Difference between revisions of "Os06g0246700"

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(Created page with "{{JaponicaGene| GeneName = Os06g0246700| Description = FAR1 domain containing protein| Version = NM_001187763.1 GI:297724656 GeneID:9271532| Length = 4050 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0246700|
 
GeneName = Os06g0246700|

Revision as of 20:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0246700

Description

FAR1 domain containing protein

Version

NM_001187763.1 GI:297724656 GeneID:9271532

Length

4050 bp

Definition

Oryza sativa Japonica Group Os06g0246700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7614604..7618653

Sequence Coding Region

7614604..7614608,7615624..7616325,7616410..7616827,7617162..7618007,7618159..7618653

Expression

GEO Profiles:Os06g0246700

Genome Context

<gbrowseImage1> name=NC_008399:7614604..7618653 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7614604..7618653 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatatcccagaattagtttctggtgaaaatgaacctccagtacaccatttactagttgatgataaagacaaaagtgaaacatacttccctataaatccgactgacactagcatggagattcctgctataaatttggacgacacttttgactttgaaactatgtatactgctggtgatgctggaagtttacaagcacacaatgtagccaatgatgagatgcaagtatttgaagccaatgatgagatgcaaatatttgaaggcgattatgagatgcaagtatttgaagaaatgtcagatcgtggagacacaatgcatactagtgttgcaactggcgcaacaactgctactgccaacacaatttcaagtgaagactctagaacagatgattcagaagcacagtcagcgccatcacaggatattccgtgcagcacacaagtgccgtacctcaccttgactttcaactcagaggaggaagcaagggctcactacaacaggtacgcaaagcgcgttggattttcaatcaaaatcaacacttcaaggaagtcagccaaagatggagaacgtgacaaagtaatgtttgtttgcaacaaatgtggtccagaagaaaaaacgggtgaagtgtgccccccaaagaaaaggaaaagaagtagaacaagacaggctgcctggaaagcaaggatgacagtgaagaggaaaggagctagagcaataccgaaagaggaaaaagatttcatcacaatgctgcacggagttaatctctcagctggtagaattatgcaattgatgtctgaattgtatggaggggctaggaatgtaccctacactagaaaagacataagcaatttcaagtcaaagttggggagcgagtataggtgtagagatattcctgaaacaattgctcacttcgaggaaataaaaaaggatgacccaaatttcttctacaagattcaacttgataaagaagacagggtgcagaacatattttgggttgatggagcagcaagaaatgcctacaaagacttcaaagattgcatctcgtttgactgcacatacatgacaaacatgtataacatgccttgtgcaccattcattgggttaaacaaacatgggcaatcaatacagctgggttgtggatttctaaggaatgaaaagacagaaacctttgtatggttgtttcaagcatttctagaggctatggaaggtgtagagcccacaaacataataactgatcaagacctagctatgaaggcagctatagcgctagttttcccacatgctaagcatcgcaactgccactggcatataatgcagaatgctcagaagaagattggccatatattagatcatgacaaagcattgtgtgatgcattcaatgactgccttgacaatagctggacagagcaagagtttgatgctaaatgggatgcaatgttgacaacatatcatttacaagataatgagcacttccgacacctttgggaaatgagacagtgttgggtcccagtatactttatgcactgtttcttccctttcctccagactacagcacggagtgagggatttaacgcagtgctgaagcgctatgtaaatccccaaaatagcatatacaacttctttttgcagtacaagaagattcaagaaaaaatcactgttgcaacagatcagaatgagtttgaagcagaagaaacaatcccttctatgtggggtaactatcccatggaaacaaaagcattggaggtctacacaaggcctatattcaacagatttcaaaaagagctgattgcttcaacatcatataaattgacccgaacttctgaaaacatgtatctagtagaaccgaatggaggtcctgttaggaattatggatcaagggcattcattgtagctgcaaatgtgttggataggacatacaactgtgaatgctgtaagtttgaaagggatggcattctttgctgtcatgttctgaaggtgatgacatctgattttgtgggccaagtgagtgacattccagaacattacatattgcctagatggacgatggttaaagagcctgaattgcctccagttacaagcattggtgaacaaatgcaattgccccctgaatctctaaagctaatcaggtataccaatctgtgcacaaaatttacacagattgcaaaagatgcatcaagcaacgagaaagcctaccgtatggctctacagcgtatgagctcaatgactgatgacttagcagctatgaagcagagtagaaagaaacagaaaaaagcacagccagccccagctgatcctgcaagaggaatttcagatatcccctcggcatcaactaacccaacgctacagataaatgacccccccatcatacaaaagcaagggagaccagtttcaacaagacgcaagcctggggtccatgcaaaggcgtcaaagacatcagttaggaaaggcctagctagtactgagaagtga</cdnaseq>

