Difference between revisions of "Os06g0489500"
(Created page with "{{JaponicaGene|
GeneName = Os06g0489500|
Description = CMP/dCMP deaminase, zinc-binding domain containing protein|
Version = NM_001064208.1 GI:115468147 GeneID:4341078|
Le...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0489500| | GeneName = Os06g0489500| | ||
Revision as of 20:23, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0489500 |
|---|---|
| Description |
CMP/dCMP deaminase, zinc-binding domain containing protein |
| Version |
NM_001064208.1 GI:115468147 GeneID:4341078 |
| Length |
6590 bp |
| Definition |
Oryza sativa Japonica Group Os06g0489500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:17729006..17735595 |
| Sequence Coding Region |
17729075..17733360,17733446..17733533,17733970..17734097,17735155..17735425 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:17729006..17735595 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:17729006..17735595 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtacagctcatactccgccgtcgccctcgcgctgagggccgccaagccgtcctcctgcgcccactccacttaccaccaccaccaccaccaccaccaccacggcgacggcggcgactgccaccagcaggagctgctgctcccgctgaaccctcgcgccgccgcggctccccgcttcatgctcgacgggtacctcctccgccactcggctcacttcctcctcctctccgctcggctccgccctcctcctcctcctccccgctgctgccaccgccgccgccgagtagccgcccgctgctgctgctgcggcggcggcggctccgttgctgggcacgtctcttggcgactggatccgccgcgggtgtgccgctgcagcgggcacggcgctgggaggtcgtcggatcttggagcggtttaccggcggcgacttgagtgccgctgcggcggcggtggtgggaggttggatctcggggcgggctgcgggccgcggcgggatgcgccgaggctggtggggagggcggtgaggcaggaggtgtgggagtacgagggtggcgagtggccgcacacgagctgttcgatggaatgccacacggactggggcgatgaagaggaagactgcggaattgctcagtgggaggcgccgccgaggtttcgtttaagtagaaggagaagtgaagaggatgagggtgacagatgtagggattgtcatcggaggaaggatgcggagagcgattactatgatgaagacgagtacagtggccggcaaagggagaggaggaatatgaatgaaagacatggtaggtttacagattctaaccagaggagaagggaccagagggactaccatgatgacgatgattatcttgaattcaggcgatggaaggagaggagggaaaggagagactctgaatttgatgatgctgttgcaaggagaggaattgaagatagaagatacagcgaggatgacaggaaatacgatcggagaagagaaaggaaggattttggatatgagggtgcagttgatgtcaggagaggagctagtaggtacactgataataaccaaagatctgattggagaacagaggatagggattatgaagttgacgtgaggagagaaggaaagcaccgtagaaatgatgatcaaagatatgttacacgacaccagcagagaactgatggtacagaggaagatgtttcactattggagtcgtatcgttggcatgatgaagaatatgattacgatgatcgagacattgctgagaggaggtactactccgggagaacccagaaatctgcaagagcatctgcattgcatgaggatgaatctaacagggcttcgagctcaaggaacatagttgatacaagggttgcaagaaacaaggagaattcagcctcaagggtccggtggcatgataatgtagacaaacgagctgagcagacatctgaagagagaaaccaacgatattcttcctcggtggttcaatcttttgatgagaagaaacatgaccatgacgatgcacagcttatcagtgtaagggattctaggataggaacacgagatgtcagggttataactgaggatgatgcaaatttggcctctagttcaaagaacactatgatttcaaagcaccacaacactgtagatcagaaatcaacaacacggaaggatgactcaaggaatagatcacagaaaataatggagctgtcagaagtcagaggtaccaacactgaacatgactcaagaacacaaagttatcaccaggaagatagaagaaggtacattgaaaatagggcatcttctcttcaaagttctgtaaagacgactagtgacactagaacacaagttgatcagcatgatgaagtggatcagcaggtggttgcactaactgactcaaggagaaggtctgaaaaactcacagatataaaaatggatagtacttctaatgttagcaggacctctctcaaacagagaaattctgatgaagtgaatcagatggatattgatgacagatctaattccgttcacaatataactcatattacaagagacaaaaagagatatgtaaaccagcaggtaatacatgaaacggacatagatgtgcagaatgtcacacatgttgatgtttccaaagttcgtgcgagtgatatttctgtctcaaggaattcacaaaaggcttctgaaactagatctgatatggcaaatagccagttagaacagatccatgctagtaatagttccatggttaggggtccacaaagttatctggaggctgcactgcacaaccgggtatactcgacttcagctaccgatattgttaacacgacagcggagaagcatggacaagtcgaagctagtaccaacaatgctgctatagcaagtacttctgaaagtcatatccaagcaagaatagaagattcagctgtaaatactattggcagtgtgcaagagcagattgatcttactagaatctgtgctagtgactccacagttgttagcagttcccatggtcttgatactagaagcggtcaagttagcagaacttcagctacaaatcttgttgacaggacaagggagacccgagataagagcgatcagcaaattacacaagcttcaaatatagacagaaatgaccacgtaacatccaaattttatgaatcctctcaggactctagacaaagtctagcaagattgaaagatgctgggagattgatggaacacaacgtgggtttgaactggcagcaggaagagtcaagaagagtttctaatgacatggatattgctactttggaaatgcagagcactgaagacggatcatctatggttcctgttgacgaggagaaaagaccaatgataactggaagcagtgaacaagaagtaaggagtgaaactactgctggaagcagtataccaagtggttcaagtgcaagacagcctgtgaatgaaagcttgttagaatcagctgctcgattagagaaatcatctacatttcatgtcgggcaatttgttggtgaggtccgcaaaggagtgtcagatgcggatactactttaacaaggaaaaatgataagtccataatggaaggtatagcaagatcttcatctagatctagaatggggggaccatcagatgagatgtgggatgtccaaagtgctacttctcaagagacctttaagacggctgataaggaggaaggctcatcagttgatggaggtactacttcgacttctctgacacccaagaatgaaactgctcttgctagaaaagttcacaaatcactctgggcctatgttgcagatatagtccgtcttggttggattcaacgtggtgaatctcttgattctaacagcaatagatcagttaagaaaagttcatcaagtaattctcagaatactgaaggctggatttctagccaggaacgcgataatgaaggcatacagaagaaaactgaaagttctaaaccaaaagatcatctgatgaagtcacacactggagaatcactaaagaaagaaagcttgcctactggttcacaagatctcctaatatcagaatctggtaacgtacctcagataaatacatctaaaggagattttatatccagaacttctaaagaagacgcacacatgacaggagaaaaagcaaaacaatcgaaagtcgctgcatcaccaaaacaaaatactgttggaggcttttctgaggacagcacgccaacattggttgacgttgcaaaaaaacattttcctgaacatgaagcttctacttcatccatgatcacgacaaagggttttgctgacaatgacactggtgaaggagtgatcgctggcacctcttcaatgcccatcagcacagagggagttggttggactgctggttcagatgagtggagatacgatccttcaggtgctatgaccccttaccgtcatcctcatacccaggtaatgatgcctcatgaggataccccagcaatcctagaatcagcagagttgcctacggttggttccacgaggtttgaagagaagattgttgtacaagagactcctgaagttatcagaactgatgggaaagatgctgaattgaagaggagaaagtttcagagaaataagcaggtaatgaaggaaacatttgatgaatgggaggaagcataccagcgagatgctgaacagagaaaaactgatgagttattcatgagggaagcattgcatgaagctcagagggctgcagatttgtgggaggtgccagttggagcagtgctagtacagaatggagaaattattgctcgtggttgtaatttagttgaagatctcagggattcaactgcacatgctgaaattgtttgcattagagaagcttctaacaaacttaagacatggcgcctggcggatacaacattgtatgtaaccctggagccttgtgccatgtgcgctggtgctattcttcaagctagagttgatacggtggtatggggagccccaaacaagcttcttggagctgatggcagctgggttaggcttttccccggtgatggtcaaacaagcagtttggattcagcaaacacaaaccagggggctggacctgtccaccctttccatccgaagatatccataaggcgcggcattctctccgctgagtgctcagaaataatgcagcaattcttccatttgaggaggaagaaacagaagccggagtcgccacctcatgcgcacccccaagggcgcaaccatccagtcaagttcttcagtaagatgcatcacatgtttggcacaatcttctgtttgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MYSSYSAVALALRAAKPSSCAHSTYHHHHHHHHHGDGGDCHQQE