Difference between revisions of "Os06g0658500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0658500| Description = Conserved hypothetical protein| Version = NM_001064793.1 GI:115469317 GeneID:4341725| Length = 5422 bp| Definition ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0658500|
 
GeneName = Os06g0658500|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0658500

Description

Conserved hypothetical protein

Version

NM_001064793.1 GI:115469317 GeneID:4341725

Length

5422 bp

Definition

Oryza sativa Japonica Group Os06g0658500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27945988..27951409

Sequence Coding Region

27946057..27946282,27947757..27947806,27947962..27948074,27948182..27948461,27949012..27949147
,27949314..27949489,27949588..27949684,27949776..27949845,27950637..27950934

Expression

GEO Profiles:Os06g0658500

Genome Context

<gbrowseImage1> name=NC_008399:27945988..27951409 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27945988..27951409 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcacccgccgcgggcggcgcgtctccggcgccggaggctcctccgcccccgccgagggggtggatctccggcctcgtctccggagccggccggatcctcgcctccgtgctaggtcccgactcgcctgccgccgcctccggctccgccacgacgacctcagccacgtcgccgtccgcgtcctcctccccggcgtcgtccaggcatcccggttatattcgagatcatggtaattccccactattttttccgaaagctaataagttaaacaagagtgaaaatgaagcaattatgaaagattattctgaggcatcactagcaattatctcagagattgagccgaaggatgccataatgcagttacttaagcaggagacttattcaaggtctgaatgcaatgcactagtaaagataattcaagagcgggttgtggactcaaatttaaatggagttgatgctggtgggcttgctcttccaatcaattggaagactggcagacaagcaaatattggatattcttcattgagtccaaaaggattgttgcctgcaacttcaattcctccagtccaggaccatgtttttgataatagtgctggtgccggtgcatctacaacaatagctcatgataggggtcctttcgcccacgctactgataagattcaatccgtactcaaaagaagttgctctgttgcaacggatacccctgaccctgaggactcccgaagagtcaggccaaaaattaatggaaattcattagaaatttcaaattttaagcaagtcgatgttattcgaactcattcaggagatgacaataaattatcagatgttcccctttttgggaccaacaatttaatatattctaatattgtttcaattgttgggagtgccgatgaaaaaataggcatacctaacaaaccttcagctggtgatggcaataaaaactatgattctgaatttttaaatccatgtaccaataaggatctgaagaacagctttccattgaaggtggaacctttggatgtttgtattcctttcgagcagcagatgatggatctctcacaccagaagcatgagcatgctgcatgtgatgattattgttctgtctcaaaattaatgtttaaggaggatattgagactgcactcagcatgccagtgggcgtgccgctagaaaatggttctaagaaccggagacgaagggcacccaacacgcagaggattaccccggcaaggtctcctgccaagggttcacgtcgcaagagtaatgatgtcacagtaaaatcagagaccgacttgctagagcaaagcaagggttcacatgatgtcacagtaaagtcagagatcgacttgctagagcaaagtaaattggcactgatggagcagtcaccagatttaggcgatattccggtgaagagaccagttgggaggccaaggaaggcaaaatga</cdnaseq>

Protein Sequence

<aaseq>MESPAAGGASPAPEAPPPPPRGWISGLVSGAGRILASVLGPDSP AAASGSATTTSATSPSASSSPASSRHPGYIRDHGNSPLFFPKANKLNKSENEAIMKDY SEASLAIISEIEPKDAIMQLLKQETYSRSECNALVKIIQERVVDSNLNGVDAGGLALP INWKTGRQANIGYSSLSPKGLLPATSIPPVQDHVFDNSAGAGASTTIAHDRGPFAHAT DKIQSVLKRSCSVATDTPDPEDSRRVRPKINGNSLEISNFKQVDVIRTHSGDDNKLSD VPLFGTNNLIYSNIVSIVGSADEKIGIPNKPSAGDGNKNYDSEFLNPCTNKDLKNSFP LKVEPLDVCIPFEQQMMDLSHQKHEHAACDDYCSVSKLMFKEDIETALSMPVGVPLEN GSKNRRRRAPNTQRITPARSPAKGSRRKSNDVTVKSETDLLEQSKGSHDVTVKSEIDL LEQSKLALMEQSPDLGDIPVKRPVGRPRKAK</aaseq>