Protein Sequence

<aaseq>MNIPELVSGENEPPVHHLLVDDKDKSETYFPINPTDTSMEIPAI NLDDTFDFETMYTAGDAGSLQAHNVANDEMQVFEANDEMQIFEGDYEMQVFEEMSDRG DTMHTSVATGATTATANTISSEDSRTDDSEAQSAPSQDIPCSTQVPYLTLTFNSEEEA RAHYNRYAKRVGFSIKINTSRKSAKDGERDKVMFVCNKCGPEEKTGEVCPPKKRKRSR TRQAAWKARMTVKRKGARAIPKEEKDFITMLHGVNLSAGRIMQLMSELYGGARNVPYT RKDISNFKSKLGSEYRCRDIPETIAHFEEIKKDDPNFFYKIQLDKEDRVQNIFWVDGA ARNAYKDFKDCISFDCTYMTNMYNMPCAPFIGLNKHGQSIQLGCGFLRNEKTETFVWL FQAFLEAMEGVEPTNIITDQDLAMKAAIALVFPHAKHRNCHWHIMQNAQKKIGHILDH DKALCDAFNDCLDNSWTEQEFDAKWDAMLTTYHLQDNEHFRHLWEMRQCWVPVYFMHC FFPFLQTTARSEGFNAVLKRYVNPQNSIYNFFLQYKKIQEKITVATDQNEFEAEETIP SMWGNYPMETKALEVYTRPIFNRFQKELIASTSYKLTRTSENMYLVEPNGGPVRNYGS RAFIVAANVLDRTYNCECCKFERDGILCCHVLKVMTSDFVGQVSDIPEHYILPRWTMV KEPELPPVTSIGEQMQLPPESLKLIRYTNLCTKFTQIAKDASSNEKAYRMALQRMSSM TDDLAAMKQSRKKQKKAQPAPADPARGISDIPSASTNPTLQINDPPIIQKQGRPVSTR RKPGVHAKASKTSVRKGLASTEK</aaseq>

