Difference between revisions of "Os06g0305200"
(Created page with "{{JaponicaGene|
GeneName = Os06g0305200|
Description = Non-repetitive/WGA-negative nucleoporin family protein|
Version = NM_001064003.1 GI:115467737 GeneID:4340842|
Length...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0305200| | GeneName = Os06g0305200| | ||
Revision as of 20:21, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0305200 |
|---|---|
| Description |
Non-repetitive/WGA-negative nucleoporin family protein |
| Version |
NM_001064003.1 GI:115467737 GeneID:4340842 |
| Length |
10378 bp |
| Definition |
Oryza sativa Japonica Group Os06g0305200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:11583409..11593786 |
| Sequence Coding Region |
11583708..11583869,11585847..11586016,11586194..11586320,11586976..11587238,11587320..11588952 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:11583409..11593786 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:11583409..11593786 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcttgggcggaggacgaggcgattggccccgacgtggcctccgcggggctccacgtctcggagcggatcggccgcgacgccgccgctcagcccgacctggaggaggccctcgaggcctcgcgctacgcctcccatccctactcctcgcatcccaaggagtggcctcctttggtggaagtagcagaaactaggcagttacctcctatgctggttgaaagatataatgccgctgctggtgaaggaacagctctttgtggaatattttctgaagtacaccgtgcctgggcaactgttgacaattcattttttatttggcgctttgataagtgggatgggcaatgtcaagagcataacgcggatgaacaagtgatttgtgctgttggccttgctagagcaaagcctggtgtttttgttgcagccattcagtaccttttagtattagcaactcctgttgagctgatacttgtcggagtttgctgttcagctagtggtgatggaactgatccgtatgcggagctctcattgcaacctttacctgagtacattatttctactgatggtgtcacaatgacatgcatcacttgtacagataagggtcaaattttcctatctgggcgtgatggccatatatatgagctgcaatatacaactggttcaggttggcgaaagcgctgccgtaaagtttgccttactactggtttaggcagccttctttccaggtgggttttgccaaatgcattcaagttctcggctgttgatcctattgttgatatggttattgatgaggagagaaatacaatttatgcgcgcacagaaggcatgaagatgcagctatttgatttaggagctactggcgatggtcctctgagaaagatcactgaagaaaagaatcttgttgatccacgagatgcaccttatggcagtcggaggcctaatgcacaaagagctgcacgatccccaaaaccatcaattgtctgcattgcacctttgtcagctatggaatcaaaatggcttcatgctgttgctgttttatcagatggcaagagactgttcctttctacatcaggtgggagtagttcagttggacttagcactggtttgcagaggccaagctgtctaaaaattgttgctaccaggccttccccacctctaggggttggtggtggtctcacatttggtgctgtttcagctgctggcagagctcaacctgaggatcttgctttaaaagtggagtccgctttctattctgccggtgctcttataatgtcagattcatctgctacagctatgtcctcccttctcgctgtgcagaaagattcagctgcccaattatcccttcccagtacttttgggacagcatctagaagctcgagggctctgcgagaaacagtctctgctttgcctgttgaaggtcggatgctttgtgcctctgatgtcttcccgcttccagatgctgctttcatcatgcagtcattatatgcagacgtggaatgctttgcatcttttggaaaaccttctgagaagtcatccattaaactgtgggctaaaggagatcttcctacccagcatatcttacctcggaggaggattgttatattcaatactatgggtttgatggaggtagtttttaacagacctgttgatatcctaagaaaattgtttgatgggaacactttgagatctcagttagaagaattctttagccgctttggtgctggagaggctgcagcaatgtgcttaatgctagctgctaagctgctttatgctgaagatagcctgataagcaatgcagtttctgagaaagctgctgaagcatttgaggaccctggacttgtcggaatgcctcaaattgatggcagtactgccttgtctaacactcgaactcaggctggaggctttagtatgggacaagttgttcaagaagcacaacctatattttctggtgcatatgaagggctttgcttgtgctcttctagactactgtatcctatctgggaacttccaattatggtggttcgaggactggtaggttccaatgatcgtggtgatggtgtggttgtttgcaggctttctactggggccatgaaggttcttgagagtaagatccgttcattggaaacatttttgaggtcaagaagaaacaaaagaagaggactttatggttatgttgctggtctaggagattctggttccatactgtacaaagcagggcctatcattgggtctggtggtcatagcagtgggaagagtccatacagctctcgcattagagacgctgatccaacagatcagtctgcatcaaataaaaagcaaaggctgccttacacatcagccgaactagctgcgatggaggtgagggcaattgagtgccttaggcggttgcttcgaagatctggtgaagcactctttctgcttcaacttatttgccagcataatgttgctcgcttggttcagacactaggtaatgatttgcgcaagaaactagttcagttaacatttcatcagttggtatgttctgaggatggtgaccagcttgccatgcgccttatttctgcactcatggagtactatatcggtccagagggcaggggaactgttgatgagatcagcactaaattgagagagggttgtcctagttacttcaatgagtcagattataaatattacttagcagtggaatgccttgagagagcatctatgacaaacaatcatgacgagaaagacatccttgctagagatgccttcaatcttttaactaaaattcctgactctgctgacttgagtgctatatgcaagagatttgagaacctaaggttctacgaggcagtagtccgtttgcctttacagaaagctcaagcacttgattccaatgctgatgttattaatgggcaaatcgacgcaaggcatcatgatactataactgcacagcgtgaacagtgctataaaatagttatgaatgctttacgtaccctcaagggtgttggacagagtggcacacaaggtgcagacaagtcatctgcttcagttactgcacttgatccagcttctcgagggaagtatattaaacagattattcaattaagtgtccagtggccagacacagtgtttcatgagcatctgtataggactcttattgagcttggtttggaaaatgaacttttggaatatggaggttctgatctggttgcttttctccagagcgctggtcgtaagcatcatgaagaggttcaaggactttctgtggttgcatcaaaagcctctaaactgactgatttggatgcacctatttcaactagtcaaaccaagtatcttgagctgctagccaggtattatgttctcaagggggagcatattgctgctgctagaatgttgttgatattggcagaaagacagtgctccagtgcggaagaagctccaactcttgaccagaggtatcaatatctgagcagtgcagcgattcaggccaaaagtgcaggcattactgcagattcttcgaggaatcctattgatagcagcacgatagatctacttgaaggcaaacttgcagttcttcggttccaaatgcaaatcaagcaagaactagagttcatggcttcacagcttgaaaatctgtcaggcagttctgaatcaccaaatgatccctttcctcgtgataacattctagctgatgcggatactgctagatttgccatggacaaggctaaagagctttcactgaatctaaagagtattactcaactttacaacgattatgctgttccatttaatctttgggaggtttgcctggaaatgctcaactttgcaaattattctggagatgctgacagtaaaattgttcgagaaatttgggccaggcttcttgaccaggcacttacaagaggtggtgttgcagaagcatgttctgtggtgagaagagtaggttcaaaacttgatcctgcagatggcgcttgtttaccattggatataatatgccttcatctcgagaaggctgcattggatagattaagctcaggagaagaattagttggtgacgaggatgttgcaagagcccttctcggagcctgtaaaggtctacctgaacctgtgcttgccgtgtatgatcaactgttatcaaatggcgctattgttccctccctaaacctgaagctgcggcttctgagatcagttcttgcaatccttcgtgaatggggcatgactgtcattgcacataaactaggcaccacaactgctggggcttcattctttcttgatggaacattttcgctgaatcaaacatggtctttaaatcaaggcgttcgagataaaataagtagtttggcaaaccggtatatggctgaggtgaggcggttaagccttccaaagaaccaaacagagaatgtctatcgaggtttccaagagctagaggagaaattattaactaattag</cdnaseq> |
| Protein Sequence |
<aaseq>MAWAEDEAIGPDVASAGLHVSERIGRDAAAQPDLEEALEASRYA SHPYSSHPKEWPPLVEVAETRQLPPMLVERYNAAAGEGTALCGIFSEVHRAWATVDNS FFIWRFDKWDGQCQEHNADEQVICAVGLARAKPGVFVAAIQYLLVLATPVELILVGVC CSASGDGTDPYAELSLQPLPEYIISTDGVTMTCITCTDKGQIFLSGRDGHIYELQYTT GSGWRKRCRKVCLTTGLGSLLSRWVLPNAFKFSAVDPIVDMVIDEERNTIYARTEGMK MQLFDLGATGDGPLRKITEEKNLVDPRDAPYGSRRPNAQRAARSPKPSIVCIAPLSAM ESKWLHAVAVLSDGKRLFLSTSGGSSSVGLSTGLQRPSCLKIVATRPSPPLGVGGGLT FGAVSAAGRAQPEDLALKVESAFYSAGALIMSDSSATAMSSLLAVQKDSAAQLSLPST FGTASRSSRALRETVSALPVEGRMLCASDVFPLPDAAFIMQSLYADVECFASFGKPSE KSSIKLWAKGDLPTQHILPRRRIVIFNTMGLMEVVFNRPVDILRKLFDGNTLRSQLEE FFSRFGAGEAAAMCLMLAAKLLYAEDSLISNAVSEKAAEAFEDPGLVGMPQIDGSTAL SNTRTQAGGFSMGQVVQEAQPIFSGAYEGLCLCSSRLLYPIWELPIMVVRGLVGSNDR GDGVVVCRLSTGAMKVLESKIRSLETFLRSRRNKRRGLYGYVAGLGDSGSILYKAGPI IGSGGHSSGKSPYSSRIRDADPTDQSASNKKQRLPYTSAELAAMEVRAIECLRRLLRR SGEALFLLQLICQHNVARLVQTLGNDLRKKLVQLTFHQLVCSEDGDQLAMRLISALME YYIGPEGRGTVDEISTKLREGCPSYFNESDYKYYLAVECLERASMTNNHDEKDILARD AFNLLTKIPDSADLSAICKRFENLRFYEAVVRLPLQKAQALDSNADVINGQIDARHHD TITAQREQCYKIVMNALRTLKGVGQSGTQGADKSSASVTALDPASRGKYIKQIIQLSV QWPDTVFHEHLYRTLIELGLENELLEYGGSDLVAFLQSAGRKHHEEVQGLSVVASKAS KLTDLDAPISTSQTKYLELLARYYVLKGEHIAAARMLLILAERQCSSAEEAPTLDQRY QYLSSAAIQAKSAGITADSSRNPIDSSTIDLLEGKLAVLRFQMQIKQELEFMASQLEN LSGSSESPNDPFPRDNILADADTARFAMDKAKELSLNLKSITQLYNDYAVPFNLWEVC LEMLNFANYSGDADSKIVREIWARLLDQALTRGGVAEACSVVRRVGSKLDPADGACLP LDIICLHLEKAALDRLSSGEELVGDEDVARALLGACKGLPEPVLAVYDQLLSNGAIVP SLNLKLRLLRSVLAILREWGMTVIAHKLGTTTAGASFFLDGTFSLNQTWSLNQGVRDK ISSLANRYMAEVRRLSLPKNQTENVYRGFQELEEKLLTN</aaseq> |
| Gene Sequence |
<dnaseqindica>300..461#2439..2608#2786..2912#3568..3830#3912..5544#5616..5828#5962..6209#6313..6724#7424..7629#7749..8094#9048..9266#9376..9704#10177..10276#cccacccaaaccctagccccgcgccgctccatctcccaccggcgcgcgccgtcgccgccgccgccgcctccgcctccgcctcgcgccgtcgccgccacttccgccttcgcctccacctccgcctcgtttccccaacgcgccacggcaaaagcgggggaacccgcgctggaaaacttgaaaaaccccaacctaaccccctcccaccccgccattcctcacatttgcacccccatcgctgcgctctaggtttttttttttcctccgcgccttctccccgcaagaggcgtattgctccggcgatggcttgggcggaggacgaggcgattggccccgacgtggcctccgcggggctccacgtctcggagcggatcggccgcgacgccgccgctcagcccgacctggaggaggccctcgaggcctcgcgctacgcctcccatccctactcctcgcatcccaaggaggtgagctccccggaaccaatcgcgtgctctgtactcggggctgtgcgcggctgagccgttgatctgcagaggctctcgttgtcggggagaaattattcttggtagatttgaggtttgcagcggagttggggagcggtgcgccaagcagctgttgttttgggcgattcgctggaatttttaactagttagttatttgtttcctgagagaaaggggaggggaagctgcgaagtggggtgttgatgagaacgagaaccctgaaatgggccgttatgtttagttaagtagaacgttagggtgaatttttctgtagctactgtggtgcatcatttgaaaattctggtttatcttctgtgtcataatttgagatcccgggaggctggaggcggggacaaaaacagagctcaccaatgtatttatgggccaatttaattttgttaaattttaggatcctgctaaccctggattacgtataataaactgtggaataaactctccagttatatttgaaatccggggaaaactctaggggaagttatcttttgatatacgttaaatagtaacactttttttgtagcatcattaatcactctgtgagcttattttcctgtctcccttaaattccttctttctatgtgaacatccatagtttgattgtagtttggggatcccatacattccaggtaggcagtgaaattttatgaaactaggaaccaacttatatatccttctttcaacagatgggacaaaccgacaaagggtatagagttcacctctcaaactgttaaaatatttggaacctatttgaggtgttttgttttattactttccattttttctattagatatgtgaaacaattcctttatgaaaaaaaatcaactgaagtgcagggatccattgtattggttgcaaatcaacatttcttgtgatactggatacttaggacatgactacgacgagatgtaagctagattgtcttaaccagcggcctctcttgttgctactagtatacccaacagtgcatgtttttttttcttcttatagaattttctcttaaatcactcatccgatttatgatccgattacaccgttgtgttcgtaacaattaaatctttacagcaagatctcacatgattatatttttttatgaaaaatacaatttacttttataatatatctaaattacttttatatttcattaaattacttcttagacatataaaagtaaattcaataaatggtaaaagtaatttacatatattatagaagtaacttaaaacaaaaaaaaaagtaacttgtcacgacatcaaaagtaaatctattatagaggtaaaaacctaagtttatctagaaattaaatctaatcaacatattatagaactaacgataaagtaaatgtctaaaaagtaacttaatcaaatctaaaagtaatttatatgtatgataaaagtaacttacatatatgataaaagtaagttacaacataaatatttttttattataatataatcatgtaagatcttgttataaagatttaattacaacgaacacaatggtgtaatcagattgtatatcgaataaatattttaagagaaaaatctataagaagaaaaaaagagatacactttgtgcagtagtaaacaactagaccatctctcacgtaggtctctcacgtaggtgtactagttgcaagtgaaccttctctcacgggtgtatcgctctttaatactaaaccgagagcattctcggtttagattttaccggatacttatgcttgatgttaatgaagaataaatagacacctttgtgctctcctgtaaaagaggaaattacatagatccgactattcttttctacctcctgtgtattttttaagttatacgctgaagttattatgaaaatgttcctcaatttttttggaaatgcatcttttattcttttgtgcttcacacactcactctgcccctttttatttcagtggcctcctttggtggaagtagcagaaactaggcagttacctcctatgctggttgaaagatataatgccgctgctggtgaaggaacagctctttgtggaatattttctgaagtacaccgtgcctgggcaactgttgacaattcattttttatttggcgctttgataagtggtaattgacttgcttctctttatattttcccgatacattgaacttagttgaaaacaattttttatggatcaaggtgattcttaccttttgtttcgaaattttcatgttgtccttagcatgccgtgctaaccatctaatgtatgaacatatggtttgatattatgatgtaccactcagggatgggcaatgtcaagagcataacgcggatgaacaagtgatttgtgctgttggccttgctagagcaaagcctggtgtttttgttgcagccattcagtaccttttagtattagcaactcctgttgaggtaattatgcccctttgaatcactacgttccgtgctaaatttgagcaaacctatgatgccttgcggacacaccattagttctattttgattaagaatctaaggttaatgttgatctaaaagaatatcacataattagctcataggtgtttttttttctgcaaggacatttagtaaatgctacaaatagaacaacagaagtgcaaggacatttagcgatgcattatctcttggaagctcatatacattacaaaaggtcttctgctgaataaagcttaactagtgtagtgcccatgcattgccatgtatctcaaataaataatacacttattaagatcaatcaagcaagcgcttttgcatatgagatgcaatctttcacaaaagatcctacaaaaatgacgcgcacaggtctgtgtagagtcatccatagtatcaaaggaatgggacaatcactgactccttttataaaaaaaataaagatacaaaatatctgtctcagttactatcaagcttcctctttgctaatctttctctttggtgattgaaatttaccatgtgaactagccaatcttccaagcaacaattttactaccttttcttctatttatgatctttatttccaagccgtcatatactcatctgcaactgttgtgccagctgatacttgtcggagtttgctgttcagctagtggtgatggaactgatccgtatgcggagctctcattgcaacctttacctgagtacattatttctactgatggtgtcacaatgacatgcatcacttgtacagataagggtcaaattttcctatctgggcgtgatggccatatatatgagctgcaatatacaactggttcaggttggcgaaagcgctgccgtaaagtttgccttactactggtttaggcagccttctttccaggtactaaagctgtaggacaagaaatgtgacgctttgctttgtttcttaacagtctcccaattattcaaacatgcttttcaggtgggttttgccaaatgcattcaagttctcggctgttgatcctattgttgatatggttattgatgaggagagaaatacaatttatgcgcgcacagaaggcatgaagatgcagctatttgatttaggagctactggcgatggtcctctgagaaagatcactgaagaaaagaatcttgttgatccacgagatgcaccttatggcagtcggaggcctaatgcacaaagagctgcacgatccccaaaaccatcaattgtctgcattgcacctttgtcagctatggaatcaaaatggcttcatgctgttgctgttttatcagatggcaagagactgttcctttctacatcaggtgggagtagttcagttggacttagcactggtttgcagaggccaagctgtctaaaaattgttgctaccaggccttccccacctctaggggttggtggtggtctcacatttggtgctgtttcagctgctggcagagctcaacctgaggatcttgctttaaaagtggagtccgctttctattctgccggtgctcttataatgtcagattcatctgctacagctatgtcctcccttctcgctgtgcagaaagattcagctgcccaattatcccttcccagtacttttgggacagcatctagaagctcgagggctctgcgagaaacagtctctgctttgcctgttgaaggtcggatgctttgtgcctctgatgtcttcccgcttccagatgctgctttcatcatgcagtcattatatgcagacgtggaatgctttgcatcttttggaaaaccttctgagaagtcatccattaaactgtgggctaaaggagatcttcctacccagcatatcttacctcggaggaggattgttatattcaatactatgggtttgatggaggtagtttttaacagacctgttgatatcctaa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ccattggccactacctgatgtgtggaatgctagccggtaacaaccatgcatcatgaaatcctgaactgagtcatcacaatttattttgacaaccaagatttgaattatttatcgttaaatttcaattttatctttagcattacatttttttggttattcaacattgccatataaaactataaacccctgatccctgttagcctttaagtcaaaatactcctgctcctttgtactactgctatctcaacatattttcttataaatatcatgtaaccactttacagttagagctgattattttccttttactttatgttgtatgtgcaacttcaggtatatggctgaggtgaggcggttaagccttccaaagaaccaaacagagaatgtctatcgaggtttccaagagctagaggagaaattattaactaattagacatttcaatttgtattctcggcactgtaaaacatgggttcgtgcatttgttgtacccaagtagagagataaagctaagccatcctggttcaattggacatg</dnaseqindica> 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