Difference between revisions of "Os06g0251100"

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(Created page with "{{JaponicaGene| GeneName = Os06g0251100| Description = Membrane attack complex component/perforin/complement C9 family protein| Version = NM_001063830.2 GI:297605520 GeneID...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0251100|
 
GeneName = Os06g0251100|

Revision as of 20:20, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0251100

Description

Membrane attack complex component/perforin/complement C9 family protein

Version

NM_001063830.2 GI:297605520 GeneID:4340656

Length

5518 bp

Definition

Oryza sativa Japonica Group Os06g0251100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:7834429..7839946

Sequence Coding Region

7834429..7834710,7835221..7835462,7837415..7837616,7837710..7837793,7838189..7838372
,7838789..7838925,7839059..7839123,7839277..7839946

Expression

GEO Profiles:Os06g0251100

Genome Context

<gbrowseImage1> name=NC_008399:7834429..7839946 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:7834429..7839946 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaaggagcatggaggagatggagatcgccggcggcggcatggcggcggcggcggtgcagagggcggtgaggtgcctcggcagaggtgtcgacatggcgggcgacctgaggctgaagcactgcaaggatgagggaggttgtctcgttgccaggagcggcgagaaggcggcggcggtcgccgtgccgggcgtcggcgtcgtcgccggcgtgccggccgacgtgaagttcggcaagggcgaccgcatcaggttcaagtccgacgtgctcgagttcaacaagatgtcggatctgttcaaccaccggagctcgctgccggggaagatcccgtcgggcctcttcaactcgtgcttcgacttcggcagcgactcctgggccagcgacgccggcgacaccaggtgcttggccttcgacggctacttcatctccctcctcgacctccgcctcgactgccgcccgctcgccctcgctggccacgtcgtcgccgacgtgccggcggcgtgggacccatcggccattgcaagtttcatcgagaagtacgggacgcacatcatcgtcggattgagcatgggcggccaggatgtggtgtacgtgaagcaggacaagtcgtcgccgctgtcgccgtccgtgatcaaggagcacttggacaagcttggcgaccagctcttcactggcacatgcactcttcccccttcacactgcaagtccagagaccacaagttcaaggtccctgaggcattcaatgtgtttgatgcccaaatgacacggcagaggattgaaggaatgactgctccaatgtcatgcaaagagggtgtgacagtgatctactccaagaggggaggagacacggcggcgagcaaccactcggagtggctgccgacggtgccgttaatgccggacgccatcaacttcaagctcgtgcccatcacatcccttctcaagggagtagctggcgtgggcttcctttctcatgccataaacctctatttgagatacaaacctccagtagcagagttgaggtacttcctggacttccagcaccacagattgtgggccccggtgctcagtgacctacccctcggactgtgctccaaccggcaaggcactaaccctgctctacacttcagccttgtgattgttccaaaactgccaatcactgggatgagattgcaccttgaaggcaagaagaacaaccggttaggcatccacctgcagcacctgtcaacgacgccgacgttcatcgccggaggttggtcaggccggccgccggcgtggcgagggtcggaggcgatcgccgacgagcggtactacgagccggtccagcggcggatgttcgcccacgtctgcaccgtgccggtgaagcacgacccgcggtggctcgccgccggcgacggcggcggcggccggccggcggcgtacgtcgtgtccggcgcgcagctgcacgtcaaggcgcacgagtccaccagcgtcctccacctcaggctcctctacaccgagctgccggggcacagcgtggtgcagtcgagatgggcgcacggcggcggcggcggcggcgcggcgaggatgtccggcgtcaaggggagcttcctgtcgatgtcattcgcgtcgatggcggcggcggcggcggagaaagagcagcagaagcaggcggcggcgcggctcaacgtggactccggcgtgttcgccggagggccgccggcgccggtgggggcgcagcggctgctcaagttcgtggagacgtcgcaggtgaccatggggccgcaggactgtcccggctactggctggtcaccggagcaaagctcgacgtcgacaaggggaggatctcgctgcacgtcaagttctccctgcttgctccggtttcttga</cdnaseq>

Protein Sequence

<aaseq>MPRSMEEMEIAGGGMAAAAVQRAVRCLGRGVDMAGDLRLKHCKD EGGCLVARSGEKAAAVAVPGVGVVAGVPADVKFGKGDRIRFKSDVLEFNKMSDLFNHR SSLPGKIPSGLFNSCFDFGSDSWASDAGDTRCLAFDGYFISLLDLRLDCRPLALAGHV VADVPAAWDPSAIASFIEKYGTHIIVGLSMGGQDVVYVKQDKSSPLSPSVIKEHLDKL GDQLFTGTCTLPPSHCKSRDHKFKVPEAFNVFDAQMTRQRIEGMTAPMSCKEGVTVIY SKRGGDTAASNHSEWLPTVPLMPDAINFKLVPITSLLKGVAGVGFLSHAINLYLRYKP PVAELRYFLDFQHHRLWAPVLSDLPLGLCSNRQGTNPALHFSLVIVPKLPITGMRLHL EGKKNNRLGIHLQHLSTTPTFIAGGWSGRPPAWRGSEAIADERYYEPVQRRMFAHVCT VPVKHDPRWLAAGDGGGGRPAAYVVSGAQLHVKAHESTSVLHLRLLYTELPGHSVVQS RWAHGGGGGGAARMSGVKGSFLSMSFASMAAAAAEKEQQKQAAARLNVDSGVFAGGPP APVGAQRLLKFVETSQVTMGPQDCPGYWLVTGAKLDVDKGRISLHVKFSLLAPVS</aaseq>

