Difference between revisions of "Os06g0193000"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0193000| Description = Similar to Ubiquitin conjugating enzyme 2| Version = NM_001063575.1 GI:115466881 GeneID:4340379| Length = 4281 bp| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0193000|
 
GeneName = Os06g0193000|

Revision as of 20:19, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0193000

Description

Similar to Ubiquitin conjugating enzyme 2

Version

NM_001063575.1 GI:115466881 GeneID:4340379

Length

4281 bp

Definition

Oryza sativa Japonica Group Os06g0193000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4689952..4694232

Sequence Coding Region

4690123..4690408,4690697..4690788,4691206..4691233,4691624..4691663,4691795..4691856
,4692048..4692111,4692227..4692265,4693755..4693809,4693914..4693970

Expression

GEO Profiles:Os06g0193000

Genome Context

<gbrowseImage1> name=NC_008399:4689952..4694232 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4689952..4694232 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagaagggatgcctcaagcgcctccagaaggagtaccactcgctctgcaaggagccgccgccgcagatcgtggctcgcccgctgcccaacgacatattggagtggcattttgtacttgaaggtagtgctggcacaccatttgaaggtggatattattacgggaaactcaaatttccacctgattacccttttaagcctccaagcatcagcatgacaactcctagcggaaggtttgcccctcacaaaagaatatgcctatcaatgagtgactttcatccggaatcttggaatcctatgtggtctgtggcaagcattctcacgggcctcctttcattcatgatggatgatgctctgacaactggaagcatcaggagtacagagggggaaaagagacgtttagcaaaggcttcccttgcctacaactgtgagagcaaaaattgccctcacttcaggaaaatgtttccagagtacgtcgagaaatacaaccaacagaaacagatggagcaaaccgtagcggaaccagaaactcaagagaaccctgccccagctccatctcctgcggtccaacaacaggctgcagtagtagccaataaggcgaaacctgcggcggaggccgcaggcgagcagaagcagaagaagcgagtgcccttctggatgatgctggttatgttttctgtttttggtgcggtgatggccttgcccctgatgcaactctga</cdnaseq>

Protein Sequence

<aaseq>MAEKGCLKRLQKEYHSLCKEPPPQIVARPLPNDILEWHFVLEGS AGTPFEGGYYYGKLKFPPDYPFKPPSISMTTPSGRFAPHKRICLSMSDFHPESWNPMW SVASILTGLLSFMMDDALTTGSIRSTEGEKRRLAKASLAYNCESKNCPHFRKMFPEYV EKYNQQKQMEQTVAEPETQENPAPAPSPAVQQQAAVVANKAKPAAEAAGEQKQKKRVP FWMMLVMFSVFGAVMALPLMQL</aaseq>

