Difference between revisions of "Os06g0622800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0622800| Description = Armadillo-like helical domain containing protein| Version = NM_001064636.1 GI:115469003 GeneID:4341555| Length = 360...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0622800|
 
GeneName = Os06g0622800|

Revision as of 20:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0622800

Description

Armadillo-like helical domain containing protein

Version

NM_001064636.1 GI:115469003 GeneID:4341555

Length

3607 bp

Definition

Oryza sativa Japonica Group Os06g0622800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25927903..25931509

Sequence Coding Region

25927904..25928013,25928119..25928440,25928530..25928875,25928994..25929652,25930179..25930787

Expression

GEO Profiles:Os06g0622800

Genome Context

<gbrowseImage1> name=NC_008399:25927903..25931509 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25927903..25931509 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agtgatgccattgttgcttttgtgaaagctctttgcaaggtctcaatgactgagttgcagtctccaacggatcctcgtatcttctgccttacaaaaatagtagaaatcgcgcattacaacgtgaaccgcatacgtttggtgtggtctcgaatttggaaagttctgtcagaattttttgtatctgttggactgctagaaaatctttctgttgcaatatttgtgatggattctctgaggcagctggcaatgaagtttctggaaagagaggaactggcaaactataacttccagaatgagttccttagacctttcgtgattgttatgcagaagagtaatgctccagaagtacgagagctgattgtccggtgtgtctcacagatggttctaagtcgtgtcaacaacataaaatctggctggaagggtgtttttatggtatttacttctgctgcagctgatgatacaaaaagtattgtcctattggcatttgaaactatggaaaaaattgttcgagattactttccatacataactgagacggagaacaccacattcactgattgtgttaactgtcttattgcgtttacaagcagccaatttaatagtgatgctaatctcaatgctattgcgtttctccgattctgtgctgttaaacttgccgatgaaggatttggttgtcaggaaaagtgtactgatgaacccaggaatttaggcatgtcagatggaaatgccactgtggacaaggatgattctatttccttatggattcctctccttgcaggtttagctaaattgactagtgattcaagatcaaccatcaagagaagtgctgtgggagtactttttgacattttgaaggatcatggacaactcttctcagagtccttttggaccaacatccttgaatctgttatttatcctctatttagcagtgaaaggtcttcatcaaatgatccgacctcaacaccgagtatccctgaggatgacttttcaaatcttgaaacccaaacattggcagtgaaatgtttagtgggtttgtttattaatttctttgatgtgatgcgtccagaacttgctagggttgcatctatagtcacatattttatccgaagtccctacaaacattctgctagcataggtgtatctgctttgatgcgcttaattgagggagttggtggtgaactttccaaggaggaatggaaagacatattgctgcgcttcaaggaatcggtggcacatacttttcttgtattctccaaaattgtgagaatgatgcaagatattgaaattcctgatagatttgaatcttattcagaaaatgatcagtactcagatcatgaaaattatggtaatgaagaagaggaagctaatatggagacaacttcttatgctattgtcaaactgaagaatcatatggctctgctcctcttagttgttcagggaataattaaattatatgaagaacacagaaaatatctgtcttccgatcatattaatattcttttggagatgatatcagctattgcgacacatgcaagtgaagtgagctctgaatcttccttgctgctgaagtttcataaagcatgttcccttatggaagtatctgagccagcaattgtccatttcgaaaatgagtcataccagacctacctcaagcttctgcaagcgctgtttcgtgactatccatccatgtcggaagaaatggacattgaatcacaaatacttcgtgtttgtgagaaaatacttcggatatatctacagtgtgcacagcgagaaccatccaatgaagctttgcacagaaacgcatctatacattgcatagtgccactgggtgctgctaaaaaagaggaattggctgctaggacttcattggtcctcctcgtgatgcagttactgggaaacctggaggaggattcatttaggagagtactgccctggtttttcccgttgctagttgatctgatccgttgtgagcatagctctggagaagttcaacatgcactgtacaaaatcttccaatcatcaataggccccatgctaacagtataa</cdnaseq>

Protein Sequence

<aaseq>SDAIVAFVKALCKVSMTELQSPTDPRIFCLTKIVEIAHYNVNRI RLVWSRIWKVLSEFFVSVGLLENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLR PFVIVMQKSNAPEVRELIVRCVSQMVLSRVNNIKSGWKGVFMVFTSAAADDTKSIVLL AFETMEKIVRDYFPYITETENTTFTDCVNCLIAFTSSQFNSDANLNAIAFLRFCAVKL ADEGFGCQEKCTDEPRNLGMSDGNATVDKDDSISLWIPLLAGLAKLTSDSRSTIKRSA VGVLFDILKDHGQLFSESFWTNILESVIYPLFSSERSSSNDPTSTPSIPEDDFSNLET QTLAVKCLVGLFINFFDVMRPELARVASIVTYFIRSPYKHSASIGVSALMRLIEGVGG ELSKEEWKDILLRFKESVAHTFLVFSKIVRMMQDIEIPDRFESYSENDQYSDHENYGN EEEEANMETTSYAIVKLKNHMALLLLVVQGIIKLYEEHRKYLSSDHINILLEMISAIA THASEVSSESSLLLKFHKACSLMEVSEPAIVHFENESYQTYLKLLQALFRDYPSMSEE MDIESQILRVCEKILRIYLQCAQREPSNEALHRNASIHCIVPLGAAKKEELAARTSLV LLVMQLLGNLEEDSFRRVLPWFFPLLVDLIRCEHSSGEVQHALYKIFQSSIGPMLTV</aaseq>

Gene Sequence

<dnaseqindica>2..111#217..538#628..973#1092..1750#2277..2885#cagtgatgccattgttgcttttgtgaaagctctttgcaaggtctcaatgactgagttgcagtctccaacggatcctcgtatcttctgccttacaaaaatagtagaaatcgcgtaagaatttcctagatccacttgtaaaacctacctttcactagcagatagtagctgtgacccagtacttgtcaactattctaattctgaactaaattcgtgcaggcattacaacgtgaaccgcatacgtttggtgtggtctcgaatttggaaagttctgtcagaattttttgtatctgttggactgctagaaaatctttctgttgcaatatttgtgatggattctctgaggcagctggcaatgaagtttctggaaagagaggaactggcaaactataacttccagaatgagttccttagacctttcgtgattgttatgcagaagagtaatgctccagaagtacgagagctgattgtccggtgtgtctcacagatggttctaagtcgtgtcaacaacataaaatctggctggaagggtgtttttatggtatgtattgcagcaacgtttctctcatgaaaagaagactaaaatatgcattattatggtgtttattgaattatttttgcactgtgcaggtatttacttctgctgcagctgatgatacaaaaagtattgtcctattggcatttgaaactatggaaaaaattgttcgagattactttccatacataactgagacggagaacaccacattcactgattgtgttaactgtcttattgcgtttacaagcagccaatttaatagtgatgctaatctcaatgctattgcgtttctccgattctgtgctgttaaacttgccgatgaaggatttggttgtcaggaaaagtgtactgatgaacccaggaatttaggcatgtcagatggaaatgccactgtggacaaggatgattctatttccttatggattcctctccttgcaggtgtggcaatcttttagtgttagttactatcatgcagtgtgaatcttgttggattaaaaaacgtaaggactggttcatttgtaagattattattttatatttccttttaacctttcaggtttagctaaattgactagtgattcaagatcaaccatcaagagaagtgctgtgggagtactttttgacattttgaaggatcatggacaactcttctcagagtccttttggaccaacatccttgaatctgttatttatcctctatttagcagtgaaaggtcttcatcaaatgatccgacctcaacaccgagtatccctgaggatgacttttcaaatcttgaaacccaaacattggcagtgaaatgtttagtgggtttgtttattaatttctttgatgtgatgcgtccagaacttgctagggttgcatctatagtcacatattttatccgaagtccctacaaacattctgctagcataggtgtatctgctttgatgcgcttaattgagggagttggtggtgaactttccaaggaggaatggaaagacatattgctgcgcttcaaggaatcggtggcacatacttttcttgtattctccaaaattgtgagaatgatgcaagatattgaaattcctgatagatttgaatcttattcagaaaatgatcagtactcagatcatgaaaattatggtaatgaagaagaggaagctaatatggagacaacttcttatgctattgtcaaactgaagaatcatatggctctgctcctcttagttgttcaggtacttttctctgttaaacaaattatcttgttaatccacccataacatgttaagtttgattaatggcactttttattcacgtcgactctgggcctaactctacaattgggaacctagtcctaggctgtttacttgccgtccaatactccaatgctctagtgactatgacctgaaaattttagtcgtcaattaaggcagtaacttttgaaagagcagagtggaataatgatgttattacgaaaagcaagggtgtgagaatcaaataatcaatcactacatatcttgaccttgcctagctacctctatggaacagtttggtttttacctaacggttatgccagttcttatggcaaagtagggttacgaagcatgttccttttctaggtgataattgggaatctcttgtcctttcctaggtggacaacaggacaagtgacccagatgtgccatttgctgtggcttctatttcgctctaacatttccagccacatcactgtatctctcagtcttttgcccttttttgcagggaataattaaattatatgaagaacacagaaaatatctgtcttccgatcatattaatattcttttggagatgatatcagctattgcgacacatgcaagtgaagtgagctctgaatcttccttgctgctgaagtttcataaagcatgttcccttatggaagtatctgagccagcaattgtccatttcgaaaatgagtcataccagacctacctcaagcttctgcaagcgctgtttcgtgactatccatccatgtcggaagaaatggacattgaatcacaaatacttcgtgtttgtgagaaaatacttcggatatatctacagtgtgcacagcgagaaccatccaatgaagctttgcacagaaacgcatctatacattgcatagtgccactgggtgctgctaaaaaagaggaattggctgctaggacttcattggtcctcctcgtgatgcagttactgggaaacctggaggaggattcatttaggagagtactgccctggtttttcccgttgctagttgatctgatccgttgtgagcatagctctggagaagttcaacatgcactgtacaaaatcttccaatcatcaataggccccatgctaacagtataatagcacatatttgttctgctaggtctacgattttgttactctattttgttcacgttattccagttaactaagggggcccaggactatctttcgacatccttgatttatcttatctgtttcgaaatcctggagttcaaggtaaaaattcattagttctgtgcacttgcatattatgctgtatgttataaattcaactgagatcaacctgcttatcttatattttgcagtttaatatgatcaatccagatacgtgagggaatagaatcgattttgccagcattcatttcaggcaatacgagactatcagtaaatgaacattgtagactgacatagaatttgccccttatggctggactctcttgagaccgatgatgtgttgaggtaatatttcgcaaccctataatgcggacataagatttacccgatgtgtggaggtaatatgttattgtcaaactgaaggacagcatgctcattgctcgcaaagccacaatccatcatgtatattactagttccatagtactttcaaccatgtgccgtggaaacacctgagctactagatgaattcgctctatgaaattctgtttttgtttttctttttgtaatagcttttgttgtgaaactaaagtagagctagactagccttgtacctaaaatgagcaatgttttgtatcgtattcctttgtttaatgcataatatagcgaaaagaatgttgttttggct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0622800, RefSeq:Os06g0622800