Difference between revisions of "Os06g0297800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0297800| Description = Similar to No pollen| Version = NM_001063974.1 GI:115467679 GeneID:4340810| Length = 8019 bp| Definition = Oryza sa...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0297800|
 
GeneName = Os06g0297800|

Revision as of 20:21, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0297800

Description

Similar to No pollen

Version

NM_001063974.1 GI:115467679 GeneID:4340810

Length

8019 bp

Definition

Oryza sativa Japonica Group Os06g0297800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11114381..11122399

Sequence Coding Region

11114985..11115336,11116308..11117585,11117940..11118122,11118214..11118497,11118587..11118703
,11119370..11119632,11119801..11119969,11120082..11120354,11121716..11121910

Expression

GEO Profiles:Os06g0297800

Genome Context

<gbrowseImage1> name=NC_008399:11114381..11122399 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11114381..11122399 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggctgctggtgcaggtgagcgaggcacgcaacctgccggcgatcgacggtggcggcgggctgagcgacccgtacgcgaagctgcagctggggaggcagcgtggcaagaccagggtggccaagaggacgctgagcccgacctgggacgaggagttcgcgttccgggtggtggacctcaaggacgagctcgtggtggtggtcgtcgacgaggacaggtacttctccgacgacttcctcggccaggtcagggtgcccctctccgccgtgctcgacgccgacaaccgctcgctcgggacgcagtggtaccagctgctgcccaagagcaagaagtccaagatcaaggattacggagaaattcgtcttacaatatctctctctctaaattaccctgaagagacaacgacacttgcacattgcgtttcagatgacctcgcgtcatattctgacaaatcaactgaattacagaaaggatcttctttgccaaatattcctatagaaatacccacgtcagtatcagggggtgatgaaacagaaatcatcaaggaggatagatcaaatggtgtcccatcatttgtcaatcgtctgtatcaatttttctcagcgaaaccaaaagatgcagaagcttcagcttcagctccacctctcactacgggcgatggtaattcagatattcttgaagaaacaccatcaactagttcagaacttcctgataaccaggattatgaaactggtgtaactatgtcctttgatgaacaactaaaagcctttggatcttgccatgaagggaatgaaatacctgaaaacttgtcaggtggagttcttattgatcaagtttatgctgttgcacccagtgacttgaatggacttcttttctcaccaagttcagatttcttgcaatcactagcggagatgcaaggaactactggtcttgaaatccaacaatggagacttgaaaatgatggtgaggtcttgaagagggtagtaagctacacaaaagctcctactgcactagtcaaggctgtgaaagcaacagaggatgtgtcatatctgaaggcagatggagatatatatgcaactttagctgatgttagtactccagatgttccatttgggaattcttttagggtggaggttttaacatgcataatgccagggcctgaactacctgataatgaaaaatcctcacgtcttgtagtctcctggcgcttgaattttatccagagtacaatgatgaagggcatgatagaaaatggggctaaacaagggttgaaggataactacattcagttctctgaactcctggctcgaaatatcaggccagttgattcaaaagatgcagcagctactgataaagttttgtcttcagtacaaccagagcaagaatctgattggaaactagcattccgtatatttggaaattttactgttgtatcctcactggttgcattcatttatgttttttcacacatcatccttgcaagccccagtataattcaaggtcttgagtttcctggcctggacctaccagattctgttggtgaagtcgtggtttgtggagttcttgttctgcaaggacagcgtgtcctaaatatgattgcacgattcatccaggctaagaggcagagaggaagtgatcatggagtcaaagcacaagggaatggttggttgctgactgtcgctctgattgatggtaccaatttagcagcaaccaaatcatctggttactctgatccatatgttgtatttacctgcaatggaaagacgaagactagttcaattaaatttcacactctggaacctcggtggaatgaaatttttgaatttgatgccatggaagatcctccatccgttatgaaaataaatgtctacgattttgatggaccatttgatgaagttgagtctcttggtcatgctgaagtaaatttcttgaaatctaatctatccgagctttccgacatttggattcctctcaagggtaagctggctcaagcatgtcagtcaaaattgcatttgagaattatcttgaataattcaaggggtactgaagtcatgaaggactacctagacaaaatggagaaagaggttggcaaaaagattgctgtaaggtctccacacacaaactcagcattccagaagatcttttctttgccaccagaagaatttctaatcaatgattttacctgtcatctaaagcgcaaaatgctcacacagggccgcctgtttttatctccaagaattattgggttctacactaatctttttggccacaaaacaaaattcttctttctttgggaagatatcgaggacatccaagtgatgcctgcaacactatattcaatgggaagtccatctctgcttattattcttcacaagggcagaggaatggatgcaaggcatggagcaaagcaacttgataatgaaggccgactcaagtttcatttccagtcttttgtatcgttcaatgtggcacataaaacaataatggcgctctggaaggcaaggtccttgacccctgaacaaaaagtacagctggtagaagaagaatcagaaatgaaagacctccagaataatgaaagtgattctttcttaggaatagaggatgcaaaaatgtcagaagtattttcatctacaaaaccttttgatgtatcaacactcatgagcatatttgagggtggtcctttggagcatcaagtgatggagaaaattggctgtatggagtactcagtttcaccatgggagtccgtcagagctgatgcttaccagaggcaaattcattacaagttcgacaagagattggcacgccatgaaggggaagtaatgagcacccaacagaaatcccctttgcctgataaaaatggatggcttgttgaagaagtgatgacgcttgaaggtattccagttggtgaatacttcaacctgcatatgcgataccaattggagcagatctcatccaagcccaaggcatgcaatgtccaagtgtctattgggatcgcatggttaaagagctgcaagaacagaaagaagattgctcaagaggtactatccagtgcatcttctcgcctcaagaagatgtttggcctactcgagaaggaattgttaccagccaagtag</cdnaseq>