Gene Sequence

<dnaseqindica>3825..4110#3445..3536#3000..3027#2570..2609#2377..2438#2122..2185#1968..2006#424..478#263..319#cccccctctcttctctctttttctcccctctccccggggaaacgcggcggccgccgatcccgatcccccccaccgccgccgccgcccgatccgaccaaatccccactacgcgtcccaattccgggccaattcgaccccccgagcgaccgccatctactcacctcccgatcgattcggatccccaatctagcgggcgcggggcggggcggggaggcgggattgggctagggttttgtgggggattggtgtattggattaggtgatggcggagaagggatgcctcaagcgcctccagaaggagtaccactcgctctgcaaggtgaggctctccgtgtggattggatttgattggattgtgttgatgcgattggtttcgatgcgattctgatggttttgtttcggttttgggtggtcggattgcaggagccgccgccgcagatcgtggctcgcccgctgcccaacgacatattggagtggcgtaagtatctttttctttttcgcttattacaacactagactagattgattcgtcgtctgttaacttgttaatgtgtggagtgaacggctaattgctcttgttattctaatcgatcgatacgcttacggtttatgtaccgtaaagagtgaattagatgtgttttttgtgttattgttatgtttccagactcatgttgctgcgtgcttttcgcaatttagctttcttgtataggttggcctagtgcagcaagactatatgaagttcagactcatgggacttaatctgtgttgtgttaattttgaatgtgaacatctgtttattttgttggagttatgactttgttcttttgacgagaacatcagtcacctagttcaaataggggattggattgctcgtattataggtcttggtgaaataatttcaggtgaattagtcgaatttggtttttggatgttaattccaccttttctcaactttcgggagacaaaacactgattggtctcccacatgttgctttacaaaaagaactaaactcttggagattattccacatgaattcctatcagttgttgtgaactagctccagattggtctcccactgcctatttttctatagtcaaatgctcttgtgattgggaggtcaataatcgctcatcagcacatattttgagggaacatgggagggaaagcaggctgtacctcagattttcaatagtggaaagtattcttattttgcataaatgatatagatttaggaggagagtgcacgcaggcaccaggggttctcaaacagaatgagaaaggattattaacacatagaaagttcagtttaaaatgctttcaaatagaggtcatacatggtcatgccagaacgtttgtatgattaagactagttgctagagcgttggtgtgattgactagttgtttttgtatttaagggcatgggcatggagatattggttttgttgattgactagctgctagagcgtttgtgtgattgactagtttttgtatttaagggcatgggcatgtggtccaagaaatatttgatgcatttgttggatttattcattcggcaatcatgcaataactcatacagttgtgccactgtctcacctcattatgtgaggcattgctctatggcccattctggttagtgggctccattacccccatctcctcccatatgttgttgacgtacatgctttggtcaccggctcaccgctaggttttgcactgactcaactataatgatgtgatacattgcactcgtggtaatacgatgttgtacttctatttactatcacaattaccatttgccacgacaaacatgataaatattatttacagttttgtataattatggccctctgctaatttatggtaagcctactaggctaatacatagcataccctcaggtcgcctatatttctatttcctatcaagcttgtattaggtattaattttgcatttttctttatattccagattttgtacttgaaggtagtgctggcacaccatttgaaggtaaagattacacaaactcaaaacaatcttctatacattctattacatttcagctagcacttcactaatcaatttatctgtaacaatattttcacatttgatttcttctccataggtggatattattacgggaaactcaaatttccacctgattacccttttaagcctccaagcatcaggtaatggaactttattttgtaatattgaattactgaaattgaaggaatgcttacaatgtgatagaagagttatacgtatttgggattagtgaacattttgaaactttggttttcatatctgacttgttttattgggattagtgaacactttgaactttggttttgcatatctgacttgttttattgttcagcatgacaactcctagcggaaggtttgcccctcacaaaagaatatgcctatcaatgagtgactgtaagttaatatgatcatattttttttactttattatatgcaaggtttatcccgtgatcagattatgattacttttatatttaatgatttgaaacaatttccatcacttttaatttattatgtttttgcagttcatccggaatcttggaatcctatgtggtctgtggcaaggtatgtacaaatctgtactaagcacaatatttgagcataacgtatttcccaccattatctggggagttgttgggctgagtcgtcattcaaacttaagagatatctagaccagtttacatctttccattcttgtaaagaacatgaagtcatgcttgtgtggttccttgggagtcgatgtaggtgaacaataatggcatattttctaagcatgaaacttattatgatagcatagatccaattaatccttctatttaatagtgagatgtgtggactctaaatcatcaaaatgtagttccactgctctagtgatatatgtagtctgtagttttactatataaatcttttctacctatctctcttcatagtctgacatatactttcgttctgcagcattctcacgggcctcctttcattcatggtaagctcttagttttgcatcagctcagaattagcaagaaagattctcatcctgttttaattgctaacccatgtacacaagatgttattcatgcctattaataatattggtaatcttgatcccccacccccaagcaacactgttgctttttcgcttgcgagaatgcagttctgtaaaccagcttaactcagaccgattccctattttagtgataatctcatctatttgtcatgtgagtaatataagtggtgcttaacagcaatgaaacaactgtccagctgtagttggaacaaaaccatttccattttgtcttcacaagtataaactgtgaaaaagaagtgcaaatttgttatttcttgttcctcatatggttgaagaggtcttgtttctcactgtgaattatacttgtgcttgcagatggatgatgctctgacaactggaagcatcaggagtacagagggggaaaagagacgtttagcaaaggcttcccttgcctacaactgtgagaggtaattgctcagtaagataatattaatttcatcatacatctatgtaggtttgtagaaaatgataaaagcagcaagcatatattgttagggagtaacatacttgccataaaagaaacagctcaatttagtgggaatgctcttcccaagcgaaatgaattatgttagataggtgacatttattacttgtgctgatgatacttatctaagtttttttattcacatgctgccatcaacccatccttgtttgaagccatgggacactaacaaactttgctcttgtttccacagcaaaaattgccctcacttcaggaaaatgtttccagagtacgtcgagaaatacaaccaacagaaacagatggagcaaaccgtagcggaaccagaaactcaagagaaccctgccccagctccatctcctgcggtccaacaacaggctgcagtagtagccaataaggcgaaacctgcggcggaggccgcaggcgagcagaagcagaagaagcgagtgcccttctggatgatgctggttatgttttctgtttttggtgcggtgatggccttgcccctgatgcaactctgacaaataaaataaaaagaggctataaaagtgtgataccggggggtaatttttgtatagttttcccaaggtttgcgtaactcgattcttctgtggactctcttcactttggtgatggtaaaatctgtagaaccatatcctctctttacagaatctacagaacagctttgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0193000, RefSeq:Os06g0193000