Gene Sequence

<dnaseqindica>5237..5518#4485..4726#2331..2532#2154..2237#1575..1758#1022..1158#824..888#1..670#tcaagaaaccggagcaagcagggagaacttgacgtgcagcgagatcctccccttgtcgacgtcgagctttgctccggtgaccagccagtagccgggacagtcctgcggccccatggtcacctgcgacgtctccacgaacttgagcagccgctgcgcccccaccggcgccggcggccctccggcgaacacgccggagtccacgttgagccgcgccgccgcctgcttctgctgctctttctccgccgccgccgccgccatcgacgcgaatgacatcgacaggaagctccccttgacgccggacatcctcgccgcgccgccgccgccgccgccgtgcgcccatctcgactgcaccacgctgtgccccggcagctcggtgtagaggagcctgaggtggaggacgctggtggactcgtgcgccttgacgtgcagctgcgcgccggacacgacgtacgccgccggccggccgccgccgccgtcgccggcggcgagccaccgcgggtcgtgcttcaccggcacggtgcagacgtgggcgaacatccgccgctggaccggctcgtagtaccgctcgtcggcgatcgcctccgaccctcgccacgccggcggccggcctgaccaacctccggcgatgaacgtcggcgtcgttgacaggtgctgcaggtggatgcctaacctgatcatccatgacatttaaagttgttataacaatctaaaatttctcaaattcaaaaagaaaacaatctaaactttcgtatctaacttgtttaatcaacaattaaacaagtgacattagcaaagaaatgagagtagattattggtatctaaccggttgttcttcttgccttcaaggtgcaatctcatcccagtgattggcagttttggaacaatcacctgcattttgtttttttttttgtaattaagtgagcaaattctgttggatttgcagatgcaactagctggtaagcaatgtgaacaagatttgatttcttgcctggcttgagttgacatggagcttggagcctacaaggctgaagtgtagagcagggttagtgccttgccggttggagcacagtccgaggggtaggtcactgagcaccggggcccacaatctgtggtgctggaagtccaggaagtacctcaactctgctactggaggtttgtctgttgaggaacagtgccacaattatgtactgttaactacaactctagcatggactaatttagaatggtgaataaatgaaatttgcattggtagtgccattttggaaaacttgcctaaatgaaaatatgcatgtactattctctctaagtatgtatgctcctgggaacaagatatttgctccggtccaacaaaaattatctcgacgtaccggtacctcacagtacaaaatcatttccgatcgttggatctagcaatattcatcctacctagcgagatccaacgatcagaaatgatttggtaccgtgaggtatcggtacctcgagttacttttttgttagaccggagtaaatctcaaaacaatgtatatgatcttagcagattgcatagctgatgaaatgtgtgagagagctcttacatctcaaatagaggtttatggcatgagaaaggaagcccacgccagctactcccttgagaagggatgtgatgggcacgagcttgaagttgatggcgtccggcattaacggcaccgtcggcagccactccgagtggttgctcgccgccgtgtctcctcccctcttggagtagatcactgtcacaccctgcatatcagtcaaaaattcagtaatgatagatccctgcatgattaattctcttcaaggttcatcattagcagcaacattctgctagacagcattgtataatctagttcttttcatttctttggtacatattatactatattaatataggtaattttatcatccttcagatagtaccgggaagtaccatacttcctaatgtaaaatttgctacgttcagaactttagatactaagtacctcgaaataccaaaaaaaaatagtgtaaaatttaggtacctgagatatttttttaaggattataaaatttctcatattaatatagcgtagtaagagcctcttcctgttgtttgctgtaaaaaaaaagcagcctacaagtttgagcagctgtagtacctctttgcatgacattggagcagtcattccttcaatcctctgccgtgtcatttgggcatcaaacacattgaatgcctcagggacctattgcaaatcgacaattgaaatcattaaataagaaaattcagtttcagttttgacatgtttcaatgtacaattgttatttttcttttttaccttgaacttgtggtctctggacttgcagtgtgaagggggaagagtgcatgtgccagtgaagagctggtcgccaagcttgtccaagtgctccttgatcacggacggcgacagcggcgacgacttgtcctgcttcacgtacaccacatcctggccgcccatgctcaatccgacgatgatgtgcgtcccgtacttctcgatgaaactgctcaccgaattcagagagagcaacgttatatctagtaatcatcagaacggaaactggctgagaaattcagagagagtgtgacattataatcttcagagttcagacttgtggcgtgcatggactatatggaccggttcagagtctatcacgctttcatttttattttttatttttactgaaggactcaacggtgacatgttcagagttcagattacaatgatggaaaagaaggaataactaatctgtttcctgtctttgtcaattagcatgcactaatgttcagtctataaatttcagagacttcatatagaaaaactaaaaaatccctccgtatacgaatatactacctccatcctaaaatataaatatttgatgccgttgacttttttaaaaatgtttgaccgttcgtcttattcaaaaaatttaagtaattgttaattctttttctatcatttgatttattgttaaatatacttttatgtatacatatagttttacacatatcacaaaagtttctaaataaaatgaacggtcaaacatgtttaaaaaagtcaacggtgtcaaacatttagggaaggagggagtaagtatttctattttgtttagagttttttttttgaacgaacagtttgtttatagagattaaagttaaaaagaaaagacgtttggtgtttcttattaaataagggatggttgggatagggggatggttgggaggtgaaatgggaagaaatttgttacgtttatgaacaaattttaaacgctttaaatacttatatttacgaaagagggagtattacctattacctaaggcaaattttgcctattacttttgtgagatacttagtttccctgcagcactggtatgacacactgaatttgctttgagttcatgctcaagaccaggaacaagtccaaaatcatgaagctacctttttctatgctgtctacaatttgcagtcatctatatattctgtcctggttccaattttcttcgcgtgcttgtggaaaaaaaaactttttgtactatccatgcaaaattttcactccacatggcactagtgtattggatatatataattatgagctcgtggaaaaaacaaggtccaagttgccttcattatttaatcggcttagcctgtacggatatggctgtgttcgccaggcaaggttcccaaccgaaactgtacacgcgaaaaacgagacggtttattagcgcgtgattaatcaagtattagctattttttttaaaaaaagattaattttatttttaagcaactttcgtatataaactttttgcaaaaaaacgtactgtttagcagtttgaaaagcgtgtgctccaaaaacgagagagagaggggggttgggaaaagggtgtgcctaacacagcatatgtcctctttcgagtacagatgacataaatgttttattctatttttttaaaaaaaaaacatgacttaacaacaacatattcagatagtcgatgaaattattattattattattattgcttctgccggtgagtatgtatgtatagttatctcaaaataacttcatttctagtcattatcattcaaattagtatggagaaaaaaatatcaatgtacccctctaattaaatagtactaaaatagttttgatggatgcgtaaataaagggcatgttcactttgatgccaaaaaaaaacttgcctaaattttggcaggatatcttatatagttatcaaaatttgacagcaaactaaatatagccactttttttttttgataactttacaaaatttggtaagattgaaaatagtattaaagtgaacaggtccaaagagtatagaagggataaatattcttcgtttgcagataaggataggtaagtacataagagtacactttttttttcataaaaaatagtaaagatataagaataaatttattttcgaacgaagagaaaaccttgcaatggccgatgggtcccacgccgccggcacgtcggcgacgacgtggccagcgagggcgagcgggcggcagtcgaggcggaggtcgaggagggagatgaagtagccgtcgaaggccaagcacctggtgtcgccggcgtcgctggcccaggagtcgctgccgaagtcgaagcacgagttgaagaggcccgacgggatcttccccggcagcgagctccggtggttgaacagatccgacatctgcagatgaacgtgcggtcgaattaggaataattaattatcttttcatggttatttggttgaacaattattttgttttgtttttaaattttgttgttgtaggatgatgatttcttaactcgttgagactgtaagtagtacgcgtgttgttgacattatgctctggactctgattgtctgattatttttggaagaaattttgactttgatcatgattcaaatattaataacgtagtgaggaaaatagccttgagcttagacgaaacatagagatcaaagattagtagtaagaaataggtgaccactgttccatatgtccattttgtttggttatgaaaaagatttggcaaaaaagaagtaactgaacagtttttttttttttgtcaatcttttggataactctaaaaggagactttcatttgtgagcagctggcaattaattcgcttgcaatttgtgtcattttgaaccagcaaataaaatcaaatgaagcagcaaccaaatcaacgaaccttgttgaactcgagcacgtcggacttgaacctgatgcggtcgcccttgccgaacttcacgtcggccggcacgccggcgacgacgccgacgcccggcacggcgaccgccgccgccttctcgccgctcctggcaacgagacaacctccctcatccttgcagtgcttcagcctcaggtcgcccgccatgtcgacacctctgccgaggcacctcaccgccctctgcaccgccgccgccgccatgccgccgccggcgatctccatctcctccatgctccttggcat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0251100, RefSeq:Os06g0251100