Difference between revisions of "Os06g0131500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0131500| Description = Glycoside hydrolase, family 17 protein| Version = NM_001063231.1 GI:115466193 GeneID:4340010| Length = 2167 bp| Def...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0131500|
 
GeneName = Os06g0131500|

Revision as of 20:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0131500

Description

Glycoside hydrolase, family 17 protein

Version

NM_001063231.1 GI:115466193 GeneID:4340010

Length

2167 bp

Definition

Oryza sativa Japonica Group Os06g0131500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1690886..1693052

Sequence Coding Region

1690909..1692180,1692721..1692798

Expression

GEO Profiles:Os06g0131500

Genome Context

<gbrowseImage1> name=NC_008399:1690886..1693052 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1690886..1693052 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaccatttccaacgttgtcacgaacacttattgtgcttctcccactccactgctccgccggcgagccaccgccatggcgcttcgtgtacagctcgtcctcgccgtcgccgtggttgtgccggcgttgggggtggcggcgggtggtgctaccttgggggtgaactatggccaggtcgccgataacttgccgccgccgcaggcggcggccatgctcctccgctcgctgaacgccaccaaggtgaagctctacgacgccgacgcgcgcgttctcagcgcgttcgctggctccggcgccgacttcaccgtcggcctcccggaccgcctcgtcccgcgcctcgccgccgacccgtccgccgccgcggcgtgggtgcgcgccaacatcctgccccacatcccggcgacgtccatcaccgccgtcaccgtcggcaacgaggtgctcaccggcaacgacagcgccatgctccggtcgctcctcccggcgatgcagtcgctccacgccgcgctcgccgcttgcaacctcacctcgcgggtggtcgtcaccacggcgcactccctcgccgtgctctcctcctcgttcccgccgtcctccgccgcgttccggcgcgagctcctcccgtacatggcgcccctcctcgcgttcctcgccaagaccggctcgccgttcctcatcaacgcctacccgtacttcgcctacaagggcgacccggagcacgtggacctcaactacgtgctgttcgaggccaatgccggcgtcggcgacccggcgacggggctgcgctacgacaacatgctgcacgcgcaggtggacgcggtgcgcgccgcgatctgcagggcaaactacggcaaggcggtggagatccgggtgtcggagaccgggtggccgtcgcggggcgacgacgacgaggccggggcgacgccggagaacgcggcgaggtacaacggcaacctgatgcggctggtggcgcaggggaaggggacgccggcggcgcccggcgaggcgctgcaggtgtacgtgttcgcgctgttcaacgaggacatgaagcccggcccagcgtcggagcggcattacggcctgttcaagcccgacggcacgccggcgtacgacgtcggcgtgaaggctccgacgattggcggcagctggaaggggagagccaatggcactagcggcggcggcgccggcgggctggtcgtggcggaagggcccggaggggcagacggtgcagggcagggcactggattctacaccgtgtcagcagcagcacacaaggtgaagaggtggcggtgctgggaaagcttgttcgcaaccgttgttctagtcatgtcgtccggcctgtgttggtcatga</cdnaseq>

Protein Sequence

<aaseq>MATISNVVTNTYCASPTPLLRRRATAMALRVQLVLAVAVVVPAL GVAAGGATLGVNYGQVADNLPPPQAAAMLLRSLNATKVKLYDADARVLSAFAGSGADF TVGLPDRLVPRLAADPSAAAAWVRANILPHIPATSITAVTVGNEVLTGNDSAMLRSLL PAMQSLHAALAACNLTSRVVVTTAHSLAVLSSSFPPSSAAFRRELLPYMAPLLAFLAK TGSPFLINAYPYFAYKGDPEHVDLNYVLFEANAGVGDPATGLRYDNMLHAQVDAVRAA ICRANYGKAVEIRVSETGWPSRGDDDEAGATPENAARYNGNLMRLVAQGKGTPAAPGE ALQVYVFALFNEDMKPGPASERHYGLFKPDGTPAYDVGVKAPTIGGSWKGRANGTSGG GAGGLVVAEGPGGADGAGQGTGFYTVSAAAHKVKRWRCWESLFATVVLVMSSGLCWS</aaseq>

