Difference between revisions of "Os06g0247500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0247500| Description = Similar to Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (EC 2.7.1.90) (Fragment)| Version = NM_001063819.1...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0247500|
 
GeneName = Os06g0247500|

Revision as of 20:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0247500

Description

Similar to Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (EC 2.7.1.90) (Fragment)

Version

NM_001063819.1 GI:115467369 GeneID:4340643

Length

5221 bp

Definition

Oryza sativa Japonica Group Os06g0247500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7648088..7653308

Sequence Coding Region

7648276..7648352,7648444..7648512,7648602..7648646,7648867..7648951,7649114..7649225
,7649297..7649412,7649509..7649679,7649756..7649887,7650462..7650550
,7650945..7651008,7651227..7651332,7651691..7651797,7651928..7651981
,7652289..7652410,7652777..7652932,7653045..7653243

Expression

GEO Profiles:Os06g0247500

Genome Context

<gbrowseImage1> name=NC_008399:7648088..7653308 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7648088..7653308 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggtggcggcgaacggcggcggcgacggcgcgcaggcgtccaacgcgcccgcccccaccaggctcgcgtcggtctacagcgaggtgcagaccagccgcctcaagcacgcgctccccctcccctccgtcctccgctcccccttcgccctcgccgacggccccgccagctccgccgccggcaaccccggtgagatcgcgaagctgttccccaacctgttcggccagccgtccgtgtcgctggtgccgtcgccggagccggcgtccaccaggccgctcaaggtcggcgtcgtgctctccggcggtcaggcgcccggcggccacaatgtcatctgcggcatcttcgattacctgcaggaatatgcaaaaggatccgtcatgtatggattcaagggaggtccagctggagtcatgaagtgcaagtacgttgagctcactgcggattatgtgtacccctacagaaaccagggtggatttgatatgatctgcagtggtagggacaagattgaaacaccagagcagttcaagcaagctgaagacactgtaaacaaacttgatttggatgggcttgttgtcattggtggtgatgattcaaacacaaacgcatgccttcttgctgagtacttcagggggaagaacatgaaaactcgtgtcattggttgcccaaagactattgatggagatctgaaatgcaaggaggttccaacaagctttgggtttgacactgcttgcaagatatactctgaaatgattggtaatgttatgactgatgcacgctcaaccgggaagtactaccactttgtgaggcttatgggacgtgctgcttctcacattacattggagtgtgctctgcaaacacatcctaatgttgcactcattggagaagaggttgctgcaaagaaggaaactcttaaaagtgtcaccgactacattaccgacattgtctgcaagcgtgcagaacttggttacaactatggtgtgatccttatcccagagggtctgattgatttcatcccagaggttcaaaaactcattgcagaattgaatgaaattttggcgcatgatgttgttgatgaggcaggggcttggaaaagcaagcttcaaccagaatccaggcaactgtttgacttcctgcccaaaaccatccaggagcaacttttgcttgaaagagatcctcatggaaatgttcaggttgcaaaaattgaaacagagaaaatgcttattgccatggttgagactgaattggagaagagaaaagctgaggggaagtaccccgcacatttcagaggccaatctcacttctttggatatgaaggaagatgtggccttcctactatttttgattctaactattgctatgcgttaggctacggttctggggcacttctccaatgtgggaagacaggactgattacgtcggttggcaacctcgctgctcctgtggaagaatggaccgttggtggaactgcattgacatcgttgatggatgttgagaggaggcacggaaagtacaagccagtgatcaagaaggctatggtggaacttgacggggcaccgtttaagaagtttgcttcattgcgagatgagtggtccctcaagaaccattacatcagccctggtcccatccagttcagtggccctggaagcaacgatgcgaaccacaccttgatgttggaactcggcgccgaggcatag</cdnaseq>

Protein Sequence

<aaseq>MAAAAVAANGGGDGAQASNAPAPTRLASVYSEVQTSRLKHALPL PSVLRSPFALADGPASSAAGNPGEIAKLFPNLFGQPSVSLVPSPEPASTRPLKVGVVL SGGQAPGGHNVICGIFDYLQEYAKGSVMYGFKGGPAGVMKCKYVELTADYVYPYRNQG GFDMICSGRDKIETPEQFKQAEDTVNKLDLDGLVVIGGDDSNTNACLLAEYFRGKNMK TRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMTDARSTGKYYHFVRLMGR AASHITLECALQTHPNVALIGEEVAAKKETLKSVTDYITDIVCKRAELGYNYGVILIP EGLIDFIPEVQKLIAELNEILAHDVVDEAGAWKSKLQPESRQLFDFLPKTIQEQLLLE RDPHGNVQVAKIETEKMLIAMVETELEKRKAEGKYPAHFRGQSHFFGYEGRCGLPTIF DSNYCYALGYGSGALLQCGKTGLITSVGNLAAPVEEWTVGGTALTSLMDVERRHGKYK PVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLELGAE A</aaseq>

