Difference between revisions of "Os06g0136800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0136800| Description = Peptidase S14, ClpP family protein| Version = NM_001063264.1 GI:115466259 GeneID:4340044| Length = 3821 bp| Definit...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0136800|
 
GeneName = Os06g0136800|

Revision as of 20:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0136800

Description

Peptidase S14, ClpP family protein

Version

NM_001063264.1 GI:115466259 GeneID:4340044

Length

3821 bp

Definition

Oryza sativa Japonica Group Os06g0136800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1948465..1952285

Sequence Coding Region

1948506..1948588,1948711..1948757,1948866..1948938,1949408..1949528,1949639..1949776
,1951083..1951199,1951291..1951359,1951463..1951558,1951834..1951983

Expression

GEO Profiles:Os06g0136800

Genome Context

<gbrowseImage1> name=NC_008399:1948465..1952285 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:1948465..1952285 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcatctctcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatctctctgggattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgctctatatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacattaatggtccaggaggagatcttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaagggttcacgtacgggtatgcctctttgccggatttcacttcagtcacctgctggagcagctcgagggcaggctgatgatatagaaaatgaagcaaatgaacttattaggatcaagaactatctttacagcaagttgtcagagcacacaggtcatcctgttgataagattcatgaagatctatctagggtgaagcgcttcgatgctgaaggagctttggaatatgggattattgaccgtattattaggccttctcgcatcaagaaagagggatccactgctcaaaagaaggatctacgtaatctgggacttggctag</cdnaseq>

Protein Sequence

<aaseq>MALSAAAPANSSCFHPRAAAASAPSSLSVGTKVFVGLKAQTKLG SSESSCPNVTAGFYTAVNRRISLGLSNKRATRARISMMPVGTPRVPYRTPGEGTWQWL DIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMA LYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQAD DIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDRIIRP SRIKKEGSTAQKKDLRNLGLG</aaseq>

Gene Sequence

<dnaseqindica>42..124#247..293#402..474#944..1064#1175..1312#2619..2735#2827..2895#2999..3094#3370..3519#agtcactccccgcgagctaagctctcctccccatcactccgatggcgctgtccgcggcggcgccggcgaactcctcctgcttccacccgcgcgccgccgccgccagcgcgccctcatctctcaggtcagccgcctcccgctaactcctccccgtttctccgatccccaaacccccaaaaccctaaccctccctgcaacttctgctcttcgtttttttttatttttatatctctcccctttttgcagcgtgggcaccaaggtcttcgtcgggttgaaggcccagaccaagctaggtgagcgaggagctaaaaagattaattctcgaatttatgtcggattcgtcctcattgttgtcgattgtttgatttttggtgtttgtggggttggaaattgcggtgcaggctcgtcggagtcgtcgtgcccgaatgtcaccgccgggttctacaccgccgtcaaccggaggatctctctggggtacgtaacaagtgcgcagccatcgatatgctcaacttgatgttggggggcatcgtgtatgtgttataatgtgggaaggataaatgggattgtgctactgcacaatcttcagagttcagcaactcttcattctgggtgctgattatgcttgttgtgctagttcaatttttttgttatgcgtcgcacttttcatgcaagtgtctgtaggtttgttagtatgtgaaaggatactttttgtaaaatctaatagctctgggcatttgtctgtgttgatggataattttgcaattttcaaaagccaattttcaacacccatcaggtttataggcaatattttgttctaacaataatatgtatgtttgttagcgcttgaggtagccaaagaatatctgaataatgtcggtgtagtttgtctgaattgtttgttcacttattttatctcattgcacttcaaattaaaatttgctagattatcaaacaagagggctaccagggcgcgcatttcaatgatgcctgttggtacaccacgggtgccttacagaacacctggtgaaggaacttggcaatggcttgatatatggaatgctctagtaagactacacaatgcctaatggagtatgatgcttccttgaagtggtgcatctatttctatctgtgtgactgtattaatgtttatctaattcaaattgttcatgtgcagtatcgcgaacgaattatcttcattggggacagtatagatgaagagtttagtaaccaagtattggcgagcatgttgtatcttgacagcgttgataacactaaaaagattcttctatacattaatggtccaggaggagatgtaagaacttaacataccacaccttgtgttagcttcaattagccttttttttatgccacttatttttatgagtaaattgcgtctatagtacacaaacttggtaagtgggtgcgatctagtgcaagaatttgaaaaatgattatacaggtgtaacaacttggttagtgcgtgcattttggttaaaagatctctcttccaaaccatactttttcagctatgtaaagaaaaagcagccagttagatcatcttgagttctgaacaaggttttagatgtattgcatttgcttggttatcatactaaataatctactatttaaaattggaaaaaaataatgattatcaaaactaagtgcatgccaactaacaaaatttctgagcgatccaactaataaaaaaaatcggtgatgagcactgcaaaacattctcattgccaacaattaatctagcagttatatatgtttacaatacaaccaataaaatacgatgaatcattggtatgtaacagtgtttttatcaaaatgcacgtgattgttaagtttatgtaccggtttgctcattttacaagtttttacactaaatcgcacccacctgccaagtttttgtacaactggcgcaatttactctatttttatatatgtggatatgccaggccatgattttgtgattttcaagtagcattgtcactttaagaaattgaaccggggtgttatttcaaaagtttaataaaactgggatgaactaatcagttgctaacaccgcatgtatagctcattgaaggggcttcctgcgttccagtgctactttgtggtttgtaagttagaatgtttgggattgtccgaatatatgatcttatttttcagtgttgtacatgttgacaaaaccgatacaaaaacttatgtatctaactatttatattggatcaaaacacttatcctggaaagagggccactctagtcatgataatctaggacgggggaaagttatgacaacatgatccttcaattgtttggaaaattgttttactttagatgatatatatcagacctggtatggaaagaaagtttattggaattcaaaatcaactggaaatcaatgtgcgcaatgctcactgagcataacaagagtactttaaaacctatgttcctcaagtataccttatcaatatgtcaaatgtttgtttcaatgttccaactagttaaccgagatatctaaccaagtcaacttactgttagctaatctatgtcgcacactgcatttttttctgggggagtgactttctaaactgtattcatcaatgatgttgcagcttacaccatgcatggcattatatgatacaatgctaagcctaaaaagtcctattggtactcattgcctgggctttgcattcaacttggcaggatttattcttgcagctggtgaaaaggtatcactactctaatatcaacctcattttggaatttgtcttgagtatgctaagtcattatactcattttcttgcccttttttatgataagggttcacgtacgggtatgcctctttgccggatttcacttcagtcacctgctggagcagctcgagggcaggtcggggttcttcgtagatggtttgctaagtggttaaagttgggagtgtctggcaacacagctttgaattgaattggtttcttgcacactcttttccctgcaggctgatgatatagaaaatgaagcaaatgaacttattaggatcaagaactatctttacagcaagttgtcagagcacacaggtcatcctgttgataaggtaagaatttcgctgtgcatgctgctgttacattgtttggcactatctcctatgatttagaatgcctagttactccaaagaagagattttggttgtttattgcaccattccctattgatcaaaaggctcattcaagcttggtttattctgtttccttgtatctcatactgaggcaataatctgatccagattaccaagtttctattttccatgtacacgcaaaattgtcatgcaattgcaatccttcctttcatcttaagcatttcttgttgcagattcatgaagatctatctagggtgaagcgcttcgatgctgaaggagctttggaatatgggattattgaccgtattattaggccttctcgcatcaagaaagagggatccactgctcaaaagaaggatctacgtaatctgggacttggctagtagatgctattgtatcagttatacgtgttagattgtattgttctcccctcattactcctgctttgaaatcctactgctttatttcatcaacaggagttcatgtggagatatgagatttgttttgctgtctccattggtattggacttaaaagagagaataatgttgtagcagtcataagagaaatacggtactctagttgccattctggtgatctcattttgtcaaacatatcgagagacgcgtcatacattttgtgatatcaggcgagaatgttcttgttaaataatgtgttcgttgcctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0136800, RefSeq:Os06g0136800