Gene Sequence

<dnaseqindica>24..1295#1836..1913#atgcatgcacgcgctttttgtttatggctaccatttccaacgttgtcacgaacacttattgtgcttctcccactccactgctccgccggcgagccaccgccatggcgcttcgtgtacagctcgtcctcgccgtcgccgtggttgtgccggcgttgggggtggcggcgggtggtgctaccttgggggtgaactatggccaggtcgccgataacttgccgccgccgcaggcggcggccatgctcctccgctcgctgaacgccaccaaggtgaagctctacgacgccgacgcgcgcgttctcagcgcgttcgctggctccggcgccgacttcaccgtcggcctcccggaccgcctcgtcccgcgcctcgccgccgacccgtccgccgccgcggcgtgggtgcgcgccaacatcctgccccacatcccggcgacgtccatcaccgccgtcaccgtcggcaacgaggtgctcaccggcaacgacagcgccatgctccggtcgctcctcccggcgatgcagtcgctccacgccgcgctcgccgcttgcaacctcacctcgcgggtggtcgtcaccacggcgcactccctcgccgtgctctcctcctcgttcccgccgtcctccgccgcgttccggcgcgagctcctcccgtacatggcgcccctcctcgcgttcctcgccaagaccggctcgccgttcctcatcaacgcctacccgtacttcgcctacaagggcgacccggagcacgtggacctcaactacgtgctgttcgaggccaatgccggcgtcggcgacccggcgacggggctgcgctacgacaacatgctgcacgcgcaggtggacgcggtgcgcgccgcgatctgcagggcaaactacggcaaggcggtggagatccgggtgtcggagaccgggtggccgtcgcggggcgacgacgacgaggccggggcgacgccggagaacgcggcgaggtacaacggcaacctgatgcggctggtggcgcaggggaaggggacgccggcggcgcccggcgaggcgctgcaggtgtacgtgttcgcgctgttcaacgaggacatgaagcccggcccagcgtcggagcggcattacggcctgttcaagcccgacggcacgccggcgtacgacgtcggcgtgaaggctccgacgattggcggcagctggaaggggagagccaatggcactagcggcggcggcgccggcgggctggtcgtggcggaagggcccggaggggcagacggtgcagggcagggcactggattctacaccgtgtcagcagcagcacacaaggtaattgattgattgattaattaattaattataattacattttgcaaccgcataattacttcattgtttggttacttttttttttgttattagtgtggttcttgattgaatgaattgtgattgagtttggtacaaggaaagtatagtttaagtatgcagtgttgtgtcggttcagacgttcagttgatgctgcgctagctagttgctttgcagtgcttctgttgctaatcaattaaatcatcaatatagtctaattagtatgtgtaacaagtttggtatgcacgtacaaaaccaagttttaaaattgcaaagaggggaaaatgctgctgtgctagctcccagatcatactcctactttgctattccatacccaaaaaaaaaaaagatttgctcatcaagtgagtaatcatgcttggcactagctagtaatcaatcaaaaggttagctacctgctgtgacagtattggagattatactagccctcctttacaagtaatgctttgtgtcacacactttatcttcatgttccttttttcataggtgaagaggtggcggtgctgggaaagcttgttcgcaaccgttgttctagtcatgtcgtccggcctgtgttggtcatgacctgaagagttgaagatgttcatgaagaattgaagatgcagtagaggaggagatcgatctgcagcatttgcagacaaaggagaaatgagcttgaacaaaaacgccattgattcaattgattcttgtgttttcgctgtcctccgattggtgttggttgatgtgtagtttgtgtactgtaaggaagagagatgtaagggacattacatgatacactggattattaattagttcagattcagatttctgaaaggatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0131500, RefSeq:Os06g0131500