGTERSWLGQLRE MAKASFSKEGQGGEAEASGSRAKGGSRSMSSVASSSDSKAKGPENSHSQWSSKSKGLY KDLEAIFSNR</aaseq> |
| Gene Sequence |
<dnaseqindica>3845..5608#3591..3760#3002..3144#2777..2918#2554..2665#2218..2456#1922..2123#1687..1820#1308..1485#416..628#gtgcatttggccccctctcccctcctgtctgtcccccaccattattccctccctccctcccttcattttttgtctgttccaatctaccaccatacttactgcactgcgacctcaccacactgaactcaagtcagtaatactgccattgtcaagagggagctctagctttcctttcccaaaggcagaggcagcagcgtggcgtgcattcacttccctccctgtccagtactccagtccataacactgttggctgggtgcctgcatgaatgaattcagtaggagtagctcagtaggtcgacacacaccaggtgtaacttcttgagcttttctcttgcaacagtactggagtagcatagcaagctgctgctgctgagtagctagggagtaggagtagataatagtaggcgcgcgtaggatggtgtggaagagctggggcggcgtcgtgtttgcggttgcggcggcggcggcggcgctcctgtgctcctccgatgctgccgatgacgtggtctccgtcagcttctccaagacccctccccgcgtctccaggtcggcgtcggccgtcttcaccttccaggtcctgcacaccaatggatcaggcccgtgccaggattgcctcatcacctgcaaggtcactcctcactttccacctgcctgcttccattccatgcttttctagctcatctgcttcatcacgcactcgcattgcatatattccatgtctcggcattaatttcgacatccatcatttttattttccaaatgtgtgcgtgcggtgctacctaggagtagcttctgtctgaaatgaaatctcttttttttttacagttgctaatgtcatgtgttgcctcgagttatctccctaggtagtggtagtggagtactcctactccagtggaatgcatagagagaatcaagtgtaaaaatgtggtttcagttagcatatgccgtgcctttttgtggatttgggtgcctggtcccctgaaagagcaattagtcagttaataatagcctcatagtagatgcattcatcgatgcatcaatttctccggtgatactactagtatagtactaccatgacaaggatagatcatagatgttggtcagattactatataggtaggtggaaatgtcttggcggattagaccatttgatttgcaacaagccaacaagttgtggtacagcattgtagtagtagtatcaaggtttttttttttgtaggaaggaggttaattaagtgagaaaaaaggtaggagtattgaagaagatgcgaatgtaagttggtatttgggtgcatgcgtgaatgcaggtggacggggagagggcgtgggagtgcggaagaaacagcagcagcagcaacgggacagcggtggtgaggtactcgcggctgaaagacggcaaccacaccttggctgtgtgcgcgggtgcgggacgaccaccaacaacaacaacaacaacaacctgcgccacctacgcctgggatgttggttggttcagtaacaacaccctattactattgctagacagtacagtagtagcattttaattaattcccatcctttttacttgtactagtatttgatttgattgttgccgttactagtacagtactcgtacgtacaactccagtaatgtggttaacaggcgggaaccttatagtagtagaaatgaaaatggtttggatgcagacacggttgctccgacggcgtccgtgaaggcggaggcggggttcacgagcggatccaacgtgtcggtgctcgtctccttctccgagccctgccccggcggaggcggattcacctgcaacgccacctactgccatgtactacgagccactagtacactaccacatggagtagtatcattttgttactgaatggaatggaatgtaatacggtattaattggaattttgcatttgcagctgagcgtgtacggtcccgggcgcgtggatccgtcgagtcttcaggtcctccgccctgccctgcaatactccgtccacgtcaccatcccgccggagttgctctatggccgcctcattctcgtcatggccaagggcttctgcaccgatgctgccggccaccacttcatcagaaccgccaactctaccttcaccctgcgcttcggtacgtatacctacactagatacactttcatttgctttgcttgcttgctagtactagtattattcatgatcgatcgagattggatgtactgcagacagacggagcgactcgatgaacatcggcagcagcatccctgagaagctgcttcagatcgagggcgccaccagggtggtggaagccaccaacgacgacaaggacctcagggtatacctctccttcgctgaacccgtcatgaattcttcctcccaaatcctcgccgctctcaccgccaccgatgccattctcacgccaaccaaccgaagcacgctcgggaatcgccgctttggatacctcgtacgttactctaatccactctcactgtcatgtcctagctaatcccactgcttaattgcttgctgggttaacaaccttcattccataccatttccaggttaagaggacatccaacaccgccgttgtcactgtttcctgtgacgggaattccataatcagcagacaaggaactcctgtttcttcttcagagccatacacttttctttacggttagtaagccaatcatatatacagtactactctgctccacttccactcaatccatacgttactttcagttttcaatacgataacacgtgtacaagagaatgtttgttcagataatcaaaggccttctgttaagctggcgacatccactgtcagaacaagttcacgcaacatcccggttttgataaagtttgcaaagcctgtcttcaacttcacttcctctgcggtgcaggtttccgggggcaatctcctcaggcaagaacaaacccatctatccatccatccatatgcatgcatgcagcttcctaataattaaacgaattcgtcgtggttttcagcttccatgaagctagtaagagcatatacacagcgcagatacaggcggttgataatctggtttcggtccacgtcgccgagaactctgctcaggacgttgcaggaaataccaacttaccgtcagatcgtctggaagtgaggcattgtaagggcatcattactacttgctctcttcgttccaaaatacatactccctttgtcccaaaaaaaggcaaaccctaggtttacgtgtccaactttgactgtccgtcttatatgaattttttttataattcgtatttttattattgttagatgataaaacatgattaatactttgtgcgtgacttgtctttttaatttttttcataatttttttgaataagacggatggttaaacattgggcacggaaaccagggtttgtctttttttgtgacggagggagtaaatcttagtaacatgagtctggatacgtaatgtagtagtaattgtcagctagcataagcagagtccatatatgcatgctcgtcaaaacctgaattattaggtagcaatagcagacagatgcacgcacgaactaattgtgtgcatttttactgtgttgagtgcagattctgttcctgcatcatcatcatcgatcgcgatcgtgacgacggtaatttttacagcaaccgcagcattcgccacgctgctgactgtttcaacatcgtcgctactggcatcaggtgtcatccagaggccgccttcttacctcgtatccgagccatcacgaaatctcttggttggtacactacaatcgaattccatagaatcatatggagtaactagcaggtagagcagtaatcgatggcgatgttggtttcagagaatggcgtgccacattcaggtattcgcgctgtcgcgatggctgtcgataaatctgccggtggagtactacgagctgagcaaggggctggagtggagcatcccttacatgcgcctcccatgggaaggcccctctgccgatcctttcgtcggctactccaccatgcccgccatcgcctactccgagatgctcgaccgcaccgctctcgccgccgacgtcctccgccgccctcctgcagctccaggagttgcaatggccatgccgtcgacgtcgccattggacggcaagcctctcaccgccatggagtaccggtatctgttcgagaaccaggacatgaagcccgaggcgcagatcatcatgaagctgcaggatctggacggatggaagtacttcttcaggaacatcttctggctggccgtcatcgctgccgccttcctgctgctgcacgccaccctcctcctctacctcaagctgcgccacaggcacagccacacacacgtcggtgcgctcgtgttccccaggctggagctgatgctcgtcatcctcgccatgccctgcgtgtcccaggcgtcggcggcgctgatccgaggcggcacaacggcggggctggccgtcgggatcgtgctgacgggggtgctaacggcgttcctggtagcgctgctgctgttcctgtcgctgggcgtcaccacggggaggctgctgcagtacaaggaggtgcaccaggaggggcgggagtaccactggtaccaggagattgttcgccggacgctgggacccggcaagcgtggacagtggacgtggaaggaccccgcccgcaccgcctgcctcgtcaagctcggcccgctcttcgaggacctgcgcggcccgcccaagtacatgctctcgcagatcgccggcggcagcggcggcaagcgcgcggcggagcggatcatcgtgtccgacgacgagaacgaggacgccgaggcgccgttcctgcagaagctgttcggcatactgcggatctactacacgttcctggagtcggtgaagcgggtggcgctggggatcgtggcgggcgcgcacgcgtcgtcggaccactcgtcgcgggcgcacgccgtggtggtgctcgccatcgcctccttccagctcttcttcatggtgctcaagaagcccttcatcaagaagcgggtgcagctggtggagatcgtggcggtggcaagcgaggtgttggtgttcgccgcatgccttcggctggtggacagcgggggcagcgccgtggcggaggggagcggggtagggctggccatgctgacggtgttcgcggtggcgttggcggcgcaggtgtgcaacgagtggaacgcgctgtaccggcaggtgcggctgctgagctcggacaggaggtcgttcgtggagggcgcgaaggcggcgtgggtggggctgctgctgctggtgctgccgtcgtcggcgcttggagagcagctggagaagatgaagaagcagcaggagcagccggaggcagtggcactgggtggtggtggtggtggcacggagaggtcgtggctggggcagctgagggagatggccaaggcgagcttcagcaaggagggacagggaggggaggcggaggcgtcggggagcagagcaaagggtgggagccggagcatgtcgtcggtggcgtcgtcgtcggactccaaggcgaagggacccgagaactcgcattcgcagtggagctccaagtccaagggactctacaaggatcttgaggccatcttctccaacaggtagcagatgggtacggcagcagctacaatatatactatgttcttcgtgtatgtatatgtactagtatagcaatcaatcattcaatgtatgcaagacgatcaatccagcgatgaagctggtgatgtccctcttcttccctgtcc</dnaseqindica> 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| External Link(s) |
