Difference between revisions of "Os06g0346300"

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(Created page with "{{JaponicaGene| GeneName = Os06g0346300| Description = Acyl-CoA dehydrogenase family protein| Version = NM_001064115.1 GI:115467961 GeneID:4340972| Length = 5128 bp| Defi...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0346300|
 
GeneName = Os06g0346300|

Revision as of 20:22, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0346300

Description

Acyl-CoA dehydrogenase family protein

Version

NM_001064115.1 GI:115467961 GeneID:4340972

Length

5128 bp

Definition

Oryza sativa Japonica Group Os06g0346300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13960263..13965390

Sequence Coding Region

13960263..13960275,13960789..13960862,13960946..13961005,13962765..13962874,13963010..13963169
,13963422..13963564,13963665..13963809,13963931..13964023,13965274..13965390

Expression

GEO Profiles:Os06g0346300

Genome Context

<gbrowseImage1> name=NC_008399:13960263..13965390 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13960263..13965390 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttagcattgcacaactcgggtcagaagcccagaaggagaagtatttgcgaccattgagcaaaatgcagaaagtttgcgtatatgccttgtcagagccgaaccatggtagtgacgcgagctctcttaacaccacagctagaaaggttcctggagggtggatactcaatggccagaagcgatggccagcaaacagcagttttgcagatatcttcgtcgttcttgcctgcaataccagcaccaatcagattaacggattcattgtgaatggaggcgcccccgggcttaagatcagcaagatcgacaacaagatgtcgctgagggtcgtccagaactgcgacatcctgctggaggacgtcttcgtccctgatgatgaccgtcttcctggcgccaactctttccaagacctagtgaagatatatagtatatctccacacaccattggtgatacagatttgacagactatgttgcatacattcaggccctctctttctctcgcgtcatcgtcgcctggatcagtatcggcattgcggcaggggtgtacgacgcatgccttcggtatctgggagagaggaagcagtttggggcgccattggcggcgttccagctaaaccaggagaagctcatgtggctcctcggctggcgtctctacgagctgcatgactccggcaggatgaccaccggccaggccagcttagggaaggcatggatcacaaagaaggcgcgggagactgtggccttgggcagggagttgctcggtggcaacggcatcgtcaccgacttccacgttggcaaggcgttctgcgacatggagtccttatacacgtacgagggcagctatgaagtcaatgcactcatcgttgctagagacatcactggcatcgccagcatcaggccggctagccggctctag</cdnaseq>

Protein Sequence

<aaseq>MVSIAQLGSEAQKEKYLRPLSKMQKVCVYALSEPNHGSDASSLN TTARKVPGGWILNGQKRWPANSSFADIFVVLACNTSTNQINGFIVNGGAPGLKISKID NKMSLRVVQNCDILLEDVFVPDDDRLPGANSFQDLVKIYSISPHTIGDTDLTDYVAYI QALSFSRVIVAWISIGIAAGVYDACLRYLGERKQFGAPLAAFQLNQEKLMWLLGWRLY ELHDSGRMTTGQASLGKAWITKKARETVALGRELLGGNGIVTDFHVGKAFCDMESLYT YEGSYEVNALIVARDITGIASIRPASRL</aaseq>

