Difference between revisions of "Os06g0134400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0134400| Description = Conserved hypothetical protein| Version = NM_001187656.1 GI:297724442 GeneID:9266746| Length = 3545 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0134400|
 
GeneName = Os06g0134400|

Revision as of 20:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0134400

Description

Conserved hypothetical protein

Version

NM_001187656.1 GI:297724442 GeneID:9266746

Length

3545 bp

Definition

Oryza sativa Japonica Group Os06g0134400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1843992..1847536

Sequence Coding Region

1844170..1844250,1844365..1844403,1844519..1844646,1845067..1845277,1845351..1845531
,1846247..1846624,1847205..1847410

Expression

GEO Profiles:Os06g0134400

Genome Context

<gbrowseImage1> name=NC_008399:1843992..1847536 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1843992..1847536 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccaggacagcagggcgggagcgggacccgtgtgaggatgaggaggtacgagtgtacagcgattctcgtgggtatttcgcctccggggggcgcgatgttgatgtcgggccgttcccaacctccgatgaactctacgccgcactcgaccaccactatcacctccggtcgaagccctgtgatccagccccgctgccgacacagtgtgagggccttttgagaggtgcatctgagcctgaatctgcacaggcactgcaggaaccagatgttttgtccgtgggggagcttcttggcgctatagcattgaaagaaccaattatttccagtccctcttcctccccacaggcagtaccagaagacaacattgacgctgtaccatcagggtgctgcctttcctcatcccctgggtcagtcatttgggttcacaaacctcctgaaggccgccgcgggtcataccacattcgaatggatcgtagtgggctgttccacacgtatcctgatatgggtggtccatttctcagcttaaatgaagctcaagacgctttcactagccatcttaacatcctatatcctccattaaagtttgaggagcgggatggggagtctattgtggacatgatggtacgcaaaatcctttattttcctgatggaactaggaggaggtactccaaatcacaagtaacgcaggatgtgcataatgatatgcgccaattggctcgggtgatattagacatgtataatgacgatcacagtcttttagggggtcttgcatacgagctcaaagatgtcattcactttcaaccaattatggagagctgtacgtggtttgaccatttaaatttcacggcattgaccaaaggagataatgaattggattatcaaattcatctgttctttgctgaattgatgtgtttggtaggacaaaaggattatattgtcacttgttgctgtgcacttaaatctgatgacaatggtaattgctataactgcaagcttcagaatgttaatttgaagcacccaaatgatactaaccaatatgctggtggacatgagtatctttgtggaatttatgacaccgaagagatgagcgagtctgaagatgaagaaaaagaggagcagaggataagaaaactttacgaggatcttgaggaaccaggtttgcatgaaaaactttttggtgatgtagaggaaacaggtttacaggaagaactttttggttga</cdnaseq>

Protein Sequence

<aaseq>MASRTAGRERDPCEDEEVRVYSDSRGYFASGGRDVDVGPFPTSD ELYAALDHHYHLRSKPCDPAPLPTQCEGLLRGASEPESAQALQEPDVLSVGELLGAIA LKEPIISSPSSSPQAVPEDNIDAVPSGCCLSSSPGSVIWVHKPPEGRRGSYHIRMDRS GLFHTYPDMGGPFLSLNEAQDAFTSHLNILYPPLKFEERDGESIVDMMVRKILYFPDG TRRRYSKSQVTQDVHNDMRQLARVILDMYNDDHSLLGGLAYELKDVIHFQPIMESCTW FDHLNFTALTKGDNELDYQIHLFFAELMCLVGQKDYIVTCCCALKSDDNGNCYNCKLQ NVNLKHPNDTNQYAGGHEYLCGIYDTEEMSESEDEEKEEQRIRKLYEDLEEPGLHEKL FGDVEETGLQEELFG</aaseq>

