Difference between revisions of "Os06g0145100"

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(Created page with "{{JaponicaGene| GeneName = Os06g0145100| Description = Similar to Pectate lyase homolog (EC 4.2.2.2)| Version = NM_001063321.1 GI:115466373 GeneID:4340105| Length = 1145 b...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0145100|
 
GeneName = Os06g0145100|

Revision as of 20:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0145100

Description

Similar to Pectate lyase homolog (EC 4.2.2.2)

Version

NM_001063321.1 GI:115466373 GeneID:4340105

Length

1145 bp

Definition

Oryza sativa Japonica Group Os06g0145100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2377130..2378274

Sequence Coding Region

2377130..2377821,2377920..2378274

Expression

GEO Profiles:Os06g0145100

Genome Context

<gbrowseImage1> name=NC_008399:2377130..2378274 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2377130..2378274 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgaccggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgctggcaagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaagggacgctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgacatgatcatccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgtggcgcgcaggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatcatccacaacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactccaagcgccactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggcaagggccttgtgccgcgctgcaggttcggattcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatcatcagccaggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaagagggagtacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtgatgatgaacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccagctcgacttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggcacgctcaactgccacgtcggcatgccatgctaa</cdnaseq>

Protein Sequence

<aaseq>MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYV VTDASDDEMVIPRKGTLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQV HITGAQITLQGVQHVIIHNVHIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSN IWIDHVSMSNCSDGLIDAVSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVA FNHFGKGLVPRCRFGFFHVVNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEV TKREYTPYDEYKEWVWKSQGDVMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLT KFAGTLNCHVGMPC</aaseq>

Gene Sequence

<dnaseqindica>1..692#791..1145#atggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgaccggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgctggcaagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaagggacgctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgacatgatcatccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgtggcgcgcaggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatcatccacaacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactccaagcgccactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggcaagggccttgtgccgcgctgcaggttcggattcttctttttattttaaagaattacacagtacaacgcacgcatactcactcctatgaatgcacgcacgtaaaccctacctctgtgaataggttcggattcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatcatcagccaggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaagagggagtacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtgatgatgaacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccagctcgacttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggcacgctcaactgccacgtcggcatgccatgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0145100, RefSeq:Os06g0145100