Difference between revisions of "Os06g0223300"

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(Created page with "{{JaponicaGene| GeneName = Os06g0223300| Description = Similar to TDR8 protein| Version = NM_001063718.1 GI:115467167 GeneID:4340529| Length = 4022 bp| Definition = Oryza...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0223300|
 
GeneName = Os06g0223300|

Revision as of 20:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0223300

Description

Similar to TDR8 protein

Version

NM_001063718.1 GI:115467167 GeneID:4340529

Length

4022 bp

Definition

Oryza sativa Japonica Group Os06g0223300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6371354..6375375

Sequence Coding Region

6371430..6371614,6371732..6371785,6371921..6371939,6372032..6372096,6372236..6372269
,6372373..6372434,6372539..6372638,6372866..6372928,6374041..6374195
,6374293..6374470,6374971..6375138

Expression

GEO Profiles:Os06g0223300

Genome Context

<gbrowseImage1> name=NC_008399:6371354..6375375 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6371354..6375375 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggacgggtgaagctgcagatcaagaggatcgagaacatcccgaacaggcaggtgacgttctccaagcggcgaaacgggctgatcaagaaggcctacgagctgtccgtcctctgcgacatcgacatcgccctcctcatgttctccccctccggccgcctcagccacttctccggccgccgcaggatcgaggacgtgctcacaaggtacatcaatctcccagaaagtgacagaggaggaactatccaaaacagagagtatttgatcaacatgctcacccagctcaaatgcgagagcgacgtcaccgaggatctcactaacacgagcagtaaggcgccggttaactccaacattgaggagcttcagcaagagatcaggagatgccagcaccagatgcagctcacagaggagcaattgaggatgtttgagccggacccggccaggtctgcatccatggaggacgtcgaggccagcgagaagttcatcgccggcatcctcagccgcgtcgaggagaggaagaggtatttgctgtgcagcatgggctcgttcgacgtgacggcgtcaacatctgccatgcagcatctgtatctaccgcagcagcatcagcacggggacatcactgataatgggtttggaagcgatgaggtggcctcgtgggtctctgaggggatgccgccgacaacctcgtcggtggcgtcgatattcgccggaacttcagattccatgatgtcttttagagatcaagcggtgtacgacacgatgagacaagatgcatgtgtggatcagacagtggtcccggagatggggatgtgccatgtggaccagcagaaccagagtgacgactggcaggcgtacacgtcggcggagttcctcaacgcgctaatcccgcccacgccgttccctctcgacgacgaggatacgatgggcccgatgttggcgtcatcaccgctattgatgcccggcatccatgaccagcagccgccggtggaggatatggcgacggcgggctgctcgcaagcgccggctaacgatggcaacgggttatacgcagctgaggacattgctccggttaacgttggttaa</cdnaseq>

Protein Sequence

<aaseq>MGRVKLQIKRIENIPNRQVTFSKRRNGLIKKAYELSVLCDIDIA LLMFSPSGRLSHFSGRRRIEDVLTRYINLPESDRGGTIQNREYLINMLTQLKCESDVT EDLTNTSSKAPVNSNIEELQQEIRRCQHQMQLTEEQLRMFEPDPARSASMEDVEASEK FIAGILSRVEERKRYLLCSMGSFDVTASTSAMQHLYLPQQHQHGDITDNGFGSDEVAS WVSEGMPPTTSSVASIFAGTSDSMMSFRDQAVYDTMRQDACVDQTVVPEMGMCHVDQQ NQSDDWQAYTSAEFLNALIPPTPFPLDDEDTMGPMLASSPLLMPGIHDQQPPVEDMAT AGCSQAPANDGNGLYAAEDIAPVNVG</aaseq>

