Difference between revisions of "Os06g0275800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0275800| Description = Amino acid/polyamine transporter II family protein| Version = NM_001063917.1 GI:115467565 GeneID:4340751| Length = 2...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0275800|
 
GeneName = Os06g0275800|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0275800

Description

Amino acid/polyamine transporter II family protein

Version

NM_001063917.1 GI:115467565 GeneID:4340751

Length

2931 bp

Definition

Oryza sativa Japonica Group Os06g0275800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9395138..9398068

Sequence Coding Region

9395466..9395847,9396259..9396411,9396520..9396723,9396893..9397358,9397618..9397759

Expression

GEO Profiles:Os06g0275800

Genome Context

<gbrowseImage1> name=NC_008399:9395138..9398068 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9395138..9398068 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggaggcgtcacggagcggctcccggagggcagcagcgagccgctgctcccgacgaagcgggagggcggcggcggcggcggcgagttcgccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatggcgctgccggccacgatgaaggtgctggggctcgccccggggctcgtcgcgatcttgctcgccgcgctcctcaccgacgcctccatcgagctgctcgtccggtccagccgcgccgccggcgcgccgtcgtacggcgccgtcatgggggacgcgttcgggtggtgggggaggcggctgctccaggtctgcgtcgtcgtcaacaacatcggcgtcatgatcgtctacatgatcatcatcggtgatgtgctatctggaacctcctctggtggtgagcaccattatggtgttttagaaggatggtttgggccacaatggtggaacgggcgtttctttgtcctcctggttacaactcttgttgtatttactccactggcatgtttgaagcgtgtcgattcactgagttacacatctgccatatccgttgctctggcagttgtttttgttattattactgcaggaattgctattgtcaagttgataaagggacaaattccaatgcctaagttgtttcctgatgttcccgacttggcatctatttgggaacttttcacagcagtgccagttcttgtcactgcttatgtttgccattataatgtccacccaattcataacgagctgaaggacccttctcagattaagccaatagtacacacatcattggttctatgctcaactgtctatatcacaacaagtttctttggatatctcctctttggtgaatctacgctgtctgatgtgctcgccaacttcgactccaatcttggtattccatacagtcagatgctaaatgatgctgttagagtgagctatgctgttcaccttatgcttgtgttccccatgatattccatgcactacggcttaatttggatgggcttctcttttcctcatcaagtcctctgtcttccgacaaccgaagattttctgtaatgacagcggtacttctcctagttattttcctatcagcgaatttcattccgagcatctgggatgccttccaatttactggtgcaactgctgctgtgtgtatcgccttcatttttccagccgcgatcactctaagggatccacacagtatagcaaagaagtgggacaaaatcctgtccatcttcatgattgttcttgcaattgtatcaaacgtagtagctgtgtatagcgatgcatattcaatgttccacaggaaaagttccccttccatagcctga</cdnaseq>

Protein Sequence

<aaseq>MGGGVTERLPEGSSEPLLPTKREGGGGGGEFAGAVFNLSTTIVG AGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVRSSRAAGAPSYGAVMGDAFGW WGRRLLQVCVVVNNIGVMIVYMIIIGDVLSGTSSGGEHHYGVLEGWFGPQWWNGRFFV LLVTTLVVFTPLACLKRVDSLSYTSAISVALAVVFVIITAGIAIVKLIKGQIPMPKLF PDVPDLASIWELFTAVPVLVTAYVCHYNVHPIHNELKDPSQIKPIVHTSLVLCSTVYI TTSFFGYLLFGESTLSDVLANFDSNLGIPYSQMLNDAVRVSYAVHLMLVFPMIFHALR LNLDGLLFSSSSPLSSDNRRFSVMTAVLLLVIFLSANFIPSIWDAFQFTGATAAVCIA FIFPAAITLRDPHSIAKKWDKILSIFMIVLAIVSNVVAVYSDAYSMFHRKSSPSIA</aaseq>

