Difference between revisions of "Os06g0105400"

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(Created page with "{{JaponicaGene| GeneName = Os06g0105400| Description = Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)| Version = NM_001063090.1 GI:115465911 GeneID:4339859| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0105400|
 
GeneName = Os06g0105400|

Revision as of 20:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0105400

Description

Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12)

Version

NM_001063090.1 GI:115465911 GeneID:4339859

Length

4679 bp

Definition

Oryza sativa Japonica Group Os06g0105400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:369273..373951

Sequence Coding Region

369498..369568,369668..369760,369889..369991,370061..370156,370227..370293
,370379..370446,370606..370681,370890..370975,371065..371150
,371337..371409,371490..371735,371845..371937,372045..372119
,372256..372311,372462..372502,372611..372708,372805..372905
,373124..373217,373865..373894

Expression

GEO Profiles:Os06g0105400

Genome Context

<gbrowseImage1> name=NC_008399:369273..373951 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:369273..373951 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcctcctccgccactctcccaagttgcgaagagcgcatgctatcctcggatgcgagcgtgggactgttgttcgtcacttctcatccagcacttgctcctctcttgtaaaggaagatactgtatcaagttccaaccttcatccagagtatgcaaaaaaaattggaggatcagatttttcccatgacaggcagtctggaaaagagcttcagaatttcaaggtctcaccgcaagaagcaagtagagcctccaatttcatgagagcatccaaatatggaatgccaattactgctaatggggtacatagtttgttctcatgtgggcaggtagtaccgtctaggtgtttttcaagtggagcagatttgcctccacatcaggaaatcggaatgccttcactctcccctaccatgactgagggaaacattgcaaggtgggtgaagaaagaaggagataaagtctcacctggtgaagttctttgtgaagtagagactgataaagcgacagtggagatggaatgcatggaggaaggctaccttgctaaaattatccatggagatggtgccaaagaaattaaagttggtgagattattgccgtaaccgtggaagaagaggaagacatcggcaaatttaaggattataaggctccatcatctgctgaatctgcagctccagccgaatcgaagccccaatctgagcccacagaaccaaaaaaggagaaagagcagcccaaggctcctgagccaaaggctacaaagacagaagaatcttttctttcagaggatcgcacattctccagtccaattgcaaggaaattggcagaagacaacaatgtaccactgtcaagcataaaaggtactggccccgatgggcgaattttgaaggcagatattgaggattacttggcttctgtggccaagggtgccaagaaggaaacagcagcagctcctggactaggctatgtggatcttcctaatacgcaaataaggaaggttactgcaaaccgcctgctgcactccaagcaaaccattcctcactactatctgacagttgatactcgtgttgacaaacttattaagttgcgaagtgagttgaatcctctgcaggatacctctggtggcaagaagatatccataaatgatcttgttatcaaggccgcagcattggctcttcgtaatgttcctgagtgtaatagctcttggatgaatgattttattcgccaataccacaatgtgaacatcaatgttgctgtacaaactgaggatggcttgtttgttcccgtaataagggatgctgacaagaagggcctagccactatcgctgatgaggtgaagcaactggctcagagagcaagggacaacagccttaagccagaggattatgagggtggcactttcactgtgtcaaacttgggaggcccttttggaattaagcaattctgtgccatcgtaaatcctccacaatcagcaattttggctattggctcagctgagaagagggtgatccctggagctgagggtcagtttgaagttggttcgtttatgtcagcaacattgagctgcgaccaccgggtcattgacggtgccattggtgcagaatggatgaaggcgttcaagggctacatcgagaatccaacgaccatgttgctgtaa</cdnaseq>

Protein Sequence

<aaseq>MALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVS SSNLHPEYAKKIGGSDFSHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGV HSLFSCGQVVPSRCFSSGADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVL CEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYKAPS SAESAAPAESKPQSEPTEPKKEKEQPKAPEPKATKTEESFLSEDRTFSSPIARKLAED NNVPLSSIKGTGPDGRILKADIEDYLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTA NRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLVIKAAALALR NVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKKGLATIADEVKQLAQR ARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIPGAEGQ FEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL</aaseq>