Protein Sequence

<aaseq>MRLLVQVSEARNLPAIDGGGGLSDPYAKLQLGRQRGKTRVAKRT LSPTWDEEFAFRVVDLKDELVVVVVDEDRYFSDDFLGQVRVPLSAVLDADNRSLGTQW YQLLPKSKKSKIKDYGEIRLTISLSLNYPEETTTLAHCVSDDLASYSDKSTELQKGSS LPNIPIEIPTSVSGGDETEIIKEDRSNGVPSFVNRLYQFFSAKPKDAEASASAPPLTT GDGNSDILEETPSTSSELPDNQDYETGVTMSFDEQLKAFGSCHEGNEIPENLSGGVLI DQVYAVAPSDLNGLLFSPSSDFLQSLAEMQGTTGLEIQQWRLENDGEVLKRVVSYTKA PTALVKAVKATEDVSYLKADGDIYATLADVSTPDVPFGNSFRVEVLTCIMPGPELPDN EKSSRLVVSWRLNFIQSTMMKGMIENGAKQGLKDNYIQFSELLARNIRPVDSKDAAAT DKVLSSVQPEQESDWKLAFRIFGNFTVVSSLVAFIYVFSHIILASPSIIQGLEFPGLD LPDSVGEVVVCGVLVLQGQRVLNMIARFIQAKRQRGSDHGVKAQGNGWLLTVALIDGT NLAATKSSGYSDPYVVFTCNGKTKTSSIKFHTLEPRWNEIFEFDAMEDPPSVMKINVY DFDGPFDEVESLGHAEVNFLKSNLSELSDIWIPLKGKLAQACQSKLHLRIILNNSRGT EVMKDYLDKMEKEVGKKIAVRSPHTNSAFQKIFSLPPEEFLINDFTCHLKRKMLTQGR LFLSPRIIGFYTNLFGHKTKFFFLWEDIEDIQVMPATLYSMGSPSLLIILHKGRGMDA RHGAKQLDNEGRLKFHFQSFVSFNVAHKTIMALWKARSLTPEQKVQLVEEESEMKDLQ NNESDSFLGIEDAKMSEVFSSTKPFDVSTLMSIFEGGPLEHQVMEKIGCMEYSVSPWE SVRADAYQRQIHYKFDKRLARHEGEVMSTQQKSPLPDKNGWLVEEVMTLEGIPVGEYF NLHMRYQLEQISSKPKACNVQVSIGIAWLKSCKNRKKIAQEVLSSASSRLKKMFGLLE KELLPAK</aaseq>