Gene Sequence

<dnaseqindica>4957..5033#4797..4865#4663..4707#4358..4442#4084..4195#3897..4012#3630..3800#3422..3553#2759..2847#2301..2364#1977..2082#1512..1618#1328..1381#899..1020#377..532#66..264#gctctctcggcatattctcttccacccccgaaaccactccaaaaccaaaccaaatctcgcggcgcatggcggcggcggcggtggcggcgaacggcggcggcgacggcgcgcaggcgtccaacgcgcccgcccccaccaggctcgcgtcggtctacagcgaggtgcagaccagccgcctcaagcacgcgctccccctcccctccgtcctccgctcccccttcgccctcgccgacggccccgccagctccgccgccggcaaccccggtcagtcccgagcccgactcttctgtggatctcgccctcctcctgcttggttggtgttcgttactggtgtgagctttagatttgatctggttgtggtggtggtggtgtgcaggtgagatcgcgaagctgttccccaacctgttcggccagccgtccgtgtcgctggtgccgtcgccggagccggcgtccaccaggccgctcaaggtcggcgtcgtgctctccggcggtcaggcgcccggcggccacaatgtcatctgcggcatcttcggtgagtgcgctagtgttctcgagctgtttgttaaccctgtttacccaaggctatggaggatcagttctctgtacaagcgaatttgaagctcgtggtttcgagatgggggtgttcgcgatctggataggatcgtggttttagctagttagagttggtgttctccaaacaagctttggcatcgaacgcgcacagttcttagatcttgatcgattttggttgtttagcgagggccagaattaagagatctgcttattttttgattgtgagttgtgtcccggttgcactgaaaaatcgaataggcactaatgatatattgtggttccaaatatatttcttgatgaatttgcttgccttgtgtcggaccagattacctgcaggaatatgcaaaaggatccgtcatgtatggattcaagggaggtccagctggagtcatgaagtgcaagtacgttgagctcactgcggattatgtgtacccctacagaaaccaggtatagcaacttagattcactaagcatgctattgggtcgaaaattcgacaggtgcctattctctgattttctgtaaatcatgttagtttagtaggtggtgttaggtaaggttctggtgtagaaaatatgataagaccctttttttggtgcaaataattacattctcattttcttttttggagtatgatcatgctaggtgtcaagtactgctgatggttaggtcgctgcatgaaatatacacacttttcctttttaaggggctctcttatttcaggtacgattttaattttgtttctctttttgatagggtggatttgatatgatctgcagtggtagggacaagattgaaacaccagagcaggtatatctttgcgcttttatgtgcaaatgcttatttaatccctttatctgcctttcagggtatttggctattttgttgcctagtttcactagcattttcttattttaaattctgtcatgtatttgagcagttcaagcaagctgaagacactgtaaacaaacttgatttggatgggcttgttgtcattggtggtgatgattcaaacacaaacgcatgccttcttgctgagtacttcaggttggcccctaatatgtgtaaccctgttcttttgcttcttaggcaattttctttagttgctgttgacaaagacctttgtgtactgttgatgctctgtcaactgtaaacaggtcaattccgaaaggaaatacagaaaaaagttttccaaacagtaacaaaaagctcttatttttgttgtatgttgctgaagcatattttctgcatgatgttttctgttaaacaagcattaagtctgcaatagcattgagccattaactgaattctgcaacatagagaatctagatattattctcgatagttttattggcaatattaactatatgcttgttgacaagtgagtgattgtttaactttgtagggggaagaacatgaaaactcgtgtcattggttgcccaaagactattgatggagatctgaaatgcaaggaggttccaacaagctttgggtttgacactgcttgcaaggtatcaggttcttgatccttgtgcatcagttttcaaaatttcagctaattctactgtagattgtgaagttttcacccttatgaccttgatgcacttgctcaactgcacatggtgaaattaggacattttgcacataatatgaaaatcatcacggcaataataacaagttgacgatttttcctcaaaaaagttaacgattgatccatcttctttttcagatatactctgaaatgattggtaatgttatgactgatgcacgctcaaccgggaagtactaccactgtaagtttctgttttggttgtcagacatatgccaaactatgatttttgttttcctaaacatggaaagagagttgataggagcaaactatgtttagtttgaagagatcatggataataattgccaacagtagctgtacatggctattaaagtatactgtcatttagtttatccataactaaattgaagaaggtcattacatgctcagcaacctagtaaagtagtatttattttttcgtacattatacaacaaggcctcaaacatcctcataatgctgtaacaacatgctgctaacatataaaatccttgagtgtcaacttctgcagatggttaatttaacattattttgtctatttctgacacaatactaataagtatttgttatgttcatgtagttgtgaggcttatgggacgtgctgcttctcacattacattggagtgtgctctgcaaacacatcctaatgttgcactcattggagaagaggtttgtaattcttatatatgatcttctacattgacctgacactccaaccttttcctagcttgaatactgttccataatggtggaatcatctattcatttcgattcatgtttatttcatgctgatttcatttacactttttcctaccaaatgtgatgggcatgattggggctagtccactaggccttattgaggttcgttgtccctggacccagttggtgttgcatttccatggaagtcagcatcacaatcacaagggcaagcggtagatagacaatggacacttgtttttctgtcaatgctaacaactacaataggtctcctttaaagcggattattgtaacaattgtatatacgttaatactactgcagtatgttgctgtacagtaacattgcaggtcccaattcggtgttggcacatagcacaaacctcgtactttatatcacagtttggtactaaaaattgactcgagtaaaatgttgctggagatgatctgcagtttttctaaagtgcacatggcatattgtttgcttattatcattaccatttcagaacacttcttttttgtactgtaggttgctgcaaagaaggaaactcttaaaagtgtcaccgactacattaccgacattgtctgcaagcgtgcagaacttggttacaactatggtgtgatccttatcccagagggtctgattgatttcatcccagaggtttgacaatcttcattcacctgtgatttgtgttgtcacgatttgcattactgatttcattctgtttctttcctaggttcaaaaactcattgcagaattgaatgaaattttggcgcatgatgttgttgatgaggcaggggcttggaaaagcaagcttcaaccagaatccaggcaactgtttgacttcctgcccaaaaccatccaggagcaacttttgcttgaaagagatcctcatggaaatgttcaggtaaacagttatagtcctcccttcgctgacatgactttttgctgaagagttggtcatactaagtccctaactggtgttggaaatttttgtttttaggttgcaaaaattgaaacagagaaaatgcttattgccatggttgagactgaattggagaagagaaaagctgaggggaagtaccccgcacatttcagaggccaatctcacttctttgggtatgtatgaattgttgcattttccaaaaaaataattccatctctaatgctgttgctgtgtaattttgcagatatgaaggaagatgtggccttcctactatttttgattctaactattgctatgcgttaggctacggttctggggcacttctccaatgtgggaagacaggactgattacgtcggtatgcacactatagttccctgtcacttgttggatacccagattggaacctaagaacgggctttgtggaagtgatgtttgcagcatgtttgtttacgaaccagcgcaggcagatgaacttctaatgatatgatcatgctcttatgtttgtatttttactcaggttggcaacctcgctgctcctgtggaagaatggaccgttggtggaactgcattgacatcgttgatggatgttgagaggaggcacggtaggtttctacagttccgttgtttgcacttggagattagctagctatgtttcattaaatttcttttgaccgtttattcaaatacctactatgtgattaaatcttcaagttacttttggaactaatttgggtcagattttcatataatatgcattgcattacctgtcatttccttgtttaaatcataaaactaatgtttttttttgttttctgcaatcaggaaagtacaagccagtgatcaagaaggctatggtggaacttgacggtacgaagcacttctattatcaacgctaacagtaatgtgatttatggacctttacccaaaatctcatttcatctatcatccattttcaggggcaccgtttaagaagtttgcttcattgcgagatgagtggtccctcaagaaccattacatcagccctggtacgtggacatgcaatagctagcaagtagtgcaaaatgactataacagcaacatagagaacaatgacatgtttaatttcttgcgaaacaggtcccatccagttcagtggccctggaagcaacgatgcgaaccacaccttgatgttggaactcggcgccgaggcatagagagacacgacgataccgacgtgtaccttttaaattttttgttcttacagttttgaaaagttgagatggaacctcgcagagtgacctgcaggctccatatttgtggagtgctcaataagaggttccattgggagtttctgtggagtagagatatgtgtaccaataataactgatgttagctttgcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0247500, RefSeq:Os06g0247500