Gene Sequence

<dnaseqindica>1..13#527..600#684..743#2503..2612#2748..2907#3160..3302#3403..3547#3669..3761#5012..5128#atggttagcattggtatgtacatcatttggaagtcatgtgaacatggactaatcgagcagatatcacacacagcattggtatctagtttacagtgttgttatatatatatatatatatatatatatatatatatatatatatatatatatatatatattggggggggggtggaaactagaatattctctgtgttatattatgagaaaacatgaccaaaatagctaggttcatcacaaatgaagctccaaataaaaaccagagtggaatatatggaatggtacaactagggataacaagagatctaattaatgttttcattataatcattattttgatatgttttaatttactctgtatatataatacaattagagctaagtcgtaggacaaatacaacatttaggtggtactattgtgacttaactgtacaattctctacatattgcgaggtagctagagtgataatgctaacatatatatgaattcatcgatatatgtgcctttaatttacatgtggtgaaacagcacaactcgggtcagaagcccagaaggagaagtatttgcgaccattgagcaaaatgcagaaagtttgcgtatatgtaaggaaaaaaaccctagctcttggctattgataaagtttggtatatcatatttttcaattaatattgtgtgttaattccaggccttgtcagagccgaaccatggtagtgacgcgagctctcttaacaccacagctagaaaggtactcctatatctgttatcttgatttgtacaacctgcactattcatggtatattgaaagttcgaaactttattattgttaacggttaagaacaactatacgtatgtgtagtgtttctgaagccgcagatatgtgcaaaaacatatattgccggtcgtagtatagatgaagtcgtatgaatcaaagagatcttcatataattaacagagatatatagtccccaaatacatatagtgtttcaaatattaagtattactagtcgctaacccatgtcttgtgtgggttatttttattaactttgtaacaaataaaatttaataatacttcaattatgctggttatttttaagtaattcaaatggctcgtaggaaagatatgaagagttcccctcaattacaacgtgccggttattaatttcgaatttcatagttatgttaataatatactaaatttatttcattttttcaaaataaagctaaatagtttatgatgttttcagtggcatgttttaattaaacaggcaggaactccgaattacgatcaatagtcatatattaataagtattaaaatttcaattatttgtttaatacgttggttattttttcaattaatagtatcaaatgatttggaaaaattacatacattcagtctttgaaaagtctgtgcaacatgctgaatataagctcctcccccaagttcaatatgtgtcgcttgcaacttgcctgcgttggcacaagactagatcaataattttgctatgacttgcactcagattgagggactatatatctagaattcaatcgcctgaaatcattggaaggtttagtcacctgttgtattcgttggatatgcaatcaacggtggtatgtaggtcacgttttcttgttaaaaagaattactcggcagttgtgaacatgcaaattatcggccagctagcggatccaaaaggttcttttgtttgttattcacattcattggctttccgaactacgcaagtctctcacgtgggttgatgaaaaaacatccctacaagctaatagacataatattttctcaaccaaaaaaggtaaacaaccaatgtaatgcacgcttcaataaatattaaatatactctgtaatttgaatgtaacataatatttatttatcttgggataaaaaaaatctttttacctacaccctcctaaatcattgcagttggtttattacaaaattgcacagactaataaactgcaacatataaatatcgattggaatttgacaaaagtaataggatccgaacaaaaatttacatcgatttttcttaaaagctaaccagagggatagtttaaggatgattcaattcgtttcaacatgactaccaatcagttgaagaaataatatcagaacatgacatttctataacaaaattagagaaaaataagtccattctatagatcaaacttaaaatggtttcttccattttacttaaaattgtttcttccatttacttagctctattaagtaaagggaaaatttactaagtccatggtttcttgatctatagattacaataatgataatactacccatctaaacaacggctagatctaattaacgtgagatatactctctctctttctatttgtatatgctgtcttatataaatggaagaatggagtatctaattagtatgggtactggtactgattacctgtttctcttcagactacatatttcagtgattgagttccttgctctattgtaattaatttggagtaggttcctggagggtggatactcaatggccagaagcgatggccagcaaacagcagttttgcagatatcttcgtcgttcttgcctgcaataccagcaccaatcagattaacgggtaatcaaaagccatatatctacacactacattagctggtcgtcatactatggaaaaatatgtcgatactgtaaaatggtttacaatacatttggattattggttttacattcatttgcgtggaacgtactgcagattcattgtgaatggaggcgcccccgggcttaagatcagcaagatcgacaacaagatgtcgctgagggtcgtccagaactgcgacatcctgctggaggacgtcttcgtccctgatgatgaccgtcttcctggcgccaactctttccaagacctagtgaaggtaaaaactacaaacatacctagctccgactcaaaatataaggattttagagtctttttttgcggattattggaatagttaaaattaattaggtacagttatgttcgacgagttgtagaagtaggtggaaaaataagctatattttagctaggacaaaatccaaatgcaagaaatgactatgtggacaaaatttgtacactaaagtatatatattttggggtgaatggtgtactcgatcacttttgcttcagatatatagtatatctccacacaccattggtgatacagatttgacagactatgttgcatacattcaggccctctctttctctcgcgtcatcgtcgcctggatcagtatcggcattgcggcaggggtgtacgacgcatgccttcggtaaatacaatgttacctaagctaccacagcttgcagcttcatttgatgcgagatcgaccctctgacctacacacattcgcaccgctcatgtatatgtaggtatctgggagagaggaagcagtttggggcgccattggcggcgttccagctaaaccaggagaagctcatgtggctcctcggctggcgtctctacgagctgcatgactccggcaggatgaccaccggccaggccagcttagggaaggtacgtagtactagtacgtttgaacacttgctcgatcttctgttcgccaaccgtatcacggctgattatttgagataaaccgaagcgatagcattgtggcctgactcaattgttgttataggcatggatcacaaagaaggcgcgggagactgtggccttgggcagggagttgctcggtggcaacggcatcgtcaccgacttccacgttggcaaggtcctgaattaacggttttgctatatttgtgtcgccacaaaatctcatcgattacagtcgatttttcagccctctaatttgctttagattagcgctggatattatgatttgcgtatgcgttgtttgagatctgcgcccgactacctgcaatctatcattaatgtattactgatccagagcaaacacaaagtaacgtgtttaactgatcgatgtattactgcccaaggtcctatcattaacgtgttcaactgagcaaacaggcaactttattgctgtaattatatatttatacaaatttacacagcagttacaccccacttacatatgtaattttgaacttacatatgtaattttgagacttacattgtaaatacactaaaattacatatgtaatttagtgacttacaatgtaaatacatgctgactatattttggtgaaaaatatgacgtcataaatatagttactccctgaattaattaccctctcagtcaatgatttgttaatttacctcgttctagtgttcatattgcaatgcataggatgttcttttatggaaatagtactactacagaaataataaccatgccttcaattatttggagcatattatctcataagtagatacatataagttcagccgatgtcaaatttttgtgtgtatttgtcttctctatttgcacaatatatatgaacctgctgaatataaaacttacaggttgtttaaatgtatttcaacattttagttcgcttcatttttttacgttctgcattaacatgccacgtcaaactaatgaagatataagtctttagatttaatttatagtagtaaggatgacaggaagcacactattcttttagtaaaatacacttcttgtaattatacatatcaggttgtgtcatctaacaatacagaattaggtttgggaacatgttaaattatttcatcttgctaacttcaaaacaacgtacatgccccttcaagtgcgtgcgttgctgacatttcacctagagggttaagtggtagtttcacgtcgtacaacatcagaatacttgatcctaaaatataagggactcaaaattccttatattttagatagacgctgaatttgggtaattagatcagtatttttaaagtttagaaactagataatatagctaacaagtttagtgaccaccgacgtattttatccaaaattcttttttattatgataaattcatatatgtacgtacgtacttcgattcatgcaggcgttctgcgacatggagtccttatacacgtacgagggcagctatgaagtcaatgcactcatcgttgctagagacatcactggcatcgccagcatcaggccggctagccggctctag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0346300, RefSeq:Os06g0346300