Gene Sequence

<dnaseqindica>605..956#1928..3205#3560..3742#3834..4117#4207..4323#4990..5252#5421..5589#5702..5974#7336..7530#gtgttgagtcctcaaaacattttcattctcattttttcattttcatttttcagttcttcacctcctctcctcttcctcttcgccggcggctcaaatcaaagtcttccgtgcccgaagccgaccaccgcccatccgttgcttccacacaaaacctcacccaggctccccccctccaatcgctctctgattctgattggcctccgcaaacgcccgccctgcctgctgctgatgtttgtttttttctcctgattttcttttttctcattgattgggggttggtttctagtttatgccctcgtttcttgccatttcccgctgagttcgtggcgcctttaatctcgatggattgactgattgattgattgattgattgattggaggcggtgcgagcgggaaagagtggattgtttcctggacaagagcaagcgggaaagttcgttcttgatttctccgagttcaacgaccacttccatgtttccaacctgaaccacaagctgcagttaaaaaagataggataggaggagcaatctccggtttcttgattttttttttttttgaaccgcgcccaaatcgtgattcttggaagaagaggggaaggagggaaatgaggctgctggtgcaggtgagcgaggcacgcaacctgccggcgatcgacggtggcggcgggctgagcgacccgtacgcgaagctgcagctggggaggcagcgtggcaagaccagggtggccaagaggacgctgagcccgacctgggacgaggagttcgcgttccgggtggtggacctcaaggacgagctcgtggtggtggtcgtcgacgaggacaggtacttctccgacgacttcctcggccaggtcagggtgcccctctccgccgtgctcgacgccgacaaccgctcgctcgggacgcagtggtaccagctgctgcccaagagcaagaagtccaagatcaaggattacggtaaattcatggcacccccccccccccctaatgttatcttgagttcttgaatttgcccttgtttcaagatatgaaaaggtattatgctgctgttttgcaaattcatccagcttgtgctgttttggatggtttgcctcgtgatggtaatgtgttgcttttacctttgaagtggagctttgttactccctccgtttcgctttgactgttttcatagttaaactttgtttagtttgaattttcgatcaagtttatagaaaaacttgccaacatctaaaataccaaattagtttcattaaatctaacattgaatataatttgataatatgtttgtttttttttgttgaaaaatactactatgtttgactatgaaataaagtcgaagcgacttgtaatataaaacggagggagtacttatagagtgttggatgagtagctgtactagtttctcactttctttttccttattgttcttttttcttggcaatagtctcctaccatgtctttatttactattccatcttctcaaatagatgatgtttaatgtgtgcaatcaaacatcgaaatcttaaaccactcatataggcaaagatgttaagatttggtattcaaaaagaagccattagtatatttggtacgaaaacactttcatgtaggtatgtttccaataattttatacgcattggaaaccattgaaataattaatagcattattgacaaacaagaaattaagccatctacacaattccgtttttattggagttatggttgtgatgtactagtatggatatgttttcgcctggatgatatactagcactattgtttgctgttcaagcttttctatttgtttttattcatccaagtctccagtccttctctttccataacaaagcccacttttgtttgcctatatccaattttatttatgcatgcaagtaatttatatactgataacaggcaacaacttctgtaggagaaattcgtcttacaatatctctctctctaaattaccctgaagagacaacgacacttgcacattgcgtttcagatgacctcgcgtcatattctgacaaatcaactgaattacagaaaggatcttctttgccaaatattcctatagaaatacccacgtcagtatcagggggtgatgaaacagaaatcatcaaggaggatagatcaaatggtgtcccatcatttgtcaatcgtctgtatcaatttttctcagcgaaaccaaaagatgcagaagcttcagcttcagctccacctctcactacgggcgatggtaattcagatattcttgaagaaacaccatcaactagttcagaacttcctgataaccaggattatgaaactggtgtaactatgtcctttgatgaacaactaaaagcctttggatcttgccatgaagggaatgaaatacctgaaaacttgtcaggtggagttcttattgatcaagtttatgctgttgcacccagtgacttgaatggacttcttttctcaccaagttcagatttcttgcaatcactagcggagatgcaaggaactactggtcttgaaatccaacaatggagacttgaaaatgatggtgaggtcttgaagagggtagtaagctacacaaaagctcctactgcactagtcaaggctgtgaaagcaacagaggatgtgtcatatctgaaggcagatggagatatatatgcaactttagctgatgttagtactccagatgttccatttgggaattcttttagggtggaggttttaacatgcataatgccagggcctgaactacctgataatgaaaaatcctcacgtcttgtagtctcctggcgcttgaattttatccagagtacaatgatgaagggcatgatagaaaatggggctaaacaagggttgaaggataactacattcagttctctgaactcctggctcgaaatatcaggccagttgattcaaaagatgcagcagctactgataaagttttgtcttcagtacaaccagagcaagaatctgattggaaactagcattccgtatatttggaaattttactgttgtatcctcactggttgcattcatttatgttttttcacacatcatccttgcaagccccagtataattcaaggtcttgagtttcctggcctggacctaccagattctgttggtgaagtcgtggtttgtggagttcttgttctgcaaggacagcgtgtcctaaatatgattgcacgattcatccaggctaagaggcagagaggtagtgtccatttctccttttgctgctgctgttatttttccttggtggaaattgaaaatgaaagttcagtagataatcctacagtacatggcactcaacggcacatgttacatgtacttagtgttctatacaggtgcttgtataatctttccctgatatggaaaaatgttactgttgccttttgttttcctcaacaaaatcttcgcttattaattattattgtggagtctggacatactgttactttctgttttctttagaaaaaccttctattcttgttctggacatatatactcccgtgatttatgcacatatgaactaaactttgcttacatggtatttgggagtatataggaagtgatcatggagtcaaagcacaagggaatggttggttgctgactgtcgctctgattgatggtaccaatttagcagcaaccaaatcatctggttactctgatccatatgttgtatttacctgcaatggaaagacgaagactagttcaattaaatttcacactctggaacctcggtggaatggtaaaagtttggcttattatcttatgttataattgctgctatataaaattacaattcataattttgcaacatatcttctcaaaatttgcagaaatttttgaatttgatgccatggaagatcctccatccgttatgaaaataaatgtctacgattttgatggaccatttgatgaagttgagtctcttggtcatgctgaagtaaatttcttgaaatctaatctatccgagctttccgacatttggattcctctcaagggtaagctggctcaagcatgtcagtcaaaattgcatttgagaattatcttgaataattcaaggggtactgaagtcatgaaggactacctagacaaaatggagaaagaggttggcaaaaaggtaatgcacttatcttctctatttttgagtgaggtgaagtgtcatcctatcttggcctgcctcttttcttatgcaaatttaccatgcagattgctgtaaggtctccacacacaaactcagcattccagaagatcttttctttgccaccagaagaatttctaatcaatgattttacctgtcatctaaagcgcaaaatgctcacacaggtaaactgtcttttaattatgacacagagagctaacaaaggtgtccaacactcttgtattggtttatccttatttagttttcttctttattgtggggatggcttcatttgtttcataaaatttcactgtcctttgctgacagctgaaaaagtgaagtcagtactccctccgtcccacaaaaaaccaacctaggtatggatgggacatcacctaggactatgaatattttgtcctaggtggtgtcccatccccacctagataggttttttgtgggacggagagagtatcgtaaaaccaaacaatcagctgttggtactttttcaataataaatataaaagtctacagaaggtagtcacacttttcacccactattcggtactaagttgtaaaaaggaatgcattaaaaataattcagcttctgcatcccttttaaatttaaataattcaacttgtacccctatttaaacaatatattcaatttaatccatctcccattactgtttcagcctaatgatgataggtcaccaaagtgtacagtagcctttctgttacgagactggtgtattttgtcacatagccatattactgcacaaccaagttagacattaagatctttttttttgtctgtgaacttgcatggtagctgacgcttgtgtctgttgcagggccgcctgtttttatctccaagaattattgggttctacactaatctttttggccacaaaacaaaattcttctttctttgggaagatatcgaggacatccaagtgatgcctgcaacactatattcaatgggaagtccatctctgcttattattcttcacaagggcagaggaatggatgcaaggcatggagcaaagcaacttgataatgaaggccgactcaagtttcatttccagtcttttgtatcgttcaatgtggcacataagtaagttctgcttcttgggtgacgaacatgaacttgtcttgtcaagcacgtctgttcattacatgaaaaacttcttgcaatgaggcccgattttttatctatttactcacctattaagtactatttttggtaacttgtttttcaaatttccctttgcacggtttacagaacaataatggcgctctggaaggcaaggtccttgacccctgaacaaaaagtacagctggtagaagaagaatcagaaatgaaagacctccagaataatgaaagtgattctttcttaggaatagaggatgcaaaaatgtcagaagtattttcatctacaaaaccttttgatgtaagattcttattccatcctgagaattatctgcaatcaatctctatgctgcaaaaagaatgaaaaagaaaaacataagtttacattgtagccaacttgtatgtttcattaggtatcaacactcatgagcatatttgagggtggtcctttggagcatcaagtgatggagaaaattggctgtatggagtactcagtttcaccatgggagtccgtcagagctgatgcttaccagaggcaaattcattacaagttcgacaagagattggcacgccatgaaggggaagtaatgagcacccaacagaaatcccctttgcctgataaaaatggatggcttgttgaagaagtgatgacgcttgaaggtattccagttggtgaatacttcaacgtaagtgacaatttcatggcttatactatttcttttattatgtacatttcaatcctatgcccttaatttagtattgtagtcatgtaaacaagagagttgtgtgtctcctagagatctgtttgggtctcagaattatgaaaacgaggttacataaaaataggatttagtccgtactaaataaacttccaatatgggtgtcagtaactaaaaccaaattttgattaaactagtgagcagaacaagacaagttccctcttttgttgggtaaatatatagtggaaaccactaatccactatccacgtggtaaccatggaaaccagataaaaaaaatatttaaaaaaataaaaagaatatatatcacatagctaagatgatttcagacaaccatgcaaaatttcaagaaaaaatccgtctttgtttgtgagtagtgaagaaaaagacaaccaggaatagcatttcttcttcgccatttgttaacttcctatctcaaactaagtcgagtttgctcttgaaattttatatggctgtctaataccatcttctctatattttgtttttttagattttacataaaataatactgatagtttccaagtttccacctaaggtgtggtttccacaactgtacatagtttcccctattttggttcatctgactatctgagaagctatactgtcagctgaaacccagcgctacgccaataactactgcagtattgaccattcgtttgctccttgttggttttctgtggtatcttcaattgaactactctctccgttccatgttatgagtcgttttgactttttcctatgtcatttttttttaagtttgaccaagcttacataaaaatatagcagcattccagcacaaaacaaatatactctaaaaatatattcaagggtggacttaatgaaactaatttggtgttgtatatattgctatccttttcgataaagttgatcaaacttgaagaagtttgacttacacccaaaacgtcttataatatgaaatggagggagtactacagtaactgataaatgtcatcctggttgtggagaattgttcattgccatttcataatatcaaagaacacctttatttacacgtccaattactaatggtgactatggtaaagaggttcatccagattctggaaaaccaatacattaccatatacagaagatctcattaaacaaatatgcatttcacctgaaattagaaaagaaggcagtctcagatttattgaattggtctctactttcaagtgaaaaatcatctttttggtcatcttattacaactgaaagtgttactttccttctcacatgactgagcagcactccctcttaacttttttacagctgcatatgcgataccaattggagcagatctcatccaagcccaaggcatgcaatgtccaagtgtctattgggatcgcatggttaaagagctgcaagaacagaaagaagattgctcaagaggtactatccagtgcatcttctcgcctcaagaagatgtttggcctactcgagaaggaattgttaccagccaagtaggggccctttttcataccctgcgttttctggtgcacccatgtatagcccgaaatcgtcgtctggtgtctcttggttttgacaacatcttgttcctgatgctgagcaagaatcagtacataatgcgaaaggttctaacttcgcaggcaaggcagtgtaccataccctgatgaacatctccccatgcaagattcagactggagaactgacagcagagctaggaagttgttctagtcatgaaaacgttactgttcaaatgcagttcttgaacaagaggtttggtatcttgcctatactcttcaagatagatcattcgaaactttggtctgtcattgtagttatcagttgtcagtccctttagcaacagaaaacaatgcagcttccgtagccattctttttttagatttttactccagcaaagattacatgatctgttgttacggacaaaagaaatgggaaaatttaccagaaaaactgagccactgtttaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0297800, RefSeq:Os06g0297800