Gene Sequence

<dnaseqindica>329..710#1122..1274#1383..1586#1756..2221#2481..2622#aattgatctgcttcctcctcccctcctctcatgtcattgtcctgcaatacacgaggagcaaagagttgtgtgtaatcctcctcctactctgggtcagctcttaatcccttcaacttccgtcggttggacgccaccggaagccaatccctgtttggtgttttacccccaattttgtcagattttttggagcgaaaccacgagctgtttgaagtgttcggcttcggaatctctttcttggagttctaggaatggggttttgatacaaagattgaagcctttttgttagcgttggtgcaaagattgtattgtattgttttttttttctgcgatgggtggaggcgtcacggagcggctcccggagggcagcagcgagccgctgctcccgacgaagcgggagggcggcggcggcggcggcgagttcgccggcgcggtgttcaacctgtcgacgaccatcgtcggggccggaatcatggcgctgccggccacgatgaaggtgctggggctcgccccggggctcgtcgcgatcttgctcgccgcgctcctcaccgacgcctccatcgagctgctcgtccggtccagccgcgccgccggcgcgccgtcgtacggcgccgtcatgggggacgcgttcgggtggtgggggaggcggctgctccaggtctgcgtcgtcgtcaacaacatcggcgtcatgatcgtctacatgatcatcatcggtaaaaaaaaaattcgatacaacaacctgaattttgacttcaatattgccttcactatttagttgttcatgtgactctagaattgctgaatatttcattttcttttttacttataaccatttctctagaagttatatcatcagtatcggttcgtgtggaatgtagagtagattgcaaattctgaactaactcaaatgcaattgagtaatcgattgaggaagtttggccttctaattgtgaactgtaggatatgatgccttctgaataaactcggcagttttgcttacatgtgagatttaagttgcgttctgcattgtgctgtagataatcgtaactgtttatttgaggccataatttcgtgctgaggcatggcagtgtatctgacatacacattggggtacttcactctaggtgatgtgctatctggaacctcctctggtggtgagcaccattatggtgttttagaaggatggtttgggccacaatggtggaacgggcgtttctttgtcctcctggttacaactcttgttgtatttactccactggcatgtttgaagcgtgtcggtaagtagtctcttcacttagccttatactttcgtgagattttattttgtaccattttgtcgtactgccaattcatgacatcgctatgtttttgtttgtttcttgcagattcactgagttacacatctgccatatccgttgctctggcagttgtttttgttattattactgcaggaattgctattgtcaagttgataaagggacaaattccaatgcctaagttgtttcctgatgttcccgacttggcatctatttgggaacttttcacagcagtgccagttcttgtcactgcttatgtttgccattataatggtatgagacaaattgaagttttgacttgttggtgcattataaaattttattttagtagggaagactttctttcaattttcttttagataatgtcctgatgtcttataaaagcccgaatagggttgcttacttctaagttttctaaagagatttgattgatattttgcagtccacccaattcataacgagctgaaggacccttctcagattaagccaatagtacacacatcattggttctatgctcaactgtctatatcacaacaagtttctttggatatctcctctttggtgaatctacgctgtctgatgtgctcgccaacttcgactccaatcttggtattccatacagtcagatgctaaatgatgctgttagagtgagctatgctgttcaccttatgcttgtgttccccatgatattccatgcactacggcttaatttggatgggcttctcttttcctcatcaagtcctctgtcttccgacaaccgaagattttctgtaatgacagcggtacttctcctagttattttcctatcagcgaatttcattccgagcatctgggatgccttccaatttactggtgcaactgctgctgtgtgtatcgccttcatttttccagccgcgatcactctaaggtaagttaatggattaatgttcattgtgatgcttttattttgttccacctctacatatattatgaaaaaatggctgggatatttattccgttatctcaaaaaaaaaaagtgttatagtacttctgctaacatgcacgaagagaagtgaagaattctacatttgcagatttccacactgtagtaattgcttgttttgatatcaccttttcaatgttgtgatgttatggctgtctaatttattttgcttctaattttgcagggatccacacagtatagcaaagaagtgggacaaaatcctgtccatcttcatgattgttcttgcaattgtatcaaacgtagtagctgtgtatagcgatgcatattcaatgttccacaggaaaagttccccttccatagcctgatattccaaaatcctattggcgagtcagtggattctttatctgaaagatggcttgtacattagctagcaaataaaatcattatttaggcaagtatttacgggatttattttacggtttatttggcaaacaacccttgactcaattatgttgagttggatgtatctataggatgggtgtgtaaactttggtccgaagtgttttagtccaatgtacaattcaagatcaatttgaatcaaatgtgaattatggagttattattgtaacaaaagataaacaattattttttcgaatgtaaatcactgaaatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0275800, RefSeq:Os06g0275800