Difference between revisions of "Os06g0104300"

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(Created page with "{{JaponicaGene| GeneName = Os06g0104300| Description = Similar to Pectinesterase-like protein| Version = NM_001063085.1 GI:115465901 GeneID:4339854| Length = 4463 bp| Def...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0104300|
 
GeneName = Os06g0104300|

Revision as of 20:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0104300

Description

Similar to Pectinesterase-like protein

Version

NM_001063085.1 GI:115465901 GeneID:4339854

Length

4463 bp

Definition

Oryza sativa Japonica Group Os06g0104300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:296316..300778

Sequence Coding Region

296681..296789,296903..297105,297348..297426,297512..297877,298590..298956
,299235..299373,299461..299731,299849..299958,300567..300704

Expression

GEO Profiles:Os06g0104300

Genome Context

<gbrowseImage1> name=NC_008399:296316..300778 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:296316..300778 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctgctgcggcggcgctcttggccttcgtcgccgtcgccggcgccttggttgcgcaggccaccgacccctacgtcttcttcgactgggacgtctccttcatcaccgcttccccgctaggccttccccagaaggttatcgcaatcaacaagcagttccctggccccgtcatgaacctcaccaccaactacaatgtggtcgtcaatgtgctcaacagcttggatgagccattactcatcacttgggatgggatccagcaaagaaagaattgctggcaggatggtgttcttggcacaacctgccccatacctccaggttggaactggacctacaatttccaagtcaaggaccagattgggagcttcttttacttcccaccccttagcctgcagcgtgctgctggtggtttcggaggtattactgtcaacaaccgcgccgtcatttctgtcccattcgacacaccagatggagatatcaccttgttcattggggactggtacaagaagagccacacggacctgaggaagatgctcgatgatggaaaagagctcgggatgcctgatggagttctgatgaatggcaaggggccgtataggtacaatgattccctcgtccctgctggcattgaacatgagactatcaaagttgaaccaggaaaaacataccgtttccgtgtccacaatgtgggtatatcgacgagcttgaacttcaggattcagaaccacaatttggcccttgttgaaactgagggatcatacacaatgaagcagaatttcacaaatcttgacatccatgtgggacagtcctactcatttttgatcaccatggatcagaatgcaagcagtgactactacattgtggccagtgctaggtttgttaatgaatcactgtggaccaaagttaccggtgttgcaatcttgcagtattcaaattcaaagggaaaagcttctggccctcttcctgatccaccaaatgatgagtacgacaaaactttctcaatgaaccaggcacgctccatcaggatgaatgtgagtactggtgctgctcgtccaaatcctcaaggttcatttcactatggctctatcaacgtcagccaggtttacaagctcaggaatgaaccacctgttactatcaacgggaaaaaacggactacactgagtggtatctctttttccccacctgatacccctatgaggttggcggatctctatgacaagaaaggagtgtacacgcttgacttccctactatgccaattgatggaccgccagtgatgaaaacttctgtcattaactccacatacaagaatttcttggaaattgtatttcagaacaatgacacgaaagtccagacctaccatatcgatggatatgcattttgggttgtagggatggactatggtgagtggactgagaatagccgtgggacttacaacaagtgggatggtgtttctcgttgcaccacacaggtattccctggagcatggactgctgtgatgctgtcacttgacagcccgggtttttggaacgtacgcaccgaaaatctggacacatggtatcttggtcaggagacatacatcagggtggtggatccagatggaggctataatgtcactgagatggtggctccagataacatgctctactgtggcctcctcaaggataaacagaaggctcagaagcctcatggttcatcaagttcatcatcctctgctgcatcaccaaaccgctattggcttgcagttgtggtgtctctggtagcggcggtgttcgtccaatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAALLAFVAVAGALVAQATDPYVFFDWDVSFITASPLGLP QKVIAINKQFPGPVMNLTTNYNVVVNVLNSLDEPLLITWDGIQQRKNCWQDGVLGTTC PIPPGWNWTYNFQVKDQIGSFFYFPPLSLQRAAGGFGGITVNNRAVISVPFDTPDGDI TLFIGDWYKKSHTDLRKMLDDGKELGMPDGVLMNGKGPYRYNDSLVPAGIEHETIKVE PGKTYRFRVHNVGISTSLNFRIQNHNLALVETEGSYTMKQNFTNLDIHVGQSYSFLIT MDQNASSDYYIVASARFVNESLWTKVTGVAILQYSNSKGKASGPLPDPPNDEYDKTFS MNQARSIRMNVSTGAARPNPQGSFHYGSINVSQVYKLRNEPPVTINGKKRTTLSGISF SPPDTPMRLADLYDKKGVYTLDFPTMPIDGPPVMKTSVINSTYKNFLEIVFQNNDTKV QTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGF WNVRTENLDTWYLGQETYIRVVDPDGGYNVTEMVAPDNMLYCGLLKDKQKAQKPHGSS SSSSSAASPNRYWLAVVVSLVAAVFVQ</aaseq>

Gene Sequence

<dnaseqindica>3990..4098#3674..3876#3353..3431#2902..3267#1823..2189#1406..1544#1048..1318#821..930#75..212#tttccttcccacacgcgcacacacacagacagacaagaggagtgagggggaagaagtgcttgacttcaccaccaatggcggctgctgcggcggcgctcttggccttcgtcgccgtcgccggcgccttggttgcgcaggccaccgacccctacgtcttcttcgactgggacgtctccttcatcaccgcttccccgctaggccttccccagaaggttcttcttcttcttcttcttgctatactacttctgagcactactagtaatagtgttgtgttacaaatcaaatcaatccatggaatgcctccaaagcttccatcttgcttcctccatggaatccctccctctaagatttcttcttctttttttctccccccgattcgtgcccctcattcctgggacgaatcagatttgctcattgcttacactctgcactaatatattaggggaaacatttgcgtgcgccggaacactagctagtttatttcaagattcattctttcattcgcattcgcatctggattctagacggactggatgtgttcctgttacttcaaaagatatattttacatttttcagactacaactgctccaaccctttgccaaacttctcctatcgctctagcagtagcagatctccgctactccgatccgtccttcccctcgaattgaagcactaatccctcttgcacacgccctagtactagtattactgcctgcctagctctgctcacctctgcttctctttccaactcgcgaatgctagcctccatcttcatgcctgtctctttactaacattatgcctccttttacttgtttcaggttatcgcaatcaacaagcagttccctggccccgtcatgaacctcaccaccaactacaatgtggtcgtcaatgtgctcaacagcttggatgagccattactcatcacttggtcagactcaatttcctcccccattccattatattgttcaacgctcccatgctgacattcactcgcaatataatgtgctgtcaatgtgttgactgacccatgtcttatttcaatcagggatgggatccagcaaagaaagaattgctggcaggatggtgttcttggcacaacctgccccatacctccaggttggaactggacctacaatttccaagtcaaggaccagattgggagcttcttttacttcccaccccttagcctgcagcgtgctgctggtggtttcggaggtattactgtcaacaaccgcgccgtcatttctgtcccattcgacacaccagatggagatatcaccttgttcattggggactggtacaagaagagccacacggtagagagagaaaaaaaaaacctaagcctattttccaggactcatcacatcaatggtcatggtgctgattgtgtttgtcttgtataggacctgaggaagatgctcgatgatggaaaagagctcgggatgcctgatggagttctgatgaatggcaaggggccgtataggtacaatgattccctcgtccctgctggcattgaacatgagactatcaaagttgaaccaggtgattagtcctcccacactttcagcatgataagctaaactagtccttgtacatgttgccaaaaaaactgctcctataagtctatctctctgctgctgctaccagtatttttgaatgtaacattgaattgtacaatgtgttctcactgctatgttggatgaatgaaagtgatagttcatcatcacttccatgacagggccaactaaaatttctttgaacaatgattgcctttgtttattctcatgatttggtaactgactgctcaaactccgcaacaggaaaaacataccgtttccgtgtccacaatgtgggtatatcgacgagcttgaacttcaggattcagaaccacaatttggcccttgttgaaactgagggatcatacacaatgaagcagaatttcacaaatcttgacatccatgtgggacagtcctactcatttttgatcaccatggatcagaatgcaagcagtgactactacattgtggccagtgctaggtttgttaatgaatcactgtggaccaaagttaccggtgttgcaatcttgcagtattcaaattcaaagggaaaagcttctggccctcttcctgatccaccaaatgatgagtacgacaaaactttctcaatgaaccaggcacgctccatcaggtttgtacaaaataactctttcttcttagttgcagaccccgcacaaatgaccaatgtcttattttcctctcatgcaatcctagcctctttaaaagcatgtaccttagaaatggttgacccatcatgtgctgatactttctaatagtcttctttatacccagcatacgctgcaaatttttttttttgctaatgtgatataataatttgtttgtaacttttcttttgctatacctacatctcctaatttgttttcaccttttccttatcatggaccttatgctacttcccataatgtaaattatgtacatttagtcgcattgaattcacaaagatatttcattcaaatatgacttgttttcagattctgcatgggaaacacacttcaaacaaaatacatacatccttttctttgcaaatcaacacttctgtcagtgtacttgggagttttctgcccagacaatctgttcttatgcatacctctaccttttgtattcctttagaaacttcaatttgcttccaatacatatagtgacctctaaatgtttagtagtcattcccagtggttctgtgtctctgctagcatcatctatttataaagtgtaaggttgtctgctacaactcgtgagcaacatagagtctagacatatatcactgtccccaagagtttgcaatatgttgtcctcaacaaaacactttctttctcttttcccaggatgaatgtgagtactggtgctgctcgtccaaatcctcaaggttcatttcactatggctctatcaacgtcagccaggtttacaagctcaggaatgaaccacctgttactatcaacgggaaaaaacggactacactgagtggtatctctttttccccacctgatacccctatgaggttggcggatctctatgacaagaaaggagtgtacacgcttgacttccctactatgccaattgatggaccgccagtgatgaaaacttctgtcattaactccacatacaagaatttcttggaaattgtatttcagaacaatgacacgaaagtccagacctaccatatcgatggatatgcattttgggttgtagggtgagcaatgcttcaaatttgcatttccttggctgtcaatcagcaaacaacctgtataatggatcatttgcattttgccaaccaggatggactatggtgagtggactgagaatagccgtgggacttacaacaagtgggatggtgtttctcgttgcaccacacaggtaactatcgtaggctggccatttctcttgatgaagtccttgtgtttcaggatgctttttaactatgctaatgttcacacccactataatgtttatttatgagctggtggatgcaagatgttaatatttcttcttagtcaagattgaagagatatttatttatctagtcatcgattgctgagatgagcttattgcgtcctgcagttaacaacgatagatactatcacacactcatgttgtaggtattccctggagcatggactgctgtgatgctgtcacttgacagcccgggtttttggaacgtacgcaccgaaaatctggacacatggtatcttggtcaggagacatacatcagggtggtggatccagatggaggctataatgtcactgagatggtggctccagataacatgctctactgtggcctcctcaaggataaacagaagtatgttgctagtattttgcttatgtgctttagagagtactccagctactttgcatttgaccttacaggagtaatgactaatgcttcaactgtttttttttttggtcctctagggctcagaagcctcatggttcatcaagttcatcatcctctgctgcatcaccaaaccgctattggcttgcagttgtggtgtctctggtagcggcggtgttcgtccaatgaaaatatttttcctgttagtgccctgttggctgttgtttgcaaattaggaaactgacagaattcgggtaggtcgaaaaatttgtaggttccatgattcgtgtggaatactgtcattgtgcatcggcaaagtttgtcggaatttaacagagattgtgtaaaccattgcattgagtctgtgtgtcggcacctgcaaggagtggtgcctgagagtgtgttttctcgcatcgatcgacttattagtagagatctggatattgatgattgtcattccatctcaatttagtactactagctagagaagtttgtctctcctgttcctgtctctctgtatgaagttgcagatactataatattttggggcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0104300, RefSeq:Os06g0104300