Gene Sequence

<dnaseqindica>77..261#379..432#568..586#679..743#883..916#1020..1081#1186..1285#1513..1575#2688..2842#2940..3117#3618..3785#gcctcgcctcgccgatcgatcgacggacgacggccggaacatagctgtagatcgagctgaatcgccggcggcggccatgggacgggtgaagctgcagatcaagaggatcgagaacatcccgaacaggcaggtgacgttctccaagcggcgaaacgggctgatcaagaaggcctacgagctgtccgtcctctgcgacatcgacatcgccctcctcatgttctccccctccggccgcctcagccacttctccggccgccgcaggtaaattaattaagtttaaatcaaatcaaatcaaattaattaaccacatgcatgcattcgacttcgagcatgcaaatttgatcatatatagtcatgtaattttttgcgactttgtaggatcgaggacgtgctcacaaggtacatcaatctcccagaaagtgacagaggagggtacgtaaacttcttcgacggaaaaggttcttctttttattttttttcatttgatgcattattaccgttttactcgtgaggaagttgttaatattgatcaagaaaccgtttgccaattattcctatcgcatgcagaactatccaaaacagagaggtgagggttctcttgccttaacttttcttttttttttctacatcgtttttgctatataatttctctcatcatcaacgtgttcatcgatgcagtatttgatcaacatgctcacccagctcaaatgcgagagcgacgtcaccgaggatctcactaacacgtacgtagagctagctcgatcgcgattcattcttaatcaaacgatctgcattatgcttcagtttcacaacgagattttaacctgaacctagcactcttcctcgtgtttgttcttaatctcggtgctcttgctgatccaggagcagtaaggcgccggttaactccaacattgaggtaattaacatttctcgcacatgaacaccactgtcaattgagctctgaaaaaatctctgaacccaacgctctgaaactgaaccgatcactgactctcactcaggagcttcagcaagagatcaggagatgccagcaccagatgcagctcacagaggagcaattgaggtgcagtaatatcaatacaatatatgaatatcgtctcattctctcgattaattaacttgcgatccatgctagttgcaatggttttttctggcgttgggtttcaggatgtttgagccggacccggccaggtctgcatccatggaggacgtcgaggccagcgagaagttcatcgccggcatcctcagccgcgtcgaggagaggaaggtgagcacaagtgttaatttgatcactcgattaatggcgctgtaattagtggccgagagtgatatccgaggaatgatcacatcagataataggattaatgacatgatcttcaaataatgacgatttttacagtgatcgtctagcttaattttcaggtaatagaaatgatccagattttttttcgtctgctaactaactgcgtttctgttgtcacacatgttttgcagaggtatttgctgtgcagcatgggctcgttcgacgtgacggcgtcaacatctgccatgcagcatgtacgcaaatctatctttctatagttggctcgtgtaagctatcttattggccacgtggcgatgttaaatttcaagataaatctaaaaaaatatgcataagaaaaaatagccaaaaagaaagaaaaagacacaaatctaatttctggagacttcccaattatctatcctctttgagataaatgtagagaatatatatccataacaaaaataaattaccaaggagcaaccaaaaacacatcatccagattccagaggtttcccaaaatgtttttcccattgcaatatatctatgtatctcatgctggttggtttcatgctagctaattcgttgccctcataatcctttagttaagcaacacgtggcgagatacaagcggtagaaagagcgcgggtaagaaacccctcataatcctttagttgagcaacacgtggcgagatacaagcggtagaaagagcgcgggtaagaaaccctctctataaaactagcaaagcacgttacgacggtgaattaaaaaaaagagagaagaagttccactgcatgtgcgtagctacgccatgctgcaccataatccaaccgtgcatgatcaaactagtgcaaacacataaaagaggggaaaaggaaaaaaaataaaaagacgaaaaaatattttttttgtaaaattctttgcaaattattcgggacaagtatcgtgaccacttgtattacgagaaactaaaaaggataaatagaaaaaaataaatgacagaaacaattttgctctttttaagattgagtcgaagactataaccctgataatcattttctaaatatatatattttctgcttatactataaaataaataatatgtatatcttttaacttttagaaaacgttacaattatgataaaaaaaataccggtcttggatccatatctagattcttaaaggccatacacataggctaatagaggaaacgccaatcgacaagttgattttttaatatattaacctaactagctccatcactatctctcgttttgtattacgtcataaacaatgtgtaaaatattcatagacaaattaattatgctgatcacaccttattataaattatcacatgtgcgtgtgcagctgtatctaccgcagcagcatcagcacggggacatcactgataatgggtttggaagcgatgaggtggcctcgtgggtctctgaggggatgccgccgacaacctcgtcggtggcgtcgatattcgccggaacttcagattccatgatgtcttttaggtaagaaagatagtagataacaagcttttaaaaactagaatagaatgtacctgtactctatttatgtgagcttaaatttttttttcttcatggtcagagatcaagcggtgtacgacacgatgagacaagatgcatgtgtggatcagacagtggtcccggagatggggatgtgccatgtggaccagcagaaccagagtgacgactggcaggcgtacacgtcggcggagttcctcaacgcgctaatcccgcccacgccgttccctctcgacgacgaggtgatgtcataaatagaatagctgacgtcagcatgataacgtagatattggatctggtacctccggtaacatacatgataccatgtagttaacagatttgataactatatatcatgttgatgtcagtatagtaccgtagatattatctagtactttcgggtaccaggcatgatatctcgtaggtaccaaatatgatagttatgtatcttgctgacgtcaatacgatatacatcgaacctagtacatatcgtattaaacattatattcagtaggttccagatctggtatttaggtattatgttgacatcatctatttcattggaacggtataccattctacattctatattgtttctgttaatatgcaccaataatccactccaacatatttttgatgcgatgactgacgacgctgaacttttttttaatgaattatcatgagattgtttcttttctttattttacacacacaactctaaactgttgtgtgtggagtgcaggatacgatgggcccgatgttggcgtcatcaccgctattgatgcccggcatccatgaccagcagccgccggtggaggatatggcgacggcgggctgctcgcaagcgccggctaacgatggcaacgggttatacgcagctgaggacattgctccggttaacgttggttaattagatgcttttgtactagaaatttatggaatatatagtgttgtcatgttactagtgtgccaggaattgaagctaaggatttttagtttggaattttttttctttgatcatgatgggctgggtgtgccacaattaatgttatatgatccatataatacaccatgcacaatgtaagataatgttacgtactagcatgtaataagatattatccagtaagatcgagttatttatcatct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0223300, RefSeq:Os06g0223300