Difference between revisions of "Os06g0277900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0277900| Description = Protein of unknown function DUF239, plant domain containing protein| Version = NM_001187782.1 GI:297724694 GeneID:927...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0277900|
 
GeneName = Os06g0277900|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0277900

Description

Protein of unknown function DUF239, plant domain containing protein

Version

NM_001187782.1 GI:297724694 GeneID:9272107

Length

2589 bp

Definition

Oryza sativa Japonica Group Os06g0277900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9563357..9565945

Sequence Coding Region

9563357..9563737,9563896..9564042,9564155..9564208,9564876..9565046,9565188..9565415
,9565826..9565945

Expression

GEO Profiles:Os06g0277900

Genome Context

<gbrowseImage1> name=NC_008399:9563357..9565945 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9563357..9565945 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcagcgaggacgtggagtaggcgaggcttggtggcgctcctcctgctggctatgatcttcccaagcttattgtcgccatcggatgctacttctacttatttgaggcggcggcagatgcagccttccagccagccaagtggcctatatggagaagcaacacgtccattcacccaaacatggaatcagaacggcgaaaagtgccctgacaacactataccaatccgaaggaccaaggaggaggatgtcatgagggccacctctcttacaacgtttggcaagaagacgcacgacatgagctctcaccctcactctcacttggctggtgtcacaagcggccactactatggtgtagcatatgcaaccggagatgccaactactacggaaccaaagtgaccatcaatgtgtggcaaccaacgattgcaacatctggtgatttcagcctgtcccaactatggatctcagcgggctcctatgataacaaggaccttaataccattgaaacaggatggcaggtgtacccagctatgtacggggatgacaaaactagactcttcatctactggactcgtgatgcatataacgaaacgggatgttacaacctagcatgctcaggattcatccagacaaacccgcagttcgtcatcggtggcagcatatcccctgtctccacctatggtgacacacaatatgagtacgattatttagtttggaaggacccagcggggggcaattggtggttgcaagtgcaaggcaataatgtgggctactggccatcatccatcttcaccctcctgcagacaggcgttgccgacagtgtggaatggggtggggaggtgaattcgcctcaaattaccacacccatgggtagtggacattttcctgaggaagggttcggcaaggccacctacagcagagcaatccaagttgttgattcctccaacaatctcaaaccaccaaatggtgtgggcttgatagctccgttgcccagttgctataacgtcatgactggttcctccagtaccaccagttggggcacttacatctactatggcgggcctgggtgccctcaaaactctcaaattgaagtgatgtag</cdnaseq>

Protein Sequence

<aaseq>MAAARTWSRRGLVALLLLAMIFPSLLSPSDATSTYLRRRQMQPS SQPSGLYGEATRPFTQTWNQNGEKCPDNTIPIRRTKEEDVMRATSLTTFGKKTHDMSS HPHSHLAGVTSGHYYGVAYATGDANYYGTKVTINVWQPTIATSGDFSLSQLWISAGSY DNKDLNTIETGWQVYPAMYGDDKTRLFIYWTRDAYNETGCYNLACSGFIQTNPQFVIG GSISPVSTYGDTQYEYDYLVWKDPAGGNWWLQVQGNNVGYWPSSIFTLLQTGVADSVE WGGEVNSPQITTPMGSGHFPEEGFGKATYSRAIQVVDSSNNLKPPNGVGLIAPLPSCY NVMTGSSSTTSWGTYIYYGGPGCPQNSQIEVM</aaseq>

Gene Sequence

<dnaseqindica>2209..2589#1904..2050#1738..1791#900..1070#531..758#1..120#atggcagcagcgaggacgtggagtaggcgaggcttggtggcgctcctcctgctggctatgatcttcccaagcttattgtcgccatcggatgctacttctacttatttgaggcggcggcaggtcctcaagcgcctcaacaagcctcctctcgcaaccattcaggtacctatataggttatatagttgcatgcaaattagctaattattactacatacatacatatatatatatatatatatatatatatatatatatgatcataaattaactgcgtgcatgcagagcccagatggagatatcatagactgtgtgcacatctccagacagcctgcattcgatcatcctctcctcaaggaccatacaatccaggtgaattaacttcatatataattaattccactctacaccaccaatataatataatatacgcatgatatcttcttgttttcacgaacgacaaaataattgtacgtcaatatattagatgcatgatatcttcacgtacgagtaatatgcctgccggtttcagatgcagccttccagccagccaagtggcctatatggagaagcaacacgtccattcacccaaacatggaatcagaacggcgaaaagtgccctgacaacactataccaatccgaaggaccaaggaggaggatgtcatgagggccacctctcttacaacgtttggcaagaagacgcacgacatgagctctcaccctcactctcacttggctggtgtcacaagcggccactacgtatagtaccaccctcaactcatattacaactagcttgtcttccttgatcttggattattattattattattattattattattattattattattatacttttcaaaatacattttcttatttaatctcccattgaacagtatggtgtagcatatgcaaccggagatgccaactactacggaaccaaagtgaccatcaatgtgtggcaaccaacgattgcaacatctggtgatttcagcctgtcccaactatggatctcagcgggctcctatgataacaaggaccttaataccattgaaacaggatggcaggtacgtgacaccttaagagcaagatctttataagagctagttaccttcaaaatcattctatgtcatcaaaagctaacatagagccaattagtataatagttacgcataaacatacactacatcattaatatatggaccacctcctatacacatgtaatgtctaacttgaagttagtgctatagctgagtgtaactctgtagctcgcttttcttctttctctcctcttatctctccttcacataagtataagtataagtatgatgtggtaattttttaagccagcttatgtcacttatatattgtactcgctctaagtgcgtcagaggggaaaaagtaagttctattaagtcctacctgcatgtcttgcaatttccatgcataatccattcatacaagctcttatctttgtgcatgccctgatgtccatgttatctacaactagcattgaagataactttatacggattccatgtttaattttcatatatataaggatgccacaattaatgtaactacataatctcgataagtggccagccttatggatatatctatctactaataatatcaccgtctgttgtacgagtactaagcattaatattgcaatatttgtgcatatattctcttacgatgatggctctaagctatccatatcaatgtttcaggtgtacccagctatgtacggggatgacaaaactagactcttcatctactggactgtaagatatatatattcctttattattagtaacaattaatatttcgcccctgttatattatggtggggaattaattgatggcgtaaaggtactaatgaaatatatattgtagcgtgatgcatataacgaaacgggatgttacaacctagcatgctcaggattcatccagacaaacccgcagttcgtcatcggtggcagcatatcccctgtctccacctatggtgacacacaatatgagtacgattatttagtttggaaggtaaaccgtacacaaaaattaagccctttaacattcaaataaagcatatatacaaaatcaaattcttcaagaatgggcatggagaatctgtgtcatctagctactgattgatcttgtccttcctccagtaaatgacgaatgaatacataaatttgcaggacccagcggggggcaattggtggttgcaagtgcaaggcaataatgtgggctactggccatcatccatcttcaccctcctgcagacaggcgttgccgacagtgtggaatggggtggggaggtgaattcgcctcaaattaccacacccatgggtagtggacattttcctgaggaagggttcggcaaggccacctacagcagagcaatccaagttgttgattcctccaacaatctcaaaccaccaaatggtgtgggcttgatagctccgttgcccagttgctataacgtcatgactggttcctccagtaccaccagttggggcacttacatctactatggcgggcctgggtgccctcaaaactctcaaattgaagtgatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0277900, RefSeq:Os06g0277900