Difference between revisions of "Os06g0661800"

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(Created page with "{{JaponicaGene| GeneName = Os06g0661800| Description = Similar to Cryptochrome dash (Fragment)| Version = NM_001064813.1 GI:115469357 GeneID:4341749| Length = 3319 bp| De...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0661800|
 
GeneName = Os06g0661800|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0661800

Description

Similar to Cryptochrome dash (Fragment)

Version

NM_001064813.1 GI:115469357 GeneID:4341749

Length

3319 bp

Definition

Oryza sativa Japonica Group Os06g0661800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28152529..28155847

Sequence Coding Region

28152594..28152797,28153000..28153049,28153200..28153323,28153430..28153499,28153592..28153667
,28153840..28153916,28154126..28154172,28154243..28154430,28154563..28154707
,28154792..28155010,28155168..28155307,28155445..28155748

Expression

GEO Profiles:Os06g0661800

Genome Context

