Difference between revisions of "Os06g0556000"

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(Created page with "{{JaponicaGene| GeneName = Os06g0556000| Description = Similar to Amino acid carrier (Fragment)| Version = NM_001064388.1 GI:115468507 GeneID:4341285| Length = 6811 bp| D...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0556000|
 
GeneName = Os06g0556000|

Revision as of 20:24, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0556000

Description

Similar to Amino acid carrier (Fragment)

Version

NM_001064388.1 GI:115468507 GeneID:4341285

Length

6811 bp

Definition

Oryza sativa Japonica Group Os06g0556000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22062226..22069036

Sequence Coding Region

22062315..22062444,22066665..22066898,22067258..22067351,22067476..22067693,22067779..22067918
,22068054..22068701

Expression

GEO Profiles:Os06g0556000

Genome Context

<gbrowseImage1> name=NC_008399:22062226..22069036 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22062226..22069036 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaaggacgtggagatggcggtgcggaacggagacggcggcggcggcggcggctactacgccacccacccgcacggcggcgccggcggcgaggacgtcgacgacgacggcaagcagcggcgaaccggtaacgtatggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgcatgggcaacggcgcagctcggctgggtggtcgggccggtgactctgatgctcttcgccctcatcacgtactacacctctgggctcctcgccgactgctaccgcactggcgatccggtcagcggcaagcgcaactacacctacatggatgccgttgcggcctacttaggtggctggcaagtctggtcctgtggtgttttccaatatgtcaacctggttgggacagcaattgggtacacaatcacagcatccatcagcgcagcggctgtgcacaaggccaactgctaccacaagaacggccacgatgccgattgcggtgtctacgacaccacgtacatgatcgtctttggagtcgtccagatcttcttctccatgctgcccaacttcagtgacctctcatggctttccatcctcgccgcggtcatgtcattctcatactcgaccattgccgttggcctctcgcttgcgcgaacaatatcaggtgctactggtaagactactctgactggcgttgaggttggagttgacgtcacttcagcccagaagatctggctcgcgttccaagcgctcggtgacatcgcgttcgcctactcctactccatgatccttatagaaattcaggacacggtgaagtctccaccggcggagaacaagacgatgaagaaggcaacgctgctgggggtgtcgaccacgacggcgttctacatgctgtgcgggtgcctggggtacgcggcgttcgggaacgcggcgccggggaacatgctcaccgggttcggcttctacgagccctactggctgatcgacttcgccaacgtctgcatcgtggtccacctggtcggcgcctaccaggtgttctgccagcccatcttcgccgccgtcgagacgttcgccgccaggcggtggccgggctcggagttcatcacccgggagcgccccgtcgtggccggcaggtcgttcagcgtcaacatgttcaggctgacgtggcggacggcgttcgtggtcgtcagcacggtgctcgccatcgtgatgcccttcttcaacgacatcctgggcttcctcggcgccgtcgggttctggccgctgacggtgtactacccggtggagatgtacatccggcagcggcggatacagcggtacacgtccaggtgggtggcgctgcagacgctcagcctcctctgcttcctcgtctcgctcgcctccgccgtcgcctccatcgagggcgtcagcgagtcgctcaagcactacgtccccttcaagaccaagtcgtga</cdnaseq>

Protein Sequence

<aaseq>MAKDVEMAVRNGDGGGGGGYYATHPHGGAGGEDVDDDGKQRRTG NVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLLADCYRTG DPVSGKRNYTYMDAVAAYLGGWQVWSCGVFQYVNLVGTAIGYTITASISAAAVHKANC YHKNGHDADCGVYDTTYMIVFGVVQIFFSMLPNFSDLSWLSILAAVMSFSYSTIAVGL SLARTISGATGKTTLTGVEVGVDVTSAQKIWLAFQALGDIAFAYSYSMILIEIQDTVK SPPAENKTMKKATLLGVSTTTAFYMLCGCLGYAAFGNAAPGNMLTGFGFYEPYWLIDF ANVCIVVHLVGAYQVFCQPIFAAVETFAARRWPGSEFITRERPVVAGRSFSVNMFRLT WRTAFVVVSTVLAIVMPFFNDILGFLGAVGFWPLTVYYPVEMYIRQRRIQRYTSRWVA LQTLSLLCFLVSLASAVASIEGVSESLKHYVPFKTKS</aaseq>