LLLPLNPRAAAAPRFMLDGYLLRHSAHFLLLSARLRPPPPPPRCCHRRRRVAARCCCC GGGGSVAGHVSWRLDPPRVCRCSGHGAGRSSDLGAVYRRRLECRCGGGGGRLDLGAGC GPRRDAPRLVGRAVRQEVWEYEGGEWPHTSCSMECHTDWGDEEEDCGIAQWEAPPRFR LSRRRSEEDEGDRCRDCHRRKDAESDYYDEDEYSGRQRERRNMNERHGRFTDSNQRRR DQRDYHDDDDYLEFRRWKERRERRDSEFDDAVARRGIEDRRYSEDDRKYDRRRERKDF GYEGAVDVRRGASRYTDNNQRSDWRTEDRDYEVDVRREGKHRRNDDQRYVTRHQQRTD GTEEDVSLLESYRWHDEEYDYDDRDIAERRYYSGRTQKSARASALHEDESNRASSSRN IVDTRVARNKENSASRVRWHDNVDKRAEQTSEERNQRYSSSVVQSFDEKKHDHDDAQL ISVRDSRIGTRDVRVITEDDANLASSSKNTMISKHHNTVDQKSTTRKDDSRNRSQKIM ELSEVRGTNTEHDSRTQSYHQEDRRRYIENRASSLQSSVKTTSDTRTQVDQHDEVDQQ VVALTDSRRRSEKLTDIKMDSTSNVSRTSLKQRNSDEVNQMDIDDRSNSVHNITHITR DKKRYVNQQVIHETDIDVQNVTHVDVSKVRASDISVSRNSQKASETRSDMANSQLEQI HASNSSMVRGPQSYLEAALHNRVYSTSATDIVNTTAEKHGQVEASTNNAAIASTSESH IQARIEDSAVNTIGSVQEQIDLTRICASDSTVVSSSHGLDTRSGQVSRTSATNLVDRT RETRDKSDQQITQASNIDRNDHVTSKFYESSQDSRQSLARLKDAGRLMEHNVGLNWQQ EESRRVSNDMDIATLEMQSTEDGSSMVPVDEEKRPMITGSSEQEVRSETTAGSSIPSG SSARQPVNESLLESAARLEKSSTFHVGQFVGEVRKGVSDADTTLTRKNDKSIMEGIAR SSSRSRMGGPSDEMWDVQSATSQETFKTADKEEGSSVDGGTTSTSLTPKNETALARKV HKSLWAYVADIVRLGWIQRGESLDSNSNRSVKKSSSSNSQNTEGWISSQERDNEGIQK KTESSKPKDHLMKSHTGESLKKESLPTGSQDLLISESGNVPQINTSKGDFISRTSKED AHMTGEKAKQSKVAASPKQNTVGGFSEDSTPTLVDVAKKHFPEHEASTSSMITTKGFA DNDTGEGVIAGTSSMPISTEGVGWTAGSDEWRYDPSGAMTPYRHPHTQVMMPHEDTPA ILESAELPTVGSTRFEEKIVVQETPEVIRTDGKDAELKRRKFQRNKQVMKETFDEWEE AYQRDAEQRKTDELFMREALHEAQRAADLWEVPVGAVLVQNGEIIARGCNLVEDLRDS TAHAEIVCIREASNKLKTWRLADTTLYVTLEPCAMCAGAILQARVDTVVWGAPNKLLG ADGSWVRLFPGDGQTSSLDSANTNQGAGPVHPFHPKISIRRGILSAECSEIMQQFFHL RRKKQKPESPPHAHPQGRNHPVKFFSKMHHMFGTIFCL</aaseq> |
| Gene Sequence |
<dnaseqindica>70..4355#4441..4528#4965..5092#6150..6420#gtctctcactctctctcctcccccaactcctcatactctccgctctccggcgaccggcggcgaccggccatgtacagctcatactccgccgtcgccctcgcgctgagggccgccaagccgtcctcctgcgcccactccacttaccaccaccaccaccaccaccaccaccacggcgacggcggcgactgccaccagcaggagctgctgctcccgctgaaccctcgcgccgccgcggctccccgcttcatgctcgacgggtacctcctccgccactcggctcacttcctcctcctctccgctcggctccgccctcctcctcctcctccccgctgctgccaccgccgccgccgagtagccgcccgctgctgctgctgcggcggcggcggctccgttgctgggcacgtctcttggcgactggatccgccgcgggtgtgccgctgcagcgggcacggcgctgggaggtcgtcggatcttggagcggtttaccggcggcgacttgagtgccgctgcggcggcggtggtgggaggttggatctcggggcgggctgcgggccgcggcgggatgcgccgaggctggtggggagggcggtgaggcaggaggtgtgggagtacgagggtggcgagtggccgcacacgagctgttcgatggaatgccacacggactggggcgatgaagaggaagactgcggaattgctcagtgggaggcgccgccgaggtttcgtttaagtagaaggagaagtgaagaggatgagggtgacagatgtagggattgtcatcggaggaaggatgcggagagcgattactatgatgaagacgagtacagtggccggcaaagggagaggaggaatatgaatgaaagacatggtaggtttacagattctaaccagaggagaagggaccagagggactaccatgatgacgatgattatcttgaattcaggcgatggaaggagaggagggaaaggagagactctgaatttgatgatgctgttgcaaggagaggaattgaagatagaagatacagcgaggatgacaggaaatacgatcggagaagagaaaggaaggattttggatatgagggtgcagttgatgtcaggagaggagctagtaggtacactgataataaccaaagatctgattggagaacagaggatagggattatgaagttgacgtgaggagagaaggaaagcaccgtagaaatgatgatcaaagatatgttacacgacaccagcagagaactgatggtacagaggaagatgtttcactattggagtcgtatcgttggcatgatgaagaatatgattacgatgatcgagacattgctgagaggaggtactactccgggagaacccagaaatctgcaagagcatctgcattgcatgaggatgaatctaacagggcttcgagctcaaggaacatagttgatacaagggttgcaagaaacaaggagaattcagcctcaagggtccggtggcatgataatgtagacaaacgagctgagcagacatctgaagagagaaaccaacgatattcttcctcggtggttcaatcttttgatgagaagaaacatgaccatgacgatgcacagcttatcagtgtaagggattctaggataggaacacgagatgtcagggttataactgaggatgatgcaaatttggcctctagttcaaagaacactatgatttcaaagcaccacaacactgtagatcagaaatcaacaacacggaaggatgactcaaggaatagatcacagaaaataatggagctgtcagaagtcagaggtaccaacactgaacatgactcaagaacacaaagttatcaccaggaagatagaagaaggtacattgaaaatagggcatcttctcttcaaagttctgtaaagacgactagtgacactagaacacaagttgatcagcatgatgaagtggatcagcaggtggttgcactaactgactcaaggagaaggtctgaaaaactcacagatataaaaatggatagtacttctaatgttagcaggacctctctcaaacagagaaattctgatgaagtgaatcagatggatattgatgacagatctaattccgttcacaatataactcatattacaagagacaaaaagagatatgtaaaccagcaggtaatacatgaaacggacatagatgtgcagaatgtcacacatgttgatgtttccaaagttcgtgcgagtgatatttctgtctcaaggaattcacaaaaggcttctgaaactagatctgatatggcaaatagccagttagaacagatccatgctagtaatagttccatggttaggggtccacaaagttatctggaggctgcactgcacaaccgggtatactcgacttcagctaccgatattgttaacacgacagcggagaagcatggacaagtcgaagctagtaccaacaatgctgctatagcaagtacttctgaaagtcatatccaagcaagaatagaagattcagctgtaaatactattggcagtgtgcaagagcagattgatcttactagaatctgtgctagtgactccacagttgttagcagttcccatggtcttgatactagaagcggtcaagttagcagaacttcagctacaaatcttgttgacaggacaagggagacccgagataagagcgatcagcaaattacacaagcttcaaatatagacagaaatgaccacgtaacatccaaattttatgaatcctctcaggactctagacaaagtctagcaagattgaaagatgctgggagattgatggaacacaacgtgggtttgaactggcagcaggaagagtcaagaagagtttctaatgacatggatattgctactttggaaatgcagagcactgaagacggatcatctatggttcctgttgacgaggagaaaagaccaatgataactggaagcagtgaacaagaagtaaggagtgaaactactgctggaagcagtataccaagtggttcaagtgcaagacagcctgtgaatgaaagcttgttagaatcagctgctcgattagagaaatcatctacatttcatgtcgggcaatttgttggtgaggtccgcaaaggagtgtcagatgcggatactactttaacaaggaaaaatgataagtccataatggaaggtatagcaagatcttcatctagatctagaatggggggaccatcagatgagatgtgggatgtccaaagtgctacttctcaagagacctttaagacggctgataaggaggaaggctcatcagttgatggaggtactacttcgacttctctgacacccaagaatgaaactgctcttgctagaaaagttcacaaatcactctgggcctatgttgcagatatagtccgtcttggttggattcaacgtggtgaatctcttgattctaacagcaatagatcagttaagaaaagttcatcaagtaattctcagaatactgaaggctggatttctagccaggaacgcgataatgaaggcatacagaagaaaactgaaagttctaaaccaaaagatcatctgatgaagtcacacactggagaatcactaaagaaagaaagcttgcctactggttcacaagatctcctaatatcagaatctggtaacgtacctcagataaatacatctaaaggagattttatatccagaacttctaaagaagacgcacacatgacaggagaaaaagcaaaacaatcgaaagtcgctgcatcaccaaaacaaaatactgttggaggcttttctgaggacagcacgccaacattggttgacgttgcaaaaaaacattttcctgaacatgaagcttctacttcatccatgatcacgacaaagggttttgctgacaatgacactggtgaaggagtgatcgctggcacctcttcaatgcccatcagcacagagggagttggttggactgctggttcagatgagtggagatacgatccttcaggtgctatgaccccttaccgtcatcctcatacccaggtaatgatgcctcatgaggataccccagcaatcctagaatcagcagagttgcctacggttggttccacgaggtttgaagagaagattgttgtacaagagactcctgaagttatcagaactgatgggaaagatgctgaattgaagaggagaaagtttcagagaaataagcaggtaatgaaggaaacatttgatgaatgggaggaagcataccagcgagatgctgaacagagaaaaactgatgagttattcatgagggaagcattgcatgaagctcagagggctgcagatttgtgggaggtgccagttggagcagtgctagtacagaatggagaaattattgctcgtggttgtaatttgtaagtactatcatattctgcagctaaatgcaagttgaattagatcttcactttttcttatgttctatctctttcttgtgttcagagttgaagatctcagggattcaactgcacatgctgaaattgtttgcattagagaagcttctaacaaacttaagacatggcgcctggcggtagtattttttacatccagcaaaattttttcctggctcaacaatgtggaagcatcggaacaattgaatcttattttaatgtttcctttttaaatattctcctgttcatttttttctggtgaaaatgatcacaagttagacgcttggtattgaagatggatgattgattatgcataaatacttctatgcactaattatcttttattttcagacttgcccttgcccttatgttttggttgataaattgtgcacatgttctttttttagagtagtaaggttattgctttccagttcacaaaattttaagtgtaagccatcctttttgtgaggattcctcagatccttttcaaatgaaaggttttcatgtactttatgatgaatttactttttgtttgaatcatcttcattagaaaatttctgatcaaattcatttcaggatacaacattgtatgtaaccctggagccttgtgccatgtgcgctggtgctattcttcaagctagagttgatacggtggtatggggagccccaaacaagcttcttggagctgatggcagctgggttaggtatgggatccagtttcctgtgaaattttataatgtatcattttcgaagttccttttcctattattctaatgattcaaaatcttgagatagtgttgtacttcagaccacatagcaattattgtctgtctttctgcaatttggagtggtttcatgggctcacatggcctcctattcttctgacagccaattgtgcgcactgtattttcctgaaatatctctgaactgttcccgcattcctgcaacccttttgtactatacagggaagggctggtcaaggaggtggaaaatttccttctatgctctccttggttggctgttctaggtctctcttatgtcaaagccagtaacatacttacacctcagcacccaataggaggcttcgttacatgctgttgcttccgcaccaccatagctatctggtctacctctgttaactggcttttaagcatgctagtgtggttgtgattgtgaaaaacaacaaagcaaagttctttttgtttgcttttgtgggccaaagtcaatatcaccccgtaatttatcatgtggcaacctgccaccgaaacaccagctggggttataattccattgattgtaagctgccccgtgttatggtataggggtttataggcaaatttgtgaaagaaaatgggggtaattgttttttatccttctaataaatgcattatgtagcacataaaagctagattctattaaaaggtcggtttgattataggttggtgacatatgtaattcagttaaaatggtgaagcttgttactctgatgctatgcttattgaaatgaaaggagatatttacatttttatgtctcctttctaagatgttggaatttggaactattattttgtactccagttgagacaacaatattcccaactacaggcagttctgtagggtgtagaatttcaagtaaatagacttcaaccatgtgtgagaacttgaggtggcgagggaaaacctcccagtcccacatgtttcatttcccacagggggactggaaaactaagtgaattgttttctgtttcacttgttttataggcttttccccggtgatggtcaaacaagcagtttggattcagcaaacacaaaccagggggctggacctgtccaccctttccatccgaagatatccataaggcgcggcattctctccgctgagtgctcagaaataatgcagcaattcttccatttgaggaggaagaaacagaagccggagtcgccacctcatgcgcacccccaagggcgcaaccatccagtcaagttcttcagtaagatgcatcacatgtttggcacaatcttctgtttgtagtaacatttccttctatttttctctgctcggagttacatttcttccgttgattcagtcccctttcttgtgtatttccctatgtgtatgccccccttttctcccctgctttgggttattctgtaatgttagattggaggtaatttgagccgaggaaactaccatcagttttc</dnaseqindica> 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| External Link(s) |
