Difference between revisions of "Os06g0115400"

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(Created page with "{{JaponicaGene| GeneName = Os06g0115400| Description = Similar to Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment)| Version = NM_001063147.1 GI:115466025 Gen...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0115400|
 
GeneName = Os06g0115400|

Revision as of 20:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0115400

Description

Similar to Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment)

Version

NM_001063147.1 GI:115466025 GeneID:4339922

Length

2623 bp

Definition

Oryza sativa Japonica Group Os06g0115400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:863347..865969

Sequence Coding Region

863806..864045,864130..864153,864246..864272,864448..864566,864680..864851
,864914..865108,865179..865388,865738..865926

Expression

GEO Profiles:Os06g0115400

Genome Context

<gbrowseImage1> name=NC_008399:863347..865969 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:863347..865969 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgttcgccacactggtgggagtgggaggcctatcgcctgccctcttctccccctcccgccccctctcctgctccagctccacctccgtctcggccccgttcatcctccgcgccggcggcggcggcgacgcccggcggcatggcctccgacgcctcgtcaccccactgagagggagcgcctgcaggggagagagtacgaactcacgtgtactccagtgtgccaatgaggctaatgtggtgaccgaggatgacattgtgaacgatggtatcgatgatgaaaccgcttccgatgctgaaatggatgaggatgctgaagcaaatggtgatgagtcgtcaggcactgatgaagatgcttctgtctcctggatagagcagcagcctcttccttatccttcagatgccctagagccatacatcagcaaggagacggtggaacagcactggggagttcatcagaacattcacgtcgagaggctcaatggcatgattggtggcagtgagtgggaggggatgtcgctggggcagatgatgctatcctccttcaatgagggcagggaggcaccccatccccccttcttccatgctgcacagatatggaaccatgatttctattggcgatctatgcaacctggtggcgggggaaaacccccagaacgccttttgaaatttatcaacagggactttggatcctatgatggcatgattcgacaatttatggatgctgcatcaactcaatttggttctggatgggtttggctttgttacaaaacaagcaagttgcctcatgtgaaatcaagaagcccaatcccatctgataattatggtagactggtcatctcaaagtctccgaatgccatcaatcctcttgtctggggtcactctccactccttgcaattgatctttgggagcatgcatactacctggattatgaggatcggagatctgactatgtctccacatttctagagaagcttgtgtcatgggaaactgttgagtccaggcttaagaaggccgtacaacgggcagtagaaagagatgaatatgttagcacaaagcatataaggaagcaacttttagctcgggcaaagagccaaatcagagctatgcctcagcaggtcaatggggatgcaagagagcagaccagcggtcaagagaagtccctaggggtgtga</cdnaseq>

Protein Sequence

<aaseq>MAFATLVGVGGLSPALFSPSRPLSCSSSTSVSAPFILRAGGGGD ARRHGLRRLVTPLRGSACRGESTNSRVLQCANEANVVTEDDIVNDGIDDETASDAEMD EDAEANGDESSGTDEDASVSWIEQQPLPYPSDALEPYISKETVEQHWGVHQNIHVERL NGMIGGSEWEGMSLGQMMLSSFNEGREAPHPPFFHAAQIWNHDFYWRSMQPGGGGKPP ERLLKFINRDFGSYDGMIRQFMDAASTQFGSGWVWLCYKTSKLPHVKSRSPIPSDNYG RLVISKSPNAINPLVWGHSPLLAIDLWEHAYYLDYEDRRSDYVSTFLEKLVSWETVES RLKKAVQRAVERDEYVSTKHIRKQLLARAKSQIRAMPQQVNGDAREQTSGQEKSLGV</aaseq>

