Difference between revisions of "Os06g0275500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0275500| Description = Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1)| Version = NM_001063914.1 GI:115467559 GeneID:4340748| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0275500|
 
GeneName = Os06g0275500|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0275500

Description

Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1)

Version

NM_001063914.1 GI:115467559 GeneID:4340748

Length

8320 bp

Definition

Oryza sativa Japonica Group Os06g0275500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9352714..9361033

Sequence Coding Region

9353007..9353028,9353129..9353232,9353341..9353660,9354451..9354612,9355335..9355419
,9355536..9355685,9355772..9355819,9355889..9355957,9356081..9356784
,9357610..9357745,9357820..9358040,9358539..9358670,9359500..9359590
,9360062..9360109,9360188..9360316,9360541..9360810

Expression

GEO Profiles:Os06g0275500

Genome Context

<gbrowseImage1> name=NC_008399:9352714..9361033 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9352714..9361033 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcgattcccgaaatgagccgatgttttgcgaggaagggagcagtgaatcgggctatgttctatgtgttattgattcgctgaagaagaaaatcacatcggaccgctttgtttacatccagaaaagggtagaggagaatagcattaagcttagcccgattacactgcactctcacaatttgtcaaaaaataggcaaactagtacatccaacagtacagatttagtctcgaatttgctcacaaagaggaaagaagatgccctgtgtgctgtgaatagtcgtgagtcatctcctgatgaaagtgaaggtgccaattgccaagatgagtgttcatcgactgttattgtgggtggaaatctatccgcgaggaattctgtccgtccgattagactaccagaagtggcaacactccctccatatacaacttggatatttttggacaggaaccagcggatgcaagaagaccaatctgtacttggtcgtcgaaggatttactatgatacaaactgtggcgaagctttaatttgcagtgatagtgaagatgaagctgttgaggacgaggaagagaaaaaggagttcaaggattctgaagattgcataattcggatgaccattcaagaatgtggcatgtctgatgctgtgcttgaaactctagctcgagatatcgaaagggctcctgatgatataaaggccaggtatgagatcctacaaggggagaaacctgagggttcttccaagaaagtgtctgaacttaatgtcaaaatggaagacgtgtacggtgataaagatctggatgcagcattggattcctttgacaatctcttttgtcgccgatgtttggtttttgattgcaagctacatgggtgttctcaagatttagtatttccgactgaaaagcaggcaccattgtgcagctcggatgagggtacaccatgtggtattcactgttacaaactggtctctaaaccagatgctatcatggagattgattctcatttgcttgttgatgttgaggagccaacatcggacaatctaaaggatcagatagggtcaaataagaaaaagcttggttctagtgggcagaaaacaaaatctcaacaaagtgaaagttcttcaactgcaagggtttcctcagaaagcagtgagtctgaagtacaactgttaagcaataaatccccgcaacactctcctggcctctcaaaaaataagcttggcgcaaaaggtggaatcaagaaaagtactaacagaagaattgctgagagaattctaatgagtgtgaaaaaggggcaacaggaaatgtcaccggactctaattctattgttaatggatgccattggcctagggatatgaagcttagatctgatactaggagtggaattaaggattctgttgtatcctcacagtgtaattctccaagcacaaggagttttagaaagaagggcacacttcaaatggagaataactcatcttttgtggatgctcagagtgattcaatggaggatacaaataatgaacattcagcaacagatggttgtgatagttcaaggaaagaggaatgtgttgatgagagtatatgcaggcaagaagctcatggcaggtcctggaaagtgattgagcaagggcttctattgaaaggattagagatttttggaaagaacagttgtttaattgctcggaaccttctgggtgggatgaaaacatgcacagatgtttttcagtatatgaattacattgaaaacagcagtgcatctggagctcttagtggtgttgattctcttgttaaaggatatatgaagggtaatgaattacggacaagatcaagatttgtgagaaggcgaggaagggtccgccgtttgaagtacacctggaaaactgcaggctaccattttataaggaaaaggattacagaaaggaaggatcagccttgtcgacaatacactccttgtggttgccagtctgcatgtgggaagcaatgtccatgtctcacaaatggtacctgctgtgagaaatactgtgggtgcccgaaaatgtgcaagaatcgcttccgaggttgccattgcgcaaagagtcagtgtcgcagccggcagtgtccatgctttgctgctgacagggaatgtgatcctgatgtgtgtagaaactgctgggtagggtgcggtgatggtacattgggagtccctaaccaaagaggtgataattatgaatgccggaacatgaaactgctgcttaaacagcaacaaagggtcttacttgggagatctgatgtttctggctggggagctttcctcaagaatagtgttgggaagcacgagtatcttggcgagtacactggggagcttatctcccataaagaagctgacaagcgtggaaagatatatgaccgtgagaattcatcgttccttttcaacttgaacaatgagtacgttcttgatgcctacagaatgggcgacaagctgaagttcgccaaccattcccctgatccaaactgctacgccaaggtcatcatggtagcaggcgatcacagggtggggatcttcgccaaagagcggatcagcgcgggcgaggagctgttctacgactaccgctacgagcccgaccgggccccggcgtgggctcgcaagcccgaggggcccggtgccaaggacgacgcccagccttccaccgggagagcaaagaagctcgcccactga</cdnaseq>

Protein Sequence

<aaseq>MAGDSRNEPMFCEEGSSESGYVLCVIDSLKKKITSDRFVYIQKR VEENSIKLSPITLHSHNLSKNRQTSTSNSTDLVSNLLTKRKEDALCAVNSRESSPDES EGANCQDECSSTVIVGGNLSARNSVRPIRLPEVATLPPYTTWIFLDRNQRMQEDQSVL GRRRIYYDTNCGEALICSDSEDEAVEDEEEKKEFKDSEDCIIRMTIQECGMSDAVLET LARDIERAPDDIKARYEILQGEKPEGSSKKVSELNVKMEDVYGDKDLDAALDSFDNLF CRRCLVFDCKLHGCSQDLVFPTEKQAPLCSSDEGTPCGIHCYKLVSKPDAIMEIDSHL LVDVEEPTSDNLKDQIGSNKKKLGSSGQKTKSQQSESSSTARVSSESSESEVQLLSNK SPQHSPGLSKNKLGAKGGIKKSTNRRIAERILMSVKKGQQEMSPDSNSIVNGCHWPRD MKLRSDTRSGIKDSVVSSQCNSPSTRSFRKKGTLQMENNSSFVDAQSDSMEDTNNEHS ATDGCDSSRKEECVDESICRQEAHGRSWKVIEQGLLLKGLEIFGKNSCLIARNLLGGM KTCTDVFQYMNYIENSSASGALSGVDSLVKGYMKGNELRTRSRFVRRRGRVRRLKYTW KTAGYHFIRKRITERKDQPCRQYTPCGCQSACGKQCPCLTNGTCCEKYCGCPKMCKNR FRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGVPNQRGDNYECRNMK LLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDRENS SFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEE LFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLAH</aaseq>

