Difference between revisions of "Os06g0185900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0185900| Description = Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx)| Version =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0185900|
 
GeneName = Os06g0185900|

Revision as of 20:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0185900

Description

Similar to Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.12) (PHGPx)

Version

NM_001063541.2 GI:297605323 GeneID:4340341

Length

3090 bp

Definition

Oryza sativa Japonica Group Os06g0185900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4320905..4323994

Sequence Coding Region

4322315..4322320,4322421..4322588,4323824..4323853

Expression

GEO Profiles:Os06g0185900

Genome Context

<gbrowseImage1> name=NC_008399:4320905..4323994 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4320905..4323994 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caaggtgttgatgtcaacgggcctaacacagcccctatttataagtttcttaagtcgagtgctggaggatttttgggtgatcttgtgaaatggaattttgagaagttcttggtggacaaaactggaaaagttgttgagagatacccacctacaacttcaccattccagattgagaaggacatccagaaactccttgcggcataa</cdnaseq>

Protein Sequence

<aaseq>QGVDVNGPNTAPIYKFLKSSAGGFLGDLVKWNFEKFLVDKTGKV VERYPPTTSPFQIEKDIQKLLAA</aaseq>

Gene Sequence

<dnaseqindica>1411..1416#1517..1684#2920..2949#ggggtcgcctacgccaccgccgccaccgggaagagcgtccacgacttcaccgtcaaggttgtggcatttcgagccctcgtgatttcgatcccttttgcccctcgtggtactggtactggtaccgcccccgcgctttagtttggattcgttgcgtgtgatgtgacgatgggatatgggtgagggcatgaggcgcgttaggttttgagaatttggatgttgcggtgtgtgtggttgatgtggctggtagtgttgttgaggtaggtacaccttggaagcacgtatatatcgatagattatcgtttaaattttgttctgttgttgaacgtgtttgcaattggctgggtcaggtgaatgctgttttgttttttagataatggaaacggattaaggtgaatgctgttgtatttacaaaatctcctgttttgacattatttttttagataatggaagctttgattgaactcaacaattacatcaaggcgatacaattatcctgagaacacttccaacctctcatgttatgacattataacattagcaaatcagctatcgcctatcaggggcgtcctgtatcagaattgttggtacttaggtagaaatgatgtgctgaatttcagtaactaggtatttttgaggtttgtctgagtcataggcttataagtgcacataactgtaaccatagattgatcaccgaaagatgtgtcgttgaacgtgattgaaatttagccaaatcagattaatgcagtcagaagctttgttggtttgtactgcaaattgacatgtcacagctccagctatcaagggcacattgtgccagaattataggttgagatgcatgcctgaacaaaattgctctgttttgtgcaggacattgatggaaaagatgttgcgcttagcaagttcaagggaagggcgctgctaattgttaatgttgcatctcagtggtattttttcttaatacattgctcctctgatatactgtatactaatatagtaagttatacagcattacctggcattaaacttcacgctgttctttaaattaaattccagtgggctgacaacagcaaattacacggaactatctcatctttatgagaagtacaagactcaaggtaatataatcactggtttaggttttggtgcattgaattgttcagctattgcataagaaactagacaacacttggctcttttattttcttttttcaaagcttctgtaggcatggaatgaacatggattcatatactgtatgcgatatcaccttagtccaatacttcatctgattttgcaggatttgagattcttgcatttccttgcaatcagtttggtgcacaagaacctgggtcaaacccgcagattaagcagtttgcttgtacaaggtttaaagctgaatttcctatttttgacaaggtatgttaactccattgtaagaagcgattggctcaatatttcctgccaattaatagtatatgaatgcatgatgcatttctgtgcttgtacgtgcaatggcaggttgatgtcaacgggcctaacacagcccctatttataagtttcttaagtcgagtgctggaggatttttgggtgatcttgtgaaatggaattttgagaagttcttggtggacaaaactggaaaagttgttgagagatacccacctacaacttcaccattccagattgaggtgaattttgtttctgcctttatcataacacccttgctttattgtattcgcttggtttgccagattgagttctcgaaatatatttttttctgtacaactttgaagatcaatgaaataattcatatctatcaatatgtattgtaaccttactaacttcagttatctgtctctactaagattcccaacatatgttacactgcatttgtaagaagattaatggactagcctttgtgagcctaccatgtatgcatacttttggaaagaagcaagcatgttttgcatatttttttgtgtacctaggtactgatggtgaggcagccctaatagtggttgcaagatattgtgcaaatctctttgaaccatgccattgtcgtaatatatatttctatgccaattttccccagctgtaaagattcaatctagaattttttttcctctttagtaagagttgacattactaaaaagtcattacctcattattatattaagaattaatggatacagtcccttggtgtgttgttggcgtccacctaattattgacctttccaggtctaacaaaaatgaacactagagcactgatctgacggtcttacaatagtgttggggagcccttagatatacctatttgcaccagagcccagatggcctgaggctgcctatggagtttgcatgggctctattggctatttgctttaatatagtcccagaactcagttgagagttgctcagttggaatgcaagctgcaaatagataatgtggttcagaacttcagatggtactaaccgttaaaggatatatccctaaactgtagccatttcatcaaatatggagctttagactcatggtgcttgctttggtataaaaatataccaatttgcagtactaggtgcattgtcacatgtaattgcgttgtgttatcatcacagagtggaaagccagagtccatcagtcacaagtcaatttttcttattattgaatcgattcactattttactttcggccaattttcatgctatattttagtgtcatgaagatagctttgctaaatgtactaattacctttgaattatttcaagtgctttccatataaaagtttatgcatttggttgagatgcacatccctgaaccctcttttggttataatattccaaatcacttgtgccgcattattctgtttaatgcattgtgccattccccgttgctcacagtcttctttatatacatctcttgcagaaggacatccagaaactccttgcggcataagtactagaggtcacacttcagctaagctcttctgtacatatgccttgcctcataattagagttttacttgattatatatcatttttttcttgtgtaaaattactcaccggttatatatatgtgcacgtatatagttgtaac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0185900, RefSeq:Os06g0185900