Gene Sequence

<dnaseqindica>90..219#4440..4673#5033..5126#5251..5468#5554..5693#5829..6476#gcatcgcatcctctccccacacaatccccacccggcctagcgagcgagagagagggaagggttgcgacttgcgactcgcgagcggcgagatggcgaaggacgtggagatggcggtgcggaacggagacggcggcggcggcggcggctactacgccacccacccgcacggcggcgccggcggcgaggacgtcgacgacgacggcaagcagcggcgaaccggtacggatcaaacccgaccccgacccctcgtgattcccccgtctcgttaaccctcctcttctcctccctccgccatggatgatgatgtggctgtgctgttgtgtttccgtgcggtgcgtgcgtgtccttgtggtggattggattttttgcggtttttgcttcctatttttgggcgcatatatgcccgctttatcaatctcgcttagagtcgagtggatcatcctactcatcaaaagggaggtctagaaacacggtgcacgcgagatttctggtagggaaaactccacgaaaagttggttcaaattcgagacaaagtagttcgaattcaaaaaaaaaaaaccgaaacgtttcaagggatcggaaggcgtgaacaaccatggtcctagctggacccttgtcatctcctcggtttctgttccaatctagcgagcggcgcggcgccgcctcggatggatttttggttggtgctgactgcttgacttctgcgttttcttcctcccttttcccggaaactcccatggattttggttggttggtggcgctctggtgcggtaggcttcgtccatagccaacaccgccaattaagccgccatgaatggacatcgttgtgcgtatgtatcgtggtaaaaaaaaatcgaactacagtgttctctgtgaagtgaaaccctggagaatttttactgcgttcaagataaacggtgtgcgcttttttttttgtgtttgtgtttccctttttgggttccccaacggagcgcatgcaagcgtccggcgacgtgtacgctgggtttttttttccagcacttcgtctagatctgtctgttcctagagtccaaaattaattaattaattaattaagtatgtagaggttcaaaattaattaattagttagtggaagcacgggaggtatggtggtggagtcgtggacacttcacacattaggattaaaatccgtgcatgaattttagtgagatcaactatatatcgcttcacccatcaagactaaaatcccgtgttaaggcttgtttagttcataccaaaattgaaagtttggttgaaattgaaacgatgtgacagaaaaattagaagtttgcgtgtgtaggaaagttttgatatgatgaaaaagttagaagtttgaagaattattttggaattaaacacggcctaaaattttaatgagatcagggatatatcgctagtttattagttttcatcttttagggcatatattagggaacatatttataaaaatgtgtgggttttcgagtctatttgaattgtttccctaccaattttttgtagtgccaaaatctaggcaagttttggcactaccaaatatttggtaaggtaagattgttttttatcatatttggtttgctacaacatagagtcaaaatgtgaaattgtagtaaagaatgttcataatgccaaatctatattaggtaggagtaccaataaatgggcttcaattcaaatcaaacacaagtactatttaaattaccaaaatattggtagggcagtttttggtagcaatccaaattagcccttcatcttttagtgtttcatgtgtatgtgtatgtgctatctaatcgaaaaaaaaaattagttaatcaagaattaactaatttttatatcacgtgaataatttggcttgcgccgttccgcgtcgtgcgcgctgtcggatgctggatgcaagaggccagagccaaccatccacagcacctagcacagcagggggtcgcgcgctggtcaacagccgcgtacccccacggtcaacgcgcatcagccactcgatctgaggcatgcacggtctagatgatgccacgttcgcaataaaagctccccctgatcaacaagtgacgtgctgtttcacggagtgtgacgtggcacgggcagtatagtacgtgtacgtgtgaacacacgcgcatgcgacagcgcatttccacgcgtgcaattctgactcgcaaaaagcgtatagtagtactagctgcttttttgcaatttgtattccttgaacggcacaacgtgtttggtggaaaattcataaaagtcaccgtactttttgacgaaaaacggatatatgcttggttgagcggtccactttaagctaccaatatcgattatcttatcgttagtcagcttcagtgagatcatatctaaagtaactggtgctgaactcgtcaaggaatcattccggcggcctgaaagcccctctttggatggctctgcgcctctgcctggccgcttccgatcggccggaatctatgtcctcgtaccttttacgcagcaccaactgatgattgcgtgctttcaacatattttggtttggaacgcagtgatctcgtattttattcgaaatgcgtaaaagctttgttgattctacggaaacgctctttggtttgtagaaaaaaaacccttcatatatcttttcctttgaaattcctttgtaatgacaatcttgtaaatagtttggaatttttttcataagataatatcatccgacgtgactagggattttaagtttttgtttgcgaccacttatcttatttaaaaaatttgtgcaaatagaaaaaacgaaaagctgtgcttaaagtactttggataataaagtaaataataaaaagaaataataattccaaatttttttaaataagatgagtggtcaaatagtgcaaataaaaactcagaatagggacggagggagtagtttctaaggcctggtggtcggcatgaaccaatctttttttttttctagctgtacctaaacacctgttttaaagttttctttctcgtagaatcatactgtatgtagaattgaagaaactatgccatcctattcatgtgcttttacatactcttccctattcttatgttttgagttttcttccttctagagggcccttgtttctctgtaatgtgaagttctttagtgccaactgccaagaccttaatcacggactaagggtctgtttagcggagtttaaaattctgatcaacaaccagctggtagccaacttctaagaatctggaaaaattagattctataactacagcttctcagaatttataccaaaaactgatctatttaggggagattctgattctggaaaaagctgcaggagctaaaatctcccttaaacgggctctaagtggatccactatatatatagtggacttttgtcttatctcagttctttcaacggagtactaggcacagcccatattgtgaaggagaagaaaatggccagaccttttgactgcgaggcatgggctggatagtctttgggatgaggtgaccgatgcgagggtaatagatgcgccgtagacctgctgtttctgaccttttggcgcacagctctacgcacgacaactctactccgtgtaggatagtgtaggctagtgtagcggtactgagtattccgtattcgtgctgtacaaccgtggtgtgctccctgcgtacggtggtttggggattttttttcacaaaatatgtggattttttaaaaataaagctatctaaatcttgcggagttattgtaatggtattttttgggataatttttcatgacaggtattgtgcattgatatagttagtgggcctttttgaatggttaaagtgaaaatatttttcactgaacgctttctaaacgtcaatgcatttatgaatagagtagagagtactatggagtctgaccttctcagatgggagactctctagctaccgggatgatactagacctttgtgttcatcaagagatcacatgttcacatgtgtaggccctttatatatgttgagttgttgacttgtgttcttcagagggtgacagtctccatggctcaatgatttgtttggaattgtctattctgtttcagttggcatgggacatgggtcttgtactctgtcccaaagtgtgcatgtgtcctcatccgattaatcaaggcactgtgttaatcattctttagaaactcattaactgtatgcatacatagactgattgaggggctacagatcataaaccatggatgcatgtgggtattaatcattttttaccctcggtttggtgcatgctgtcactaagtggagtgaacttgttcacagttgagattatgagtaaatatcaaggagacaagaactgaaattcgaaaggaattaaagtcataaatgaaatgattgaattttcagaatgttgaaggactgaaaacttgtgcaattcgttgagcaggtaacgtatggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgcatgggcaacggcgcagctcggctgggtggtcgggccggtgactctgatgctcttcgccctcatcacgtactacacctctgggctcctcgccgactgctaccgcactggcgatccggtcagcggcaagcgcaactacacctacatggatgccgttgcggcctacttaggtaaatactattccttccatttcaaaatatatggagctgttgactttaatataatgtttgttcattcgtattatttaaaaattatataaatattatttattttgttgtgacttgttttatcaatatagaaactagtcttaacttatacttttacatatttacactaaaattttgaataaaacgaatgtcaaacgttatacgaaaaatcaacaccgtcatacattttgaaattgaaatggaggtaggaataacaagctgtgtctacatgaacatcgatatgcatgcgtcagagaatttagaattttttctctgaattcagagatgtcatacgagccttgttgctgttcttaaatatgcaggtggctggcaagtctggtcctgtggtgttttccaatatgtcaacctggttgggacagcaattgggtacacaatcacagcatccatcagcgcagcgtaagttctgaagaattgatctgttcataaatcacaatggcatactacaattctccattgctttcacaactcaatgctatgcacggttctgacttctgaggttaatttgaatgatcttctacagggctgtgcacaaggccaactgctaccacaagaacggccacgatgccgattgcggtgtctacgacaccacgtacatgatcgtctttggagtcgtccagatcttcttctccatgctgcccaacttcagtgacctctcatggctttccatcctcgccgcggtcatgtcattctcatactcgaccattgccgttggcctctcgcttgcgcgaacaatatcaggtgaagaaatctttctgaagatggtatcagtgtcactgcatatatagtttgtaagctttctcatcatctccatgtgtctgtacaggtgctactggtaagactactctgactggcgttgaggttggagttgacgtcacttcagcccagaagatctggctcgcgttccaagcgctcggtgacatcgcgttcgcctactcctactccatgatccttatagaaattcaggtaagctgtgcacagcaaagttcagagtttgagaaacatttgagcaacagtcacaaacatgtctcagtttgtttgcttgcaaggtttttaagtaaccgatgatgagtctgaaaaaaatggcatttgaaattgcaggacacggtgaagtctccaccggcggagaacaagacgatgaagaaggcaacgctgctgggggtgtcgaccacgacggcgttctacatgctgtgcgggtgcctggggtacgcggcgttcgggaacgcggcgccggggaacatgctcaccgggttcggcttctacgagccctactggctgatcgacttcgccaacgtctgcatcgtggtccacctggtcggcgcctaccaggtgttctgccagcccatcttcgccgccgtcgagacgttcgccgccaggcggtggccgggctcggagttcatcacccgggagcgccccgtcgtggccggcaggtcgttcagcgtcaacatgttcaggctgacgtggcggacggcgttcgtggtcgtcagcacggtgctcgccatcgtgatgcccttcttcaacgacatcctgggcttcctcggcgccgtcgggttctggccgctgacggtgtactacccggtggagatgtacatccggcagcggcggatacagcggtacacgtccaggtgggtggcgctgcagacgctcagcctcctctgcttcctcgtctcgctcgcctccgccgtcgcctccatcgagggcgtcagcgagtcgctcaagcactacgtccccttcaagaccaagtcgtgatcccgatcacgacggccttttttttttgcttttgcatcctgatgaaaaaagatttcagaaacatatgcacaacaaatgccggaagttagccaagagtttggtcaccagctcggtgcgttggtcggtcaggaggaggagggttcaacttgtgtaggttaagaaatgctagagagtatggagaccatcttcgattgctgctcatgtatagaaaaaagaggaagcttcgtattcatgtaatgaatcggaatgtttaacaaacaaggcttgttctgaactcttctcagggacaggcatggataacagattaaagataaatgaatgtgttagacaagggc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0556000, RefSeq:Os06g0556000