Difference between revisions of "Os06g0595700"

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(Created page with "{{JaponicaGene| GeneName = Os06g0595700| Description = Transposase, IS4 domain containing protein| Version = NM_001064517.1 GI:115468765 GeneID:4341428| Length = 4452 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0595700|
 
GeneName = Os06g0595700|

Revision as of 20:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0595700

Description

Transposase, IS4 domain containing protein

Version

NM_001064517.1 GI:115468765 GeneID:4341428

Length

4452 bp

Definition

Oryza sativa Japonica Group Os06g0595700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24307642..24312093

Sequence Coding Region

24307642..24307733,24308671..24308767,24309223..24309792,24309876..24310458,24310724..24310837
,24310917..24311224,24311306..24311378,24311477..24312093

Expression

GEO Profiles:Os06g0595700

Genome Context

<gbrowseImage1> name=NC_008399:24307642..24312093 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24307642..24312093 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacaacacggctctctcctccggccgccaccttctctccggtgagcacgctgcctttccccttcttccctcctcttgcaaagctaggattgcacgtgcacccattagagttggagaagaccaacctcctccttcctgggaccttgtaccctctccttcctgggaccttgtaccctctccaagagatcttttgttgctgtgctaagtgcaaaattgtaaataatttgtgtgctatctatagtactactatggatatgagagcaagagaccgcgctagaaagaggagggaagaggaggacgatgatatgatgttgtttattttccctgcactacatttgttgagttctagtggagcaagggaaaagaagcgatgccatacatcaaagataacatgcgaggagcgtgttcgggagttgcttgaagggcatgtaaaaaattgccgggtagcattcaggatggagccggaaatatttatatctttggccaattaccttagaactgaaaagttggtcgatgatactaggattaaagttgaagagaagttggcgttcttcttatacatgcttagtcacaatgcttcatttgaggatttgcaagagaaatttgggcacagtggggatagctttcatcgtcacgtaaagcatttcttcaactcagttgtcccttcgctctcgaagcggtttctgaagcctccaaatcctaatgaagttcattggaaaatagaaaaagatcctagattttatccctatttcaagaattgccttggtgcaattgacggcacccatatacccatatctatatcatctgacaaagcagctccatttagaaataggaaaaatactcttagccaaaatgtgatgatagcttgtgattttgatctgaagatcactttcatgtctactgggtgggaggggtcggctacagatgccagggttcttacctctgcagtaaacaaaggcttccaagtaccccctggaaagttctatttggttgatggtggatatgccaacaccaattctttccttgcaccatatcgtaaagtcaggtatcatctaaaggagtatggggtaggtcggcgtagacctcaaaactacaaagagttatttaaccatcgccatgcggtattgaggaatcatgttgaaaggactttgggggttgtaaagaagcgcttccctatcctcaaagttgcaactttccacaaaatcaataaccaagtgaagataccagtggttgctgcagtgttccataatattattcgatcactgaatggggatgagcaatggttaaataaccaaccacataatatccatccaagcaattatgttgacctgccagatgttaatatgcttggaagaggttctccaaggttgaccatgcttttagcgaaagctgcacaaaagaagaactctccgaaaggtcgtcctacaaaaaagcatggaggttctccaatagaaaaaacaagaacctcttggaacccagccctagagaagattcttgttgagttattgcatgagcacaacactcctgagtataggggtcagaatggatggacttcagaagctcggaacaaaatcgtgaaggaattccatgagaaggacagatatgtctgcttaacaaagtcccaaatccaagaaaaggagaaagagctaaaaagagaatataggatgctgaaagaggctagaaaacaaagtggagcttcatggaataaccagagatgcatcattgaggctgagcctgctatatggaacaatataatcatctcatttcctaaagccaagaagtttcgcaccaaatctttccctctatttgaggccttgggagaactttacgatggatatactgcagaaggaacctacaatttcacctcaactgagccattgcaacatccaatcattactcaagttgagagtgatcaagatgatcttggtaacactgagattatatttctagattatgaggacaccttggcttatcaagtacaagatgatgtagatgcaactgaagatgataatgcaaatgctgaaaggcttaaagagatgccgcatagaagggttgttgctgtaccaagaaacaaagaagaaaaagaacccaagaggcaaaagaagagtgttggcgtagaaggacttatggaaaggtaccttgatatgaggaccaaacaaactgaagatgaggctgcacaattagcaagagaaaaggaggctcatttagcaagagaaaaggaggctcagttagcaagagaaaaggaggctcatttagcaagagaaaaggaaagtaatgatttttcaatcaagaggtgcatatctgttctgaattcgatggatgtgacaaaggcagaaaaggtcaaagcatataccgtcttcaagaattcagagaacagagagatttttgtgagtgcttgtgatgaggatccagaatctgccttgagttggttaagaagtgagatggcttga</cdnaseq>

