Difference between revisions of "Os06g0173100"
(Created page with "{{JaponicaGene|
GeneName = Os06g0173100|
Description = Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0173100| | GeneName = Os06g0173100| | ||
Revision as of 20:18, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0173100 |
|---|---|
| Description |
Similar to 26S protease regulatory subunit 6A homolog (TAT-binding protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) |
| Version |
NM_001063479.1 GI:115466689 GeneID:4340276 |
| Length |
4667 bp |
| Definition |
Oryza sativa Japonica Group Os06g0173100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:3688677..3693343 |
| Sequence Coding Region |
3688764..3688896,3689057..3689175,3689968..3690075,3690643..3690834,3691019..3691210 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:3688677..3693343 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:3688677..3693343 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacgtcatccggcgctcccccgccggcggcgatggccgtggacgacgcggaggacgaccagctcgcctccatgtccacggaggacatcgtccgtgcctcccgcctactcgacaacgagatccgcgtcctcaaggatgagctgcagcggaccaacttggagctggaatcgttcaaggagaagattaaggagaaccaggagaagattaagctcaacaagcagcttccctacctcgtcggcaacatcgttgagattctggaaatgaaccctgaggatgaagctgaggaggatggtgctaatattgatttagactcacaaaggaaaggaaaatgtgttgttctgaagacttccacaagacaaactatattccttcctgtggttgggctagttgaccctgataaactcaagcctggtgatttggttggagtaaacaaagacagctaccttatactggacacactgccatcagagtatgattcacgagtaaaggcaatggaggtggatgaaaaacccacagaggactacaatgatattggaggtcttgaaaagcagattcaagagcttgtggaggcaattgttttgccaatgacacacaaagatcggttccaaaagttgggcattcgcccccccaaaggagttcttttgtatggaccacctggaactgggaagacattgatggctcgtgcatgtgctgcacagacaaatgcgacgttcctgaaattagctggtccacaattagtccagatgtttatcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggagaaagctccctgcatcattttcattgatgagattgatgccattgggactaagaggtttgacagtgaggttagtggtgacagagaagttcagaggactatgttggaattgctgaaccaactcgatggatttagtagtgacgagcggataaaggtcatagcggcaacgaatcgtgctgacattcttgatcctgctttgatgcgatctggtcgtttggaccgaaagattgagtttcctcatccatctgaagaagcaagagctagaatcttgcaaattcactcaagaaaaatgaatgtaaacccagatgtgaattttgaagagctggctcgctcaacagatgacttcaatggagcgcaactgaaagctgtttgtgtcgaagctggtatgcttgcactgcggcgagatgctacagaggtgactcatgaggacttcaacgaaggcataatacaggtgcaggctaagaagaagtctagcctaaattattacgcttaa</cdnaseq> |
| Protein Sequence |
<aaseq>MTSSGAPPPAAMAVDDAEDDQLASMSTEDIVRASRLLDNEIRVL KDELQRTNLELESFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANID LDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDS RVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGP PGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFID EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMR SGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVE AGMLALRRDATEVTHEDFNEGIIQVQAKKKSSLNYYA</aaseq> |
| Gene Sequence |
<dnaseqindica>88..220#381..499#1292..1399#1967..2158#2343..2534#2817..2935#3073..3160#3488..3607#3711..3851#4398..4475#actagctcagtcgctcgcctccgctgctggtgtcgagccgcttccgatccccccccctcccgacgcgaggccgaaaccctaccgccgatgacgtcatccggcgctcccccgccggcggcgatggccgtggacgacgcggaggacgaccagctcgcctccatgtccacggaggacatcgtccgtgcctcccgcctactcgacaacgagatccgcgtcctcaaggcaagcccgcctccgctctctctctctctcccctaaccctagatccccctccctccgaggtttttgccagttgcctcctccggtgaatctttgcttggattagggtttccgggtcgtctgatcggtttggggttttttttggtgtgattttggtgcgcaggatgagctgcagcggaccaacttggagctggaatcgttcaaggagaagattaaggagaaccaggagaagattaagctcaacaagcagcttccctacctcgtcggcaacatcgttgaggtaaaaaataacaaaaatgccatcctagtttatcagattggatcttctattgtgttgagatacttcttagtttgatatgagatcgtggagtagtgcgtgagagaaaagccaaatgcgtgtgctttagtgtgggggcaattcggtataaattgcttttggtctgattcatcctgtttcttgtcaacattgttctgtaattcaataatctgtcttagctcgctgtgttcagaagatccacaattccttgtaagaaaatattgatactgtgatcatttgattttgcttctgctatttccattatttgtgcctacacattatctatctaagtgttagcatgtatttgcagcagtaataactctctaaagtctaaattatgtgactttgatccataggactgtaacaaccaacaacttgatctggcttggattactaacatcaaatagcatttcaacttgattactggtctatgtcagtactcttagtgttcaagatcttcaaggtctgaataagttcatcctgagtagattaacgcaaatttgcataagcataacatctgatggttctgtagatactatcacctatgatgcatttgagtatctgcactcctacatgacttgcaatatggtacgattcatcatagataaagtatttaaaactaaaccacttctattgattcggcatgataattaagtgctattaccagaaattgctgtttccctattaatgtgacctattgttttggaacaattgcgtattgtaaccatatggtttctgcttttctcaactgtttagattctggaaatgaaccctgaggatgaagctgaggaggatggtgctaatattgatttagactcacaaaggaaaggaaaatgtgttgttctgaagacttccacaagacaagtaagaacaaaaacctggtttccctattcctttagctcctagattttacatcatatgaatggacgacttcctttattcatgaaatggaaaaaattgattaaattacagcatgcctcacatatcagttatttctatattggcaattaaaataaggtttctgttgtaactgaatggtttggattagatatgatccataaaatgaatataactgcaaagaagaatatgttgaagcaagtgtagttggttggaaattttgtaaaagtaaacagttctacagaacaatttatgcctgtcgtccagcaagcaaagtgctctcagttaatgtctttgctttggtacaatagtgtcggactttgttatgtgggattgtgagtcttttattgaaacatatgtttacttccaaatgtccgctggaatgtgtattactgttttaggttcatatctaaaagcaatgaaatattctgtaacataatattttttaggcttaagcatgacttatagttcaaaaaaaaaagagaaatcaaactcatttttgtaaaatatcctttgttcctatttcgattgcagactatattccttcctgtggttgggctagttgaccctgataaactcaagcctggtgatttggttggagtaaacaaagacagctaccttatactggacacactgccatcagagtatgattcacgagtaaaggcaatggaggtggatgaaaaacccacagaggactacaatgatattggaggtcttgaaaagcaggtacattgcttaataaatgttgaaagttcagtgttcctttttggaactggaaatattgacaaccatctctttagggaataatagagcaatttgtatcgcttcatgcatcaagcatgttacatttccatccatcttttccttttcataatttatcattctttccatcctattttattgaatatagattcaagagcttgtggaggcaattgttttgccaatgacacacaaagatcggttccaaaagttgggcattcgcccccccaaaggagttcttttgtatggaccacctggaactgggaagacattgatggctcgtgcatgtgctgcacagacaaatgcgacgttcctgaaattagctggtccacaattagtccaggtaattatttatttcaattaaaaagctccattgattatcatcttttttttttcttgtgaccatgttgatatttatttggtgttcatggggaggcaatagttatgtggttgatcatcattgtttgttggtattacacagatgtcaatttgattgtatggttctatgaatatcattcaagaatcacatatgaacagccttgccttcagaagtctatttatttactatttacttgcatatggttttctagcgcaacaataatcatatttttttgggcttgcccagatgtttatcggtgatggagcaaagctggttcgggatgcttttcagcttgctaaggagaaagctccctgcatcattttcattgatgagattgatgccattgggactaagaggtttgacaggtatgtatgtctcacatgatttttatcccctggaatttttcctacattgtttcaaattctataatataatcaaaacattcttattgaaaaaaatatattcttattgttaacaagcattttgctttattctatgacagtgaggttagtggtgacagagaagttcagaggactatgttggaattgctgaaccaactcgatggatttagtagtgacgagcggataaaggttaggatatattaatatttgtttctttgttgcatgccgacatgcatgtactgattatccctgccctgatggtttagttgagcacttgatcttttttgatttcttgatctaatctgaaaatggatggtgttacatttcatgttgaaaagacaaatccatgtttatgtttggttcatgaaccatccttgcgctgctacgattttatctagcttctgaaatttcatttatcaatatcatcttgatatcattgcttcgaatctctatgttttgattagcaatgttttctttttagtcatttcatctgtttgatggtatattattggtcaggtcatagcggcaacgaatcgtgctgacattcttgatcctgctttgatgcgatctggtcgtttggaccgaaagattgagtttcctcatccatctgaagaagcaagagctagaatcttgcaagtaggtttccagaacctgtgatgtctaatcagctaatgtttattcatccatttgcttttgtaatccacaagtcatgctttaactaatatgtggttctctgtagattcactcaagaaaaatgaatgtaaacccagatgtgaattttgaagagctggctcgctcaacagatgacttcaatggagcgcaactgaaagctgtttgtgtcgaagctggtatgcttgcactgcggcgagatgctacagaggtgtgacttcctattttattcttataatcccataacgttcctttgttcttataatcccgtaatgtccctaaggttttggtttcagttctttattgagggggaaaagattctttccagattcatttgtttctagttgacagaacttagtaaagaattaatgtgactgtttttagatggatattatgtgaatatttgcaaaactcgataaaaatctcagggttcacaagttaaatgccatgcacacaaatagcactgtatgtttttcccatggacatgttctcttgtggtatcactcagcataggattctgctctgacatggtgccgctttgcctgccaatttgtggtttctgctcataggaaatagttttgcaaagctttatttttgggggttctaggcaatccctctacaccattaagtttctttggcatttcattactggagattgtgttaatctgcttggcattgttagataagctatttgttaccaactctaattatgttgataactacttgtggtttcttatcctgatcgtttcttgcgcaggtgactcatgaggacttcaacgaaggcataatacaggtgcaggctaagaagaagtctagcctaaattattacgcttaacaagctatgctagaatcatcagggctctggagttgtttgtaaccatactgtttggataatcgaaaatatggcttcacgtttcatttgaggtataacttttttacactataaagtcatcacttgcttcttatgtgatggaaagttggaaactggaaagcttcttatgtgatggaaactggaaagtttttgttt</dnaseqindica> |
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