Gene Sequence

<dnaseqindica>1925..2164#1817..1840#1698..1724#1404..1522#1119..1290#862..1056#582..791#44..232#aatcttatcgtctcctcgaagctttctcccaaactgctcgtccatggcgttcgccacactggtgggagtgggaggcctatcgcctgccctcttctccccctcccgccccctctcctgctccagctccacctccgtctcggccccgttcatcctccgcgccggcggcggcggcgacgcccggcggcatggcctccgacgcctcgtcaccccactgagagggagcgcctgcagggtaaactgtcgcctcctcctcctcagcttagcatttctagttggtagctcgagctgactgattggcgctgctcgccgttctttgtttcctgtgtattattttggataagtcacactgttacgtgttaattcaccagacttatcaagcgagtagctcttctttatggattcactgactcaagaaaatgcattttcatttctgtagatatttgatttgtcatgacattttcggttggatgtgtgaaatacatttattatgcaccatttctagaataaaagaatcctctccagttctgtagacgattaatttgatgtggaagaatgcatatatctatgtattatttcaacagggagagagtacgaactcacgtgtactccagtgtgccaatgaggctaatgtggtgaccgaggatgacattgtgaacgatggtatcgatgatgaaaccgcttccgatgctgaaatggatgaggatgctgaagcaaatggtgatgagtcgtcaggcactgatgaagatgcttctgtctcctggatagagcagcagcctcttccttatccttcagtaagtacacaaataccaatttgtggttttgcacagagtagtagtgacaactgtgtgatgggaaatgtaggatgccctagagccatacatcagcaaggagacggtggaacagcactggggagttcatcagaacattcacgtcgagaggctcaatggcatgattggtggcagtgagtgggaggggatgtcgctggggcagatgatgctatcctccttcaatgagggcagggaggcaccccatccccccttcttccatgctgcacaggtatcattccgtatgctgagctgtatgtcctccatatgactaattactggacattcttttagatatggaaccatgatttctattggcgatctatgcaacctggtggcgggggaaaacccccagaacgccttttgaaatttatcaacagggactttggatcctatgatggcatgattcgacaatttatggatgctgcatcaactcaatttggttctggatgggtttggctttgttgtaagtgatgtacagatgcttagcgacatacttattagcttcatcgtaccagtttcaaaatttgcatatgttggtgtgatgaactgaactcttttttctgtaactctctccagacaaaacaagcaagttgcctcatgtgaaatcaagaagcccaatcccatctgataattatggtagactggtcatctcaaagtctccgaatgccatcaatcctcttgtctggggtcactctgtgagtattaacttgaaacacttaccctacattgctatgccattcttctgtcatgattcgtatgcaatggctaaagttgaaatgcaaagcatacgcctggcactgtatgtctgctggtttttttttgccgtatgcatatccagcagggatctcatgaggctatttctttttgcagccactccttgcaattgatctttgggaggtatgaatattgcaatcaggtttctctttcttttcctggcatttttattaataaacaattatactaacaaaacctattactttgggcaacagcatgcatactacctggattatgaggttagatgacaagtgatgcttacatttagtacttaaaaaaaacattttgttttacttattttgttcatggctatatctttgcaggatcggagatctgactatgtctccacatttctagagaagcttgtgtcatgggaaactgttgagtccaggcttaagaaggccgtacaacgggcagtagaaagagatgaatatgttagcacaaagcatataaggaagcaacttttagctcgggcaaagagccaaatcagagctatgcctcagcaggtcaatggggatgcaagagagcagaccagcggtcaagagaagtccctaggggtgtgacaacggagccaagtaagctacggcaggtgggtcatgttgccgagttgaaccatggggatgatggacttgtaacacaggaagctagagcagctgatcaatcttcaaggtagcagtatccgaagattgtatgcacatactgtgggcaaccctttgcttaatagcaaatgttgtcgtacaggcagcttcacagtttctgtcgctgtcgatgaatagatctgtagttcgtgacactgcagcaaatacaagtcacaaacccagagtcatgtgcgagctaaattttgataggagtaattaggtttgagtatcatagagatagacaagaattagtcacttggagcaaatgagcctgacatcttgtattcctgtgctgtccatgtttgaatcctgaacttctgattgacaaaccaaagaaaattgtagttccgaagaaatacatcactggtgtcagtaatgtttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0115400, RefSeq:Os06g0115400