Gene Sequence

<dnaseqindica>294..315#416..519#628..947#1738..1899#2622..2706#2823..2972#3059..3106#3176..3244#3368..4071#4897..5032#5107..5327#5826..5957#6787..6877#7349..7396#7475..7603#7828..8097#cttccctttcctccacccacgccgcgacgacgagtcgccgccgcggcctcgccggcgaccaggtctccggcggccccgccgcccgccgtgacggggctccggccttccgccctcctccccgcaccgcccgctatctcggctccccgactcctgcattcccccgactctcccccggccgccgccgccgccatttctgactctttctccgcggcgcgtctctcctccgagagcacgccgaccgcctcccgaagcggcgtcgcggccgcggcggccgccgccttctcccgcccctgatggctggcgattcccgaaatgaggcgggttctttctcctttgcctttttttactgctcggatgaaatttgaatctgtgtatgcttgtggttgtgatgaaatttagcttgttctgtccccgcagccgatgttttgcgaggaagggagcagtgaatcgggctatgttctatgtgttattgattcgctgaagaagaaaatcacatcggaccgctttgtttacatccaggtgatttgatttgatttgattgtttggagctgcaaatctcggtcattttcttgtattttctttatttaccagctgattagttttgttccccgtgatctttttttccagaaaagggtagaggagaatagcattaagcttagcccgattacactgcactctcacaatttgtcaaaaaataggcaaactagtacatccaacagtacagatttagtctcgaatttgctcacaaagaggaaagaagatgccctgtgtgctgtgaatagtcgtgagtcatctcctgatgaaagtgaaggtgccaattgccaagatgagtgttcatcgactgttattgtgggtggaaatctatccgcgaggaattctgtccgtccgattagactaccagaagtggcaacactccctccatatacaacttggatatttttggacaggtgcattttcttgacatccctaagatccctgcttaaattacatagttatcatggaaagttatagcgtatacactttattatccattagcaacaacatagcaatactatttcatttctcttgctaaacagtaaacacacgctcatttgtggtctttagttttttgtgcaacaatctattcagtcaaacatagtttttccgacctaatgctttatgtctctggtgattttttttctcttcatgtgtaaatgtgtaatggagatattgcctttcgttcttactataagcttgggaaatggtatagtataaaaatggaacaagtccttatgcggccccttgctacgtgccccacctctctcttaatcacatgcagttgcagacttgcaggctgggagtgtgtgttaaaacaagagcagcaaatgccacattgactgccttgaattcatcttcttggctttggtagcaaagctattgtgccagaaccattggctttgcctgctgcagtgtttcttttgcttttgctgtttcatccgctttatgcttcttagtgttctctttgctattgcgtgattttgtggagcagcaagcaaaaaatcagactgaaacatgtttttgatgaattgtttgttgatatgaatttaacagtatatctcatatgacaaacttctatttttctaaataagtaatgcaaaacatgcatggtcacagttacaatccagcatacttttagtttggagaggtagggcatcttaaggtttgttgaaatataagattttacaatctttcgtgcaggaaccagcggatgcaagaagaccaatctgtacttggtcgtcgaaggatttactatgatacaaactgtggcgaagctttaatttgcagtgatagtgaagatgaagctgttgaggacgaggaagagaaaaaggagttcaaggattctgaagattgcataattcggtaaatatgctttggacatgcatttgttttcttttgccttgaacattcactaaggatgctcaacttgtttgaccgttacaggctcatgggaccaagatacaggtgcagttaccatagcacctggagcttgggctcagtccatagaataacagatctgatgactctgtagtaatagtttcatggagaaatgctttcttctgtaagcattttgtcatattctctgtttttcttttgactgggaaaactaccaggactttgcctagtagtgtaatttcattaaagaataaaaaatagtaatattctctttttgaagtcacaatataacatagtacagaagcaatagagaaatgatattaaatatactggtcaagtaacatttggtatgaaatattcccaagagattatttagtaaaactacattattaaaaacttgtaagaaaaagggtttggttttggggcatatgtcttatatcattaaatgaaatggtcattaccagttttatctacattgttccaggggaaaaccttgagctggtcacactgcatatttgacctggttttgttttgtgcaacccttgcacaagcaagaaaagtatggttacagcattaatctgagttgtttgtggattaatttagaccttaaacatcatagatcacaataatttggtttctcctgtatggaattcttccacttaagggtgattttgtgcaatgattgccaggatgaccattcaagaatgtggcatgtctgatgctgtgcttgaaactctagctcgagatatcgaaagggctcctgatgatataaaggttcatacaacatttattcaatctcacgtcacatttgcatttgatccatttgggattttcctcttccaacttattgtttcatttctgaaaaattaaattacgtgtctattttccaggccaggtatgagatcctacaaggggagaaacctgagggttcttccaagaaagtgtctgaacttaatgtcaaaatggaagacgtgtacggtgataaagatctggatgcagcattggattcctttgacaatctcttttgtcgccgatgtttggtacgttttctgttaattgtcatgtgtgttttacataatatctctggtttactgatgaaacattctgctcattttgatgttggaaggtttttgattgcaagctacatgggtgttctcaagatttagtatttccggtaattttcaaaccaatgagttatttcctaaacttgtgtgttgttctaattagtgtccttttcgtatagactgaaaagcaggcaccattgtgcagctcggatgagggtacaccatgtggtattcactgttacaaactggtctgtattttataggcatatgactgtggaaaagcagctcttcttttatgatgatttagatatccgaaacataagcatatgccgttttgctgatctttacctcatttataatctttttgtcaggtctctaaaccagatgctatcatggagattgattctcatttgcttgttgatgttgaggagccaacatcggacaatctaaaggatcagatagggtcaaataagaaaaagcttggttctagtgggcagaaaacaaaatctcaacaaagtgaaagttcttcaactgcaagggtttcctcagaaagcagtgagtctgaagtacaactgttaagcaataaatccccgcaacactctcctggcctctcaaaaaataagcttggcgcaaaaggtggaatcaagaaaagtactaacagaagaattgctgagagaattctaatgagtgtgaaaaaggggcaacaggaaatgtcaccggactctaattctattgttaatggatgccattggcctagggatatgaagcttagatctgatactaggagtggaattaaggattctgttgtatcctcacagtgtaattctccaagcacaaggagttttagaaagaagggcacacttcaaatggagaataactcatcttttgtggatgctcagagtgattcaatggaggatacaaataatgaacattcagcaacagatggttgtgatagttcaaggaaagaggaatgtgttgatgagagtatatgcaggcaagaagctcatggcaggtcctggaaagtgattgagcaagggcttctattgaaaggattagagatttttggaaagaacaggttggtcccttgaaatgatcagcttcatatgaattatttcactaccttctacttcatcttaatatttgtatactattgcacaactaactgctgtatctgttcaggacagagtaaacgttaatgtgtctaatccctccgtcccaaaatataaggcgtgctttgacttttaattgtcaatttctcacaagtatactgtctatactctatagtggaaccaacatcatatgaaagtacattcaaatatgaatctgacaataccatttttatatcactaaacctatatattgtcagactagttgtgagtcaagatttgtaaaatttgaattttaaaatgcgtgcacaccttatattttggggtggagggattaacctttcagttcagcacaagaaactgactatgctttcttttaatatatctgtattactaaaagtattcaacacaaatgtctatatttaaagcaaatgctcttgcatcataattagacatccccgaaactatattcttatactactacatttcaagtaaaagctgtaacatgaagatacaatctacaatttgtcatgcataacgtattggaatgcggaattaactggaatttctaatgtttgcatcatttagtatctagttgtgttagttatagcgtttcatgtacaagaaattctgatgtatgttcatttcaaatgccttaaaaactcattcctgttttctttggatgtcttgcaagcatattggaaatgttctttatcctttctataatgagtagaataccttgttttccctaatttgaatagtcatactgagcccttgtttttcctatgttgaagttgtttaattgctcggaaccttctgggtgggatgaaaacatgcacagatgtttttcagtatatgaattacattgaaaacagcagtgcatctggagctcttagtggtgttgattctcttgttaaaggatatatgaaggtaggattcatcataaagctcatttacttgtattttcccaaggtttcatcttactttaatgcttgaactcccagggtaatgaattacggacaagatcaagatttgtgagaaggcgaggaagggtccgccgtttgaagtacacctggaaaactgcaggctaccattttataaggaaaaggattacagaaaggaaggatcagccttgtcgacaatacactccttgtggttgccagtctgcatgtgggaagcaatgtccatgtctcacaaatggtacctgctgtgagaaatactgtgggtgagctacttcaattattcatattgcagactccgagaacattttttcttctagatattaataatgttgcttatgaaaacaaaactgtgtagatgtatacaatttcaatattgtttggttagtgccgaccaattatgtcgtatgatcacatcttagttttgcaatcattgctgcttactgaaaaggaaaggaaaataaaacctaggaggaactaggcaccctttcaattaagaggaaaacaggcaccaaatttctagttgaagaggacttgaaccttgatggtgggagagtgagggtgtaaactccgcatttctcacccaaatggtgaatcaaacacatgcttctcttttgttctgtgtgctcttttggctattagctattacttattttgataatttataattttaattggaataaatgatgcaaacacatggagtgcaaatgtttgctgtccgcatcctgctgatgcaagttgaagtaatcctttctgcgttgcaggtgcccgaaaatgtgcaagaatcgcttccgaggttgccattgcgcaaagagtcagtgtcgcagccggcagtgtccatgctttgctgctgacagggaatgtgatcctgatgtgtgtagaaactgctgggtagggtatgtattttaaattctgatgaccctttgaatgattttgctagttaatgcacatttgtatatcttagagaaaggcaccaactataatgtgcttttcattctttgcacttctccaaccttacatctaccttgaaagttgagaaattaccacctatgcctgcacttgaaggatggaattttgatggatgatggatttatccttaagtgcaggaagaatcttgcatatgtatattccagtatctgaagatacggagttctgcagtaaaatatcttaatggtagaattgaatttaattaatataatcatatcaattgcttgcccaacagtcccaataggcaatagctacattccacaattaaaaaaatggtgcaataataataatttgacatttccttctcataccatttgctagcatacttgatagtgtgtgccagcacattgacaattgatattctatatctaaattatttataacaatatctgagttttataggagtgtttaccaggagttaatccatgaaaaatgtatcaatgatgggggagtttaatttgaatttgttatgaacgagcttctaatggtaggaaatgaaattttagatactgtaagttgttaggcaaacaccaaagatgagtatattatccggccagtgtgtaaatccaatcatgatcctttttcactccatggaaccttaaatatgctttctgttattcattgttgaaatagtctgttattcaatttcaattactgtttcttcatccctaatttttctagaacaaagcgccagtacattgaacttctatttttctacctgtactttctattgtgcaggtgcggtgatggtacattgggagtccctaaccaaagaggtgataattatgaatgccggaacatgaaactgctgcttaaacagcaacaaagggtaaaccttttgcactttgatttattcatgctattgcaccttggttataatttcgtcaagcctatcgattttttatgcctgcttggcccttccatttgcctttattcgatgctttgatatttttgtgtgaggaggcttgaggtctaagttaattacccagcagtacttctcaatagttttattctttttttttaatatttttcacgtgagttcaaattccagttgtctaaatacaaaagatcttaagtttaataccaaagaaactagttagagtaactatattccaaaacaggcaatgaactatgaaccaaaaaacttcccattagcaggaaaataattgcataaagtatctatcgattatgttggtgaatttatgaaacaccagggggtgttacttcattttctattacaggtcctattccatctctaaatatctgtaaatagtattgacttgctatgtgcactcttcaggtcttacttgggagatctgatgtttctggctggggagctttcctcaaggtaagatttctctattgacccttttcctccctcataggacgtaccctcatctaactagtccttttcctaaatcttcagaatagtgttgggaagcacgagtatcttggcgagtacactggggagcttatctcccataaagaagctgacaagcgtggaaagatatatgaccgtgagaattcatcgttccttttcaacttgaacaatgaggtgagtgcaaagacaccccgcaaattacggtctgcaagcattcaggattgcatactgtactgatttgactagcctaatgtcatccttttgcgtgaaccgagttgtttacatccccaacccactgttgttcaatatcgcgcgatttatgatccgctgcagtgttttcgctgttttcgccagtaccggatgctcactcactcactttaccctctcgatgaatgcagtacgttcttgatgcctacagaatgggcgacaagctgaagttcgccaaccattcccctgatccaaactgctacgccaaggtcatcatggtagcaggcgatcacagggtggggatcttcgccaaagagcggatcagcgcgggcgaggagctgttctacgactaccgctacgagcccgaccgggccccggcgtgggctcgcaagcccgaggggcccggtgccaaggacgacgcccagccttccaccgggagagcaaagaagctcgcccactgaagaagaagaagaagaagaagatcagccgttgattcttttgttgtcttggttgattctttcgttattggtgagggggaccgagaactctgacggtgattagcgccgtaaggaaaactttcctgccattcgttggccccctcgattcgattcgttgattttccctgaattctgtaactgctgcacctgtcgccagttcaacttcaaaagatttttctgattctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0275500, RefSeq:Os06g0275500