Gene Sequence

<dnaseqindica>3287..3367#3134..3172#2891..3018#2260..2470#2006..2186#913..1290#127..332#aatagtcacttgtgttggccacttcgccttgcgccatttcgattccaccaagccctagtccccgccacgccaccgtccgccggcaacgcccccgccgccggccggcggccggcgccatccccatccatggcgtccaggacagcagggcgggagcgggacccgtgtgaggatgaggaggtacgagtgtacagcgattctcgtgggtatttcgcctccggggggcgcgatgttgatgtcgggccgttcccaacctccgatgaactctacgccgcactcgaccaccactatcacctccggtcgaagccctgtgatccagccccgctgccgacacagtacgaacaccacctcaaccctcctccctcctccctatctttctctgtcgatgaacaaggttgatgaaagggcttgcatttggattcaatcctattatttatcatttatgtttctgaggattgatggttccccagacactttctataatgaggtgatgatcaatcacgagacaaattgcacacccttcttatatttggggaggggaggggaggggtgggaatgtaggatactcgatgaaagtcattccttttgtcggtttagaggggaggggaggggagaggcaggatacttgaattccttttgtcggcttatatatagttaaaaatagaactaacggcactataaattggtgtattacataggttcacttctactaaactgatgccgcaattcggtaaaaggctatatcttttcgagtcattttagaaaacagatcaatatttcctagtatgttaacctggcatttgtgcaatggtcattctggaatatcgactttgtaagatacttttattgtactaattgatcgaatattggctttgcaagatactttgttgtactaattgatcttgttcactgcaggtgtgagggccttttgagaggtgcatctgagcctgaatctgcacaggcactgcaggaaccagatgttttgtccgtgggggagcttcttggcgctatagcattgaaagaaccaattatttccagtccctcttcctccccacaggcagtaccagaagacaacattgacgctgtaccatcagggtgctgcctttcctcatcccctgggtcagtcatttgggttcacaaacctcctgaaggccgccgcgggtcataccacattcgaatggatcgtagtgggctgttccacacgtatcctgatatgggtggtccatttctcagcttaaatgaagctcaagacgctttcactagccatcttaacatcctatatcctccattaaagtaagatacctgcatatcctctttttatttccatgtgcttggtatgcgattttatatctacaaatagaacaatgccatgctaaggtggataaaatttgccaagaaacaattttaggcaacttgattgcacttgttttcacctgagaatacttggaatagaagaaaatttgcaaagtaagacctgattgcacaagttttcatccaagaatattttaatttcgcttgcagcattccagtgtgtacagttaagtatagcttatatcgcacctagtgccttagatgctgaacaagactgattgtcagtttgccacaagaattagtcaattcactggtaacaacagggcaaaaacaccagtctgtgttaggaatttaaatagggaaatgctttaaagattgataaatctaaatccaatagccatgcacaccttatctacctcgaaactagttaagttagttatgcgtaattttaaatgggtgtgcctcttttctgttgtcgactaccagaaactatgctagtgttttgttgtttcatatgtatattaaaacttctattaaacactctttacacaaactcctaagcctcaactcgctaaactgttggtacattttgctatctaaaaattacctaacaatatatctgcaaccccctattattttttttacctatagttcacttcaccttatactaataatgggttgttctgatttgagctaggtttgaggagcgggatggggagtctattgtggacatgatggtacgcaaaatcctttattttcctgatggaactaggaggaggtactccaaatcacaagtaacgcaggatgtgcataatgatatgcgccaattggctcgggtgatattagacatgtataatgacgatcacagtcttttaggggtctgttctcccgatctctagcgttactatcccatcattcttattgtattctgattcttaattctattttcagggtcttgcatacgagctcaaagatgtcattcactttcaaccaattatggagagctgtacgtggtttgaccatttaaatttcacggcattgaccaaaggagataatgaattggattatcaaattcatctgttctttgctgaattgatgtgtttggtaggacaaaaggattatattgtcacttgttgctgtgcacttaaatctgatgacaatggtaattgttcccttgtattcagttaacttttatggggttggttcacaatatctctatactcatgtagttttgagaaacattggctatgtatgtctacaatattatatattgcattctatgtcgtttgcatcatttggattaggccaccacgtttatgtatgtgtaaattatacggccactgattacttcaaaagtatgtacattgcagattcaggttcgcgctaactggatttatatgttacctcacgttttacatttgttattttgaaactggtggattccttgtggcctatattcattaatgcatgtttctttaccttcacttgcctaactgttcgttaggaaatatttatttaatttgatgcctaacagatggaacaacagttgattgacaagttgtattatttctttcttattaaggtaattgctataactgcaagcttcagaatgttaatttgaagcacccaaatgatactaaccaatatgctggtggacatgagtatctttgtggaatttatgacaccgaagagatgagcgagtctgaagatgtgtgataagcccatctttccacccctcttttttttttctgtctatagcatgtaggcatatgctatgcttcattgccagtggcatactgacatgcttctgatgctcctttcacaggaagaaaaagaggagcagaggataagaaaactttacgaggtatatttgtactatatgaaatgtttcatactgtatattgttacacatgtaatatggtgctagttactctcgtgatggtccattgatgtttgtttgctgttgccttttccttaggatcttgaggaaccaggtttgcatgaaaaactttttggtgatgtagaggaaacaggtttacaggaagaactttttggttgaggtggaatgggagcgggagtacgtactcctaatgagtatagaaccatttttatgctaccgtgtctgtgttgtagtagtgcgttttcatgttatttaggaatttgtggagttttggttattatgtagtacaacctgccattttactataatactatatggtacgtgacttctgtgtctc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0134400, RefSeq:Os06g0134400