Gene Sequence

<dnaseqindica>70..295#1770..1819#1975..2087#2195..2474#3025..3160#3327..3502#3601..3697#3789..3858#4650..4947#gatttctcctcccctcccctcccctccccttcccaccgcctccgcccttcgtcgtcgtcgtcgtcgcgcatggagtcacccgccgcgggcggcgcgtctccggcgccggaggctcctccgcccccgccgagggggtggatctccggcctcgtctccggagccggccggatcctcgcctccgtgctaggtcccgactcgcctgccgccgcctccggctccgccacgacgacctcagccacgtcgccgtccgcgtcctcctccccggcgtcgtccaggcatcccggttatattcgaggtagaagtgttgtgtgtgtgtgtgttcgtaatcgtccatgctttgctagccatttcaggagttggatgcgggccttcatttgcttgtggaatcctagctagcttggccgcttgaattaacttattagggccgctcatgggaaacgttacaatgggattctcgcttttgcggtttgagtgcatggaactgtgaatagaatcgaaatttcaacacctagcagtttcatactgaaaaactagccaaatacctgtgtagtatttccgaaaataataaaattaaataattactgaaaaaaggtattattttcagttggttcaaacaagatcattcattttaccatgcttagaaaattaaagagctgcaacctacgcaacctacatagtactaagagcaaacagaacattgatggctcacatgtcacatgtcagtcttttaataatagtataaaaaagggcataaatatgcttgtttctgtgtgttttgtttgttgagctcatgctattatgtcgtgcatagtcatgtcaatggcaatgtcgctgtcattgttgcacacaaaagtcaatccaggttcagtactgtactagtaaaatgcgttgggtcgtgggcttgagtgcattggcactaagcgactaactaggtgaaaatgcctatttgttgcctttttattcatatagtttcctgtaattcacctattaaccctttattttggctgcatttggttcgtggagacccttgattactcacctacaactttgatcctgaaatgtcatagtccaaaatattttatagccttgaagctttgtatttttataatccaaagttgataagcgaggagatcatgaaggcatgtatgtatatgaccctatcttttaaaagtaagaccgagttttctagcttgtctaacaaacagccagccagactggaacctgttagtgacttcagtgattggtcaattagtttgcgtttgaacttggaggctatctcaaacttgtaagttcaatcatcatcacctttctcctaatgctagatgcaggaactgtttatacttccctgcaaaaaagacacggctgctagtctttcattctgtagcatgacaattgtgtgtttttctagtatacaaaacatgcagttttcttaatagtccaaaacaagggtgattccaaaatcatggtaatatctggaattagtctaaatctgtggtgaaaagatggtttttttatgcctattactccatatctcgtttctactatttacaacactttgatcacgttatctttctcatgtgcatttttttgtattttatgaatttgggtgaatttcttgactatgatgtttcattgttcgtgctcgagccagttctttcttttcttttaaagggctgtacctttttgcattttgcatagatactgccatactaaaaaaatgatttctctgttatgtatccctgtgctgattcttttcttttcgctcacagatcatggtaattccccactattttttccgaaagctaataagttaaacaaggtattctcgcttcttggctttcctgtttgttatttgaaaaattgcataccttctttttctaaacaaacacttgctgggtttaggagtgcgtccttatctattgaggacttctgagactaaagttgtacatctttttttgcctgatatgatgtcagagtgaaaatgaagcaattatgaaagattattctgaggcatcactagcaattatctcagagattgagccgaaggatgccataatgcagttacttaagcaggagacttattcaaggtatccatgtagtacatcttgtttccttccattatattcttctagttctatacaatattgtttaatttacatacctatttctgattttaccgaactattccacttaggtctgaatgcaatgcactagtaaagataattcaagagcgggttgtggactcaaatttaaatggagttgatgctggtgggcttgctcttccaatcaattggaagactggcagacaagcaaatattggatattcttcattgagtccaaaaggattgttgcctgcaacttcaattcctccagtccaggaccatgtttttgataatagtgctggtgccggtgcatctacaacaatagctcatgataggggtcctttcgcccacgctactgataagattcaatccgtgagtgctctttgcttataattttagtttgtactgatataaggtaactcgaacagtcaagccacaatacatggctatatttgcaaaagtgcaaagtgaaaccctaataatcagttcgacataaagcatccaaaatattaaaattgtctttcaatcagatgaatgatgaccaataatcttacttatccctcatcatttaacttatattcatgggaaaatagaaatgatgtatattgtttgtacttgagtgctgttagactgccatagcactatagcaatatagtggatttgtacatttgcagtggatctctagccttctacgcaatgcaactggtaatgtaacagccgaaagtcctatttgctataggatgcaatacgaattaatgagtacgttgactctggtatctttgcttgcaattatatggaagaaagtgtaggtcaatagttctcttttgaatctttacaaccatctaatttactgattttctttgtttctcctttgtatcatactctgcagtgatagaatttctctctgcacatttaactgcaggtactcaaaagaagttgctctgttgcaacggatacccctgaccctgaggactcccgaagagtcaggccaaaaattaatggaaattcattagaaatttcaaattttaagcaagtcgatgttattcgaactcattcaggtaggaattacaaaattacttaaacgtttctttgggagggggaatttgtttccctttatacaatttgtttgagattcacattttcatgcatatttttcttacccagattcaaattcatgtgaaaacctcatcgccaagaatcataattcatttggttgcttttcaggagatgacaataaattatcagatgttcccctttttgggaccaacaatttaatatattctaatattgtttcaattgttgggagtgccgatgaaaaaataggcatacctaacaaaccttcagctggtgatggcaataaaaactatgattctgaatttttaaatccatgtaccaataaggtaaagtgtccagtcacatctcaaacatgatatatttttcgtctgtcttgtttcgtcagtcatatcacaaacgaagttaacgctaatctctaccataggatctgaagaacagctttccattgaaggtggaacctttggatgtttgtattcctttcgagcagcagatgatggatctctcacaccagaagcatgagcgtatgttgtcatctttggaattgctatatttctcttactgccatgaaatgataacttaatatcttctgagtttgttggttgccttgaacagatgctgcatgtgatgattattgttctgtctcaaaattaatgtttaaggaggatattgagactgcactcaggtaccccacgtcgcctgttccattattctgtatgtgtgaatttaggccctgtttagatttcctagcaaaatttttcactctgtcacatcgaatgtttgaacacctgcatggagtattaaatataaacgaaaaaaataactaattacatagattgtgtataaattgcgagatgaatattttaagcctaattgctccatgatctgacaatgtggtgctacagtaaatatttgctaatgacggattaattaggcttaataaattcgtctcgcagtttacatgcggattctgtaatttgttttgttattagtctacgtttaatatttcaaatgtgtgtccgtatatccgatgcgacacgttaaaactttacacccctggatctaaacacagccttatttgggagtgttctctacttttagagcttgaaatgtttgagtcgctctagatcagtccttttttaagattgaaatgtcacgacatcttaatgatggctgttgcaacgttatgcacacatatataggacaacattgccacttacgatcattgttgccactgtcatgacaatgcaagaagattatgtctgtggaacacactggcctcctcaaggttgcctgcctaagttcctatcattgatcacttcatgttgaacaagtaaaatgcatgttataaaagataaaaaaaaatgcatgttataatgaatgatcgtagcacaaactactcctattttaggtcagtggagtaatattagtatctttcacctcgaaaaaaaaaggtaatattagtatctatttcagcatgccagtgggcgtgccgctagaaaatggttctaagaaccggagacgaagggcacccaacacgcagaggattaccccggcaaggtctcctgccaagggttcacgtcgcaagagtaatgatgtcacagtaaaatcagagaccgacttgctagagcaaagcaagggttcacatgatgtcacagtaaagtcagagatcgacttgctagagcaaagtaaattggcactgatggagcagtcaccagatttaggcgatattccggtgaagagaccagttgggaggccaaggaaggcaaaatgaatgctagacaaatttgatgtcctcaaatctgtccatggtcttatgtatatcatctctgaagaacctgaaaagtcacaatctctgaaggacattgcagccttcactcttgtacagatgtctgttccatctgacatgtgtatcaagtattagacagaaggaaagggaaacattgccatgtacccagtagtctaacttatgtctgttaattggtaaatgtagtaatgtactcaacatgtaggtgtagtgcatgtcacaaacttcatttgatgcatttctggctcttgcactcctgctgtctatgtgtaaagttctgatattcagggtacgtttgacaaagctccggatcttgtctggatcagaagtttgtaagttaaatcgaagtgatttaaaattgtacatttcatttagaataggaaccgaattattcattcaattgttactgacataatccctaattcaaatcatggatttctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0658500, RefSeq:Os06g0658500