Gene Sequence

<dnaseqindica>1..5#1021..1722#1807..2224#2559..3404#3556..4050#atgaagttcaaattccgtcttctttgagatccatccacaaaaaaaaaagaactaacctagaaacttttagatcttctctgtattcttcgagaaacaaattgatatgaatctgtgctgtaattttgtgagtaatgagctgtactcttgttttctgtcttccttcttgatttctgtcttcctttataccccaaattcactttctagtgctactgagaaaaaaaagttatagagaaggcatgagtcctggtgtttcaaaaaactcagagcaatttctagtaacatgcaacttacttccatataaacttgaattcacaaaccctagtttacagtttacacagcatgaaaacatcccatctagttacctctcagtgcaatatgaacagaaaagttactttacttcccaaaataaatttgaatttgtattccctaattacataggcatgagtgctggtgttggaaatctcatagcaattttaacagaagtctcagtgcatttttaacagaaaagttacttctaacacttcaatgagttacttccaagaaacattaagttacttctcactgcgcattaagttacttctcactgtgcattaggttctcatagcaattttaacagtctcagtgcagttttaacagaaagttacttgtaacaattcaattagttacttcctagaaacatggaagttacttccctataaacttgaatctacatttcctagttacaaattttgtaccttgtttctatatacagcatgatgcatcacctagttgcgtctcaatttcatcttgtactgcatcaaaacaaattgtgaaaaaaaaaatcattagtatagccactggtcttaatttgagaaaattgcttcctataaaacatctaaaaaagacatgctgcaaaaactaaaagttacttcttccccccccccaaattactgaattacctcaatgaatgctctgtataaactaactttgttactaatagcctgaaacacatgcagcaaaaatggactttgacctcaacagtatcccagaattagtttctggtgaaaatgaacctccagtacaccatttactagttgatgataaagacaaaagtgaaacatacttccctataaatccgactgacactagcatggagattcctgctataaatttggacgacacttttgactttgaaactatgtatactgctggtgatgctggaagtttacaagcacacaatgtagccaatgatgagatgcaagtatttgaagccaatgatgagatgcaaatatttgaaggcgattatgagatgcaagtatttgaagaaatgtcagatcgtggagacacaatgcatactagtgttgcaactggcgcaacaactgctactgccaacacaatttcaagtgaagactctagaacagatgattcagaagcacagtcagcgccatcacaggatattccgtgcagcacacaagtgccgtacctcaccttgactttcaactcagaggaggaagcaagggctcactacaacaggtacgcaaagcgcgttggattttcaatcaaaatcaacacttcaaggaagtcagccaaagatggagaacgtgacaaagtaatgtttgtttgcaacaaatgtggtccagaagaaaaaacgggtgaagtgtgccccccaaagaaaaggaaaagaagtagaacaagacaggctgcctggaaagcaaggatgacagtgaagaggaaaggagctaggtgagaagtaattcagtttgttgaagaacacacacatcctctagttagaaagttttcactcaagaaattcctaaggtcacatagagcaataccgaaagaggaaaaagatttcatcacaatgctgcacggagttaatctctcagctggtagaattatgcaattgatgtctgaattgtatggaggggctaggaatgtaccctacactagaaaagacataagcaatttcaagtcaaagttggggagcgagtataggtgtagagatattcctgaaacaattgctcacttcgaggaaataaaaaaggatgacccaaatttcttctacaagattcaacttgataaagaagacagggtgcagaacatattttgggttgatggagcagcaagaaatgcctacaaagacttcaaagattgcatctcgtttgactgcacatacatgacaaacatgtataacatgccttgtgcaccattcattgggttaaacaaacatgggcaatcaatacaggtactccttttttttgcaaaaaagtaattctaaaaaatctgtaataactttgtacattatagtacatcataagttacttgttgcattcattgagttacatcaaatcctgataaaagttacttctagtagaatgtgaagttacatttgtttttttaaaaaaaggtgaaaaagtaactaagtttacaagttacatttttagtgtttgttctatagttcaaaattgtattgatttacttctagcaaacacaaactgtagagactacgcaaaattgtagtaacttacttgcttcaaaactgtactgacttccttatgtgtattatttttgatattcagctgggttgtggatttctaaggaatgaaaagacagaaacctttgtatggttgtttcaagcatttctagaggctatggaaggtgtagagcccacaaacataataactgatcaagacctagctatgaaggcagctatagcgctagttttcccacatgctaagcatcgcaactgccactggcatataatgcagaatgctcagaagaagattggccatatattagatcatgacaaagcattgtgtgatgcattcaatgactgccttgacaatagctggacagagcaagagtttgatgctaaatgggatgcaatgttgacaacatatcatttacaagataatgagcacttccgacacctttgggaaatgagacagtgttgggtcccagtatactttatgcactgtttcttccctttcctccagactacagcacggagtgagggatttaacgcagtgctgaagcgctatgtaaatccccaaaatagcatatacaacttctttttgcagtacaagaagattcaagaaaaaatcactgttgcaacagatcagaatgagtttgaagcagaagaaacaatcccttctatgtggggtaactatcccatggaaacaaaagcattggaggtctacacaaggcctatattcaacagatttcaaaaagagctgattgcttcaacatcatataaattgacccgaacttctgaaaacatgtatctagtagaaccgaatggaggtcctgttaggaattatggatcaagggcattcattgtagctgcaaatgtgttggataggacatacaactgtgaatgctgtaagtttgaaagggatggcattctttgctgtcatgttctgaaggtaacagtctgttattgtagtaagctacttctcactgtgcattaagctacttctcactgcacattaagttacttcttaatgtgcattaaattacttcttatgcattaagcacttttggcaggtaataaaacatatgtttttttccatgcaggtgatgacatctgattttgtgggccaagtgagtgacattccagaacattacatattgcctagatggacgatggttaaagagcctgaattgcctccagttacaagcattggtgaacaaatgcaattgccccctgaatctctaaagctaatcaggtataccaatctgtgcacaaaatttacacagattgcaaaagatgcatcaagcaacgagaaagcctaccgtatggctctacagcgtatgagctcaatgactgatgacttagcagctatgaagcagagtagaaagaaacagaaaaaagcacagccagccccagctgatcctgcaagaggaatttcagatatcccctcggcatcaactaacccaacgctacagataaatgacccccccatcatacaaaagcaagggagaccagtttcaacaagacgcaagcctggggtccatgcaaaggcgtcaaagacatcagttaggaaaggcctagctagtactgagaagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0246700, RefSeq:Os06g0246700