Protein Sequence

<aaseq>MATTRLSPPAATFSPVSTLPFPFFPPLAKLGLHVHPLELEKTNL LLPGTLYPLLPGTLYPLQEIFCCCAKCKIVNNLCAIYSTTMDMRARDRARKRREEEDD DMMLFIFPALHLLSSSGAREKKRCHTSKITCEERVRELLEGHVKNCRVAFRMEPEIFI SLANYLRTEKLVDDTRIKVEEKLAFFLYMLSHNASFEDLQEKFGHSGDSFHRHVKHFF NSVVPSLSKRFLKPPNPNEVHWKIEKDPRFYPYFKNCLGAIDGTHIPISISSDKAAPF RNRKNTLSQNVMIACDFDLKITFMSTGWEGSATDARVLTSAVNKGFQVPPGKFYLVDG GYANTNSFLAPYRKVRYHLKEYGVGRRRPQNYKELFNHRHAVLRNHVERTLGVVKKRF PILKVATFHKINNQVKIPVVAAVFHNIIRSLNGDEQWLNNQPHNIHPSNYVDLPDVNM LGRGSPRLTMLLAKAAQKKNSPKGRPTKKHGGSPIEKTRTSWNPALEKILVELLHEHN TPEYRGQNGWTSEARNKIVKEFHEKDRYVCLTKSQIQEKEKELKREYRMLKEARKQSG ASWNNQRCIIEAEPAIWNNIIISFPKAKKFRTKSFPLFEALGELYDGYTAEGTYNFTS TEPLQHPIITQVESDQDDLGNTEIIFLDYEDTLAYQVQDDVDATEDDNANAERLKEMP HRRVVAVPRNKEEKEPKRQKKSVGVEGLMERYLDMRTKQTEDEAAQLAREKEAHLARE KEAQLAREKEAHLAREKESNDFSIKRCISVLNSMDVTKAEKVKAYTVFKNSENREIFV SACDEDPESALSWLRSEMA</aaseq>

