Difference between revisions of "Os06g0656500"
(Created page with "{{JaponicaGene|
GeneName = Os06g0656500|
Description = Similar to 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment)|
Ver...") |
|||
| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os06g0656500| | GeneName = Os06g0656500| | ||
Revision as of 20:27, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0656500 |
|---|---|
| Description |
Similar to 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1) (4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment) |
| Version |
NM_001064787.1 GI:115469305 GeneID:4341718 |
| Length |
6697 bp |
| Definition |
Oryza sativa Japonica Group Os06g0656500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:27820196..27826892 |
| Sequence Coding Region |
27820427..27820570,27820804..27820906,27820990..27821203,27824007..27824205,27825164..27825517 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:27820196..27826892 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:27820196..27826892 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggtccatggcggcggcggcggaggcggcgcaggaggaggagacggtggtgttccggtccaagctccccgacatcgagatccccagccacctcaccctgcaggcctactgcttcgagaagcttccggaggtggccgcccgcccctgcctcatcgacgggcagaccggggcggtgtacagctacggcgaggtggaggagctctcccggcgcgcggcggcggggctgcggcggctcggggtggggaagggcgacgtggtgatgagcctcctccgcaactgccccgagttcgccttcaccttcctcggcgccgccaggctgggcgcggccaccaccaccgccaacccgttctacaccccgcacgagatccaccgccaggcgtcggcggcgggcgccagggtgatcgtgaccgaggcgtgcgcggtggagaaggtgcgcgggttcgccgccgaccgcggcatccccgtggtcgccgtcgacggggacttcgacggctgcgtcgggttcggggaggcgatgctggacgcgtccatcgagccgctcgacgccgacgaggaggtccaccccgacgacgtcgtcgccctcccttactcctccggcaccaccggcttgcccaagggcgtcatgctcacccaccgcagcctcgtcaccagcgtcgcgcagcaggtggacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccgctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcgatcgtgatcatgcgcaagttcgacctgggcgcgctggtggacctgacgcggaggcacggcgtcaccgtcgcgccgttcgtgccgcccatcgtggtggagatcgccaagagcccccgcgtcaccgccgacgacctcgcctccatccgcatggttatgtccggcgccgcccccatggggaaggacctccaggacgccttcatggccaagatccccaacgccgtcctgggacaggggtatgggatgactgaggctggacctgtgctggccatgtgtctggccttcgcaaaggagccattcgaggtcaagtccggctcgtgcgggacagtcgtcagaaacgcggagctgaagatcgttgaccctgacaccggcgccacccttggccggaaccagtccggggagatttgcatccggggagaacaaatcatgaaaggttatctgaatgacccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatacaaggggttccaagtacctcctgcggaacttgaagctcttctcatcacacaccctgatatcaaggatgctgccgttgtaccgatgatagacgaaattgcgggtgaagtgccggttgcattcattgtacggattgaaggatctgcaatcagcgagaatgagatcaagcaatttgtggcaaaggaggttgttttctacaagaggctcaacaaagttttcttcgcggattcaattccgaagagtccttctggcaagattctcaggaaggacctcagagcaaagcttgcagccggcatccctaccaatgataatacacagttgaaaagctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MGSMAAAAEAAQEEETVVFRSKLPDIEIPSHLTLQAYCFEKLPE VAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFL GAARLGAATTTANPFYTPHEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVD GDFDGCVGFGEAMLDASIEPLDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTS VAQQVDGENPNLYFRREDVVLCLLPLFHIYSLNSVLLAGLRAGSAIVIMRKFDLGALV DLTRRHGVTVAPFVPPIVVEIAKSPRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIP NAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRN QSGEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIK YKGFQVPPAELEALLITHPDIKDAAVVPMIDEIAGEVPVAFIVRIEGSAISENEIKQF VAKEVVFYKRLNKVFFADSIPKSPSGKILRKDLRAKLAAGIPTNDNTQLKS</aaseq> |
| Gene Sequence |
<dnaseqindica>6323..6466#5987..6089#5690..5903#2688..2886#1376..1729#143..808#tattaacaaacgcttcgcctgcccccaattcctctctcttcctctcatcagtcaagagcggaagagctcgacacatctctccgatccccatttcgccttctgctccggtgagctccgatctgactgcgcgtggggggaatcgatggggtccatggcggcggcggcggaggcggcgcaggaggaggagacggtggtgttccggtccaagctccccgacatcgagatccccagccacctcaccctgcaggcctactgcttcgagaagcttccggaggtggccgcccgcccctgcctcatcgacgggcagaccggggcggtgtacagctacggcgaggtggaggagctctcccggcgcgcggcggcggggctgcggcggctcggggtggggaagggcgacgtggtgatgagcctcctccgcaactgccccgagttcgccttcaccttcctcggcgccgccaggctgggcgcggccaccaccaccgccaacccgttctacaccccgcacgagatccaccgccaggcgtcggcggcgggcgccagggtgatcgtgaccgaggcgtgcgcggtggagaaggtgcgcgggttcgccgccgaccgcggcatccccgtggtcgccgtcgacggggacttcgacggctgcgtcgggttcggggaggcgatgctggacgcgtccatcgagccgctcgacgccgacgaggaggtccaccccgacgacgtcgtcgccctcccttactcctccggcaccaccggcttgcccaagggcgtcatgctcacccaccgcagcctcgtcaccagcgtcgcgcagcaggtgagctctagctgctgcttcgccattgttaaccaatttttcttccgcggcgtcgaattttccggggatttctctcactttctgcgcttcggagtggcgtctcccctttccagcttgggatttccccttttttttatctcgtcttttttgtcggcgccaagcgagtgatcattcaattcactcctcctcatcaaaccccctgtcagccacatgggtcccacacatggtcccacctgtcagccacatatccccagctgcgtcaagattcgtgccggtgactggatggcgctgtccgttaatacatgcatcggaaaatgttaagaatatttcgtttcttttttttattattttttgaaagaaatatagttatatttgtagtttttatgtgctaaattattttttatcaaaactcaaacaaccatcttaatgcttattggtggttacatgagagatagttaaattcttgcttgatctaaatgatagtaaaataatctcttttttttttcaacctactagagagtaacttactagtactaataatgttgaaaattgtgaaatttggtgcaggtggacggggagaacccgaacctgtacttcaggagggaggacgtggtgctgtgcttgctgccgctgttccacatctactcgctcaactccgtgctgctggcggggctgcgagccgggtcggcgatcgtgatcatgcgcaagttcgacctgggcgcgctggtggacctgacgcggaggcacggcgtcaccgtcgcgccgttcgtgccgcccatcgtggtggagatcgccaagagcccccgcgtcaccgccgacgacctcgcctccatccgcatggttatgtccggcgccgcccccatggggaaggacctccaggacgccttcatggccaagatccccaacgccgtcctgggacaggtgatccgctcaaactaatatgcccttcacacactgatccattcaattcccttccccaattcctaaattatagcgtatgcttatttgtctctcttattaacacacaagaaataatatgtgagtagaactttgatatacgtatccttagttactcaaaaccaagtaaactatgataaaaaaaacccacaaaattaactttaaaattaagtttttaaaatttaaattttaacacataagtataagtattggcgaaaagataagattatatctcatgccgctttcagttgtgaatgccatgcaaatatgcgatgcaatgcgcgtcggcagtacagtacctgttggtacaaggcgatatatggaatcttggatggaatccagtggttgctatacatgctactagagcttaggattgcatattattgagagaaattttgatgagcagtaggtgggtggtagtgcgtcgaagcttttggctccttttgtggcgcgaaaggcagaggagaatcgttagtggccggctggttacttggggtgtgtggtaaggcgacgtctcaacagattggaagcgaaatgggcgaccccctttacgcatcgaggcctgtaggtggggtgtgtgtgtgttcgcgttccacgggcgctcgatcgccggccaggacaagtgtggtgaaaggtcggaagcacacgccaactccatgatttcggttgctgtctccttaagaaagcatttcggttaactaccttttgttgagatctctgggtggacaagcccccacacctgatggctgtgctgtgcagtgcgccccacccgttgtgttcgtttgtgtgtgatgtttcacctcactgcaatgttcacaatgcaccgtgggtgacactgacactgatgtgaaatttctgatccttaagtgactgaatcgctgagaaattcactgcatttcgtttttttttctttttctgacaggggtatgggatgactgaggctggacctgtgctggccatgtgtctggccttcgcaaaggagccattcgaggtcaagtccggctcgtgcgggacagtcgtcagaaacgcggagctgaagatcgttgaccctgacaccggcgccacccttggccggaaccagtccggggagatttgcatccggggagaacaaatcatgaaaggtagtatatcactttctttttttcctcttcatataatcattggtatcatctcggcgaaatcaatcattcatcatcttccccgtgtttatgggcacgctagtgcgtgtactactacttaattcagggccgttgctttggagcgtcactagccgttaattaagtcagtcacctaagagtgtgggtttaggtttgtagtgttatgacctgatgacatcattatcacaccttttttttggcttaattacttataggataggaacgagcaggtacaatagcagactattagccagctataaatatattttaatgaaataaaagatgagagaagagcagcgggctatagatctgtagccagctgcagcacagattccaagacgcaatgtgtgaatgacaggtgggaccatatattaatagtatagtaagcaattattgtatgaattggctattagattggctatagatgaattggagctagcagtaggctatactattaaacttgctctaatgcgatgaaccttgttcactagtcgtgaccaataaaaatttctttgcctttgcttataggcctaggtagcatcgaaatatcgttttctttatatagtctggttccaattccatgattccatcacacaattattggtctcttttctcccaaataactgttcatagacatcgtttaacttcctggaattgcatattctccagtactttgagaataggaacgccttgtcatcagtacatgtgtccttttctgttggaactgtactgttacagtggctctaccttagtttctgtagcaaagaatagactaatctaacgtttcatgtagtagttgccaccaattttttttctccctttcgcaaagccgccctctgttgctgtagttgaatgcagtttggttgctcctcctcctacatcctaactactaccacgtattcccttccaagacacgattagcaagcgggagctagcaaagcacatggttgttggtatccagctgatatgcaggcacgttggtagcaaatcatcctcagttcgcgggacagctctcatcatgcaggcaaccactacaatgttcgcaagtagaagctgaatcagcaagggaactcttaacccttttgatgagattgagatggcaagaagctaccgttatcctgcaacacatcttgaccaatgctatcactattacacctaacttggaaccacatagcaaccttgtctggttctcaccttcctgagcctatctcttgattgcttgtgtggagaaagggtgagcacctatcctgacctgcttatgtcatagtcaaaggttgctacctgcttggacgtatgtatgcaaggtgtaacaatattatatgattctaatatggtagatctagtaatatactagtactagattaaaaggcaatttgtggcacatatccatccttgggtgctgaaaaatttcctagttgctatttatatttctttagtaatcgaaagctgtacctctcagctgttaccaatagtgcgccctgcacaaacaagtttctactctccgatatatggcagtcaaccatgtttacactttacagtgctaggagtagaaatactagacaaataaaaacttcaagtgtcaccatactaaactgaactctggcacacgatccaaattttggatcagaaagctactcttatctgtgatttcggatctttgtggggggagtaagttcagatctctgattgcgtgcaaccatattcaataggaattccagaagtgcgaccatgagttaacagagaatcgaggttggcatattctagatggtccatccatccttcatagcttgcatttattgattaatcacacattcaagctgcccatgtgagagcattttccaaagggatctacgaaagtctcagcttacactagtactccaatccagaacactgtatttccatgtagtcctcaaactcctcattagcttaagttggatgtaccattattttctatttggaaaaaaacgattaacacaacaaaaggaaaaggaaaaacttttcatttttgacaagtttaattgatacggagtacaacactatcagttttttagagccactatgcaactggacactaattatttttccgttagcgaattgtgttcctccgcgtcagcggtatgcattgaatctatatcatggctacaggctgttctatactcactacccatgtgcactttaccacttgggtaggaatctccacagttatcatttctgttcatttatttcaacatctcttctttgcacattgaaatggctcccttttgtcctttcaatggaggaagtgctggtttgtccttcaaatttttttggaaaagatatctgtcctatttcaaagctataaataatctacattacgattatgaatagactagtatagcgaagcactaggagatgaatactatggtgctttcggcgccagctgtctgaatgtgacctgaggagagatatttctaagaattatccaacaattcatggcaagataaatgcccggaaatagttcatggtggttagtctagtttgcgaccttatcaacaggttagcatatggctatcaaattttaaacctgaagttgaccatcgctaacacacagtagtgtttccatcgaaaaatttatctacttagactcttttttttttatcttactgaaaactgtaatggagactgcactggtatatgctctggcttatacgagtgaacaagtgcacatgaatgtctgaaactctgaatgcagccatttcatgccagtgatcgtgcctgtgatttgcaggttatctgaatgacccggagtccacgaagaacaccatcgacaagggcggttggctgcacacaggagacattggttatgttgacgacgacgacgagattttcattgttgaccggctcaaggaaataataaaatacaaggggttccaagtacctcctgcggaacttgaagctcttctcatcacacaccctgatatcaaggatgctgccgttgtaccgtaagttgatccatgcttagatgaacagaaggtcagcatgttccatcacatcagaggactaaattcttattgaattcttgcaggatgatagacgaaattgcgggtgaagtgccggttgcattcattgtacggattgaaggatctgcaatcagcgagaatgagatcaagcaatttgtggcaaaggaggtaatgcttagtttatcaatctctccatctaccgctttatggttcacatacaagtaatcactagtctatagaagccatcatatattcatttatgcttagaaaacagtactctctaacaagttaaagctaaatcatacatcatgcagaagcatagaaataattggattggtccatataccaatgtttcaccgttataagcatcataatccagattgttttgaacaacatcacaggttgttttctacaagaggctcaacaaagttttcttcgcggattcaattccgaagagtccttctggcaagattctcaggaaggacctcagagcaaagcttgcagccggcatccctaccaatgataatacacagttgaaaagctaaatctgataatattttttcctctttatacaccagtttcaaaaatcatgtaatattctttatgaaatggcagaaatacgtatagaagggccatatggttcaattcttttagatggctaagttatactttgtttgtatgcccgttatgtgtaccgtgtcatgtatagataccttttttttttctttttgaattttgacaacaaggctgattataatgtataccacgtttcaatt</dnaseqindica> |
| External Link(s) |