Gene Sequence

<dnaseqindica>4384..4454#4192..4284#3961..4063#3796..3891#3659..3725#3506..3573#3271..3346#2977..3062#2802..2887#2543..2615#2217..2462#2015..2107#1833..1907#1641..1696#1450..1490#1244..1341#1047..1147#735..828#58..87#agtagcacctccttccccaagaatcgcgcgcgcgcgcctgcctcgtcgccggcggccatggcgctcctcctccgccactctcccaaggtctctcctctccattcccccctccctctctcactctccccgtctctctgtctctcgcgtcgtcgtcgttgttggcaccgcatcccggtttgttggaattggcgctgctccgatcgatccgttccggcatgcgccgatgcccccggtttgcccaccacctgcggctgcgctcgcaattgctgcgcctgagggctgaggcttcttcttgggtgtgccaatctattctctcgcgtttacctaccttgtccttcctgcccttttattttacaagttggattacaagagtacaattatttctagcgctgatgcgcactgtgatcacgggatttgtttcaactgttcaaaatgtccccttttttttttcagagttgcacaaatcctctctcggtaatcacgccgctacttttaaacccattctattcatcttactcaactgctatcatgtacaaatcgatctaggtcattgtggaattacaccaaagcgcatgtctggcttgctctatcttcatgggcctctggtttttatcatttatgtcaaacacaacaggattatatatgcttgcatttcgtctatgaacattcattctgttattatacatatatggtttgcatatgctcatagttgcctgcacaatctactcacacagttgcgaagagcgcatgctatcctcggatgcgagcgtgggactgttgttcgtcacttctcatccagcacttgctcctctcttgtaaaggaagatagtatgtgttctctctttattcctttctgatgtctcaataaacttttgttgttcagaaagaaaaaggaacttcctttcgtcatacaaatatttgggcatcactcgccagttttctagtgcttcaacacagaatattttggtcttagtgaaacatttgtaatgaaaatggtattttcttcctctacatgtattgcctattatagcgacttcctgttgcagctgtatcaagttccaaccttcatccagagtatgcaaaaaaaattggaggatcagatttttcccatgacaggcagtctggaaaagagcttcagaatttcaaggttatgcggttctaatcaagctctcaccctttctaaatttgaatgcttaagcatttgttctaattctagcttgttgtcctatctttcattccacaggtctcaccgcaagaagcaagtagagcctccaatttcatgagagcatccaaatatggaatgccaattactgctaatggggtacatagtttgttctcatggtatgtactttccttttgtgattttgttctgaatttttctttagccatacgtttgttctggtttaaatagctgagagtccatattcactgttcgttatttatcatcagtgggcaggtagtaccgtctaggtgtttttcaagtggagcaggtaccttctctaaagtcatgacacctatgtctaacactatgtttgtgttatagattcagatccttctgttatagcattatgcccaactttaagttatatcatagttaatatcttccttcggagttttcaatagtattgtttactgtccagatttgcctccacatcaggaaatcggaatgccttcactctcccctaccatgactgaggtacaatactcaacagctgaaattgaataaataaataaaatcatggcatcatggcaaagagaaaattaaaggatgagcagtgtcatgtatctcttgagttgcctttatcatgtcaaacttattaaattgcctgtagggaaacattgcaaggtgggtgaagaaagaaggagataaagtctcacctggtgaagttctttgtgaagtagagactgtaagttactttcttaatgtgcacaccaagacttgatttaatttccctactttatttaattaaggagcaacagcagcttaaccatcaatcacatttatggtgattaggataaagcgacagtggagatggaatgcatggaggaaggctaccttgctaaaattatccatggagatggtgccaaagaaattaaagttggtgaggtacatattcttgatttagaaaagacactttttccctccatttagcccatgttctgtgctgatatgaacttgagttgccttcaatatttacacattatttgttaaccagattattgccgtaaccgtggaagaagaggaagacatcggcaaatttaaggattataaggctccatcatctgctgaatctgcagctccagccgaatcgaagccccaatctgagcccacagaaccaaaaaaggagaaagagcagcccaaggctcctgagccaaaggctacaaagacagaagaatcttttctttcagaggatcgcacattctccagtccaattgcaaggaaattggcagaagacaacaatgtaagcttctaatattttagctatccatacggtttccaaagaacgcagtttttaattttgaaaccttgtttcctaaacaggtaccactgtcaagcataaaaggtactggccccgatgggcgaattttgaaggcagatattgaggattacttgggtatgcaattgttctgtatttttattcatgctgaaaaaacatcatcttgatggtggccttcagaattaagatgcttatatataagagccagattaaagcatgataagtaatgaatggtgatagttttacctataaagagtagagtaagtgggttcggtaatctaatgatatttatgcttaatgaagcttctgtggccaagggtgccaagaaggaaacagcagcagctcctggactaggctatgtggatcttcctaatacgcaaataaggaaggtaatatcattgccacttaatttctttcaaggtttttgttgctgttggtgctctacttctattaacagtttctgatattatttcgtcaggttactgcaaaccgcctgctgcactccaagcaaaccattcctcactactatctgacagttgatactcgtgttgacaaacttattaagtatggtttcaatcaaaactttgttcaagcaatttagtattttatcaacctgtacccaagaacatattttgtgaacctctggttgattactagatgaaccatttgctcttttttttttttggggggggggaggcctcgtttttgtttgcaccatatttttctatagggttacttgacaagcaaaattcttgattaatttatgttccaggttgcgaagtgagttgaatcctctgcaggatacctctggtggcaagaagatatccataaatgatcttgttatcaaggtaaattttgatgtgatactcttctttcctcaaggcttagttaagtttagacttgatcaatgcatgcgcaaatcattcctgttcagacaaacaattttcagagttactattttgcatgagtggtaggatgttttacctaaattattgtccaatatgcaggccgcagcattggctcttcgtaatgttcctgagtgtaatagctcttggatgaatgattttattcgccagtaagttatgagtaattgatcattgagactgggatgttcactactactacttatgatgtgatgtgctacatataatctcatgcagataccacaatgtgaacatcaatgttgctgtacaaactgaggatggcttgtttgttcccgtaataagggtatgccatttatttccatggtttttttaaaaaaattattcagcatctttaacttgtattgtttttacaggatgctgacaagaagggcctagccactatcgctgatgaggtgaagcaactggctcagagagcaagggacaacagccttaagccagaggattatgaggtataggccgaatatatatttgattcgatagtatttttcctttgacaatttggatgcaatgtcttgcagggtggcactttcactgtgtcaaacttgggaggcccttttggaattaagcaattctgtgccatcgtaaatcctccacaatcagcaattttggctattggctcaggtaacatgctgcctaacaatcacgccatcaggatctgcttatctatcatgtctaatggtctatgctcgcttgaagccattttgttatgatgtttacttaccacgtctagaaatttgttgtgtgcacagctgagaagagggtgatccctggagctgagggtcagtttgaagttggttcgtttatgtcagcaacattgagctgcgaccaccgggtcattgacggtacgttttggatcaattggcactacttgttgcttgctatctgggggaagggattcaccatagcttgctgacggattgcccttttctattttctggcaggtgccattggtgcagaatggatgaaggcgttcaagggctacatcgagaatccaacgaccatgttgctgtaaatgaggatgacggggagagttattttttgtaggttttcacaaataaggctcacaataacggtgtcttcgttcttttcattgttttacactgtataacctcggcacggccccatgaggtcttgaaaccaaagagcaaacatacataggagtcagcacagcatcccttgtcatctctgtaaatgcatttttatcctgagctaaatcacaatttacagcgcgtagtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0105400, RefSeq:Os06g0105400