Gene Sequence

<dnaseqindica>1..92#1030..1126#1582..2151#2235..2817#3083..3196#3276..3583#3665..3737#3836..4452#atggcgacaacacggctctctcctccggccgccaccttctctccggtgagcacgctgcctttccccttcttccctcctcttgcaaagctagggttagggttttcttctcttctccctttcctgtcgtcgccgccatctctcttctcgccgtgcagctttttggtgagtgagcgcttagcgattcgtcgtcctcctcctcgtatcctgctcgatctggtgagttcttgatttgggcgtggagctttttttcttggttgggtggggatgagttcttgatttgccgccgccaccgcaccgcccaactctggttcttgatttgagttcttgattcacggtggctttgaggcagcagatggtgagagcgagagctgtacggtggctatggaaacatgcttgccttgattagttttgcttagtgtgactgatgctgtgatgcttgcctgagcatgtcttgtaaaattgactatacaagtttttacagtgaagtactcagttcttggtgctttcggagtcccaacttgtggttgttggttatatttctgtttggaaattacaagggttgggtgtcctaatcttgaggattgtagagctatggaggtactctgtaattagtttaacatttctgaattgtaaactaattctatcgtcattgtttcacaaacaaactagcaacaaattgcagtagtatatacagtaatgtatacttaaactgatttattttaaactaacaacagtagcttttagtctcattagactaacagatttgttttcctcaacatgatacttgtataaaacatgtttatcatagctattcaagcactaatatgtctagtgttaaatgagctgattgggtgattaattctgtacccatgttataatgtatttgatgatgagatccttctatttgattgaaaaacagcagctcctactttgatgctagctagctctagttctgggttttatgtaactctagttctagttctgaatttgagttgtcagtgatgtgtataagttgtgcttgttttgtagattgcacgtgcacccattagagttggagaagaccaacctcctccttcctgggaccttgtaccctctccttcctgggaccttgtaccctctccaagaggtactagatctatttattccctttgctttaagttgtttatctatattttgtgatgtaaatataaaaaataaaagaagtggtgtaatgtagaccaaaatttcttttcctttcaacatacggttaaatttgtataaaaaagcatagagaatatacaagttctcagatttttcagatttctgaattctgaacatgctcggcgctaactaataaaagatcatctgtaactaaatttgacaactaaatttggtaagtgctactgccatgtaatctgctttttcatacattctgtaagtgctactgccatcaattattgttgcactgtgcactctttaagaaaaaaagattcttattgttcttttcatttttcccatcaatttttaaatatgcttcataacttggatcttcttaagattaattcccatagtttagtgattcttttgtgattatctttctagatcttttgttgctgtgctaagtgcaaaattgtaaataatttgtgtgctatctatagtactactatggatatgagagcaagagaccgcgctagaaagaggagggaagaggaggacgatgatatgatgttgtttattttccctgcactacatttgttgagttctagtggagcaagggaaaagaagcgatgccatacatcaaagataacatgcgaggagcgtgttcgggagttgcttgaagggcatgtaaaaaattgccgggtagcattcaggatggagccggaaatatttatatctttggccaattaccttagaactgaaaagttggtcgatgatactaggattaaagttgaagagaagttggcgttcttcttatacatgcttagtcacaatgcttcatttgaggatttgcaagagaaatttgggcacagtggggatagctttcatcgtcacgtaaagcatttcttcaactcagttgtcccttcgctctcgaagcggtttctgaagcctccaaatcctaatgaagttcattggaaaatagaaaaagatcctagattttatccctatttcaaggttcttacctaaacacttatatccttattaatatgctgttttacatttttagaaaatcatatgtggttttttttttgctgcagaattgccttggtgcaattgacggcacccatatacccatatctatatcatctgacaaagcagctccatttagaaataggaaaaatactcttagccaaaatgtgatgatagcttgtgattttgatctgaagatcactttcatgtctactgggtgggaggggtcggctacagatgccagggttcttacctctgcagtaaacaaaggcttccaagtaccccctggaaagttctatttggttgatggtggatatgccaacaccaattctttccttgcaccatatcgtaaagtcaggtatcatctaaaggagtatggggtaggtcggcgtagacctcaaaactacaaagagttatttaaccatcgccatgcggtattgaggaatcatgttgaaaggactttgggggttgtaaagaagcgcttccctatcctcaaagttgcaactttccacaaaatcaataaccaagtgaagataccagtggttgctgcagtgttccataatattattcgatcactgaatggggatgagcaatggttaaataaccaaccacataatatccatccaagcaattatgttgacctgccagatggtgatgaaggcaatgatcaaagcactaatcaagggaatcttttgagggacacgatagcacatcaaatgtggaatgactatcgacagcataggaattagtgggttgtaataagtagtatatttgatttttttttgatgttttgtgagctgtaataactacgacatattacaaatattatgttataaatgaactatggtggttgcatgtgacatacatttgctacaatgcttttgttatgaatattgtgttatgcatcctttctcagttaatatgcttggaagaggttctccaaggttgaccatgcttttagcgaaagctgcacaaaagaagaactctccgaaaggtcgtcctacaaaaaagcatggaggttctccaataggtatgcaattatagaacatgtgaaattcatgtttgaaattattaaatgtagattatacatcaattcttatcttgtgtagaaaaaacaagaacctcttggaacccagccctagagaagattcttgttgagttattgcatgagcacaacactcctgagtataggggtcagaatggatggacttcagaagctcggaacaaaatcgtgaaggaattccatgagaaggacagatatgtctgcttaacaaagtcccaaatccaagaaaaggagaaagagctaaaaagagaatataggatgctgaaagaggctagaaaacaaagtggagcttcatggaataaccagagatgcatcattgaggctgagcctgctatatggaacaatataatcatcgtaagattatttctgaccattacttaattttgtagttaattacattatgcatctttttagtgttttccttttattgtgtagtcatttcctaaagccaagaagtttcgcaccaaatctttccctctatttgaggccttgggagaactttacgatggttagttctatcacaagctgtaatccttgttttcaatatcacaagttataatcatgctttcttgcttaccctttcttgtactcaattttcttgtgtaggatatactgcagaaggaacctacaatttcacctcaactgagccattgcaacatccaatcattactcaagttgagagtgatcaagatgatcttggtaacactgagattatatttctagattatgaggacaccttggcttatcaagtacaagatgatgtagatgcaactgaagatgataatgcaaatgctgaaaggcttaaagagatgccgcatagaagggttgttgctgtaccaagaaacaaagaagaaaaagaacccaagaggcaaaagaagagtgttggcgtagaaggacttatggaaaggtaccttgatatgaggaccaaacaaactgaagatgaggctgcacaattagcaagagaaaaggaggctcatttagcaagagaaaaggaggctcagttagcaagagaaaaggaggctcatttagcaagagaaaaggaaagtaatgatttttcaatcaagaggtgcatatctgttctgaattcgatggatgtgacaaaggcagaaaaggtcaaagcatataccgtcttcaagaattcagagaacagagagatttttgtgagtgcttgtgatgaggatccagaatctgccttgagttggttaagaagtgagatggcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0595700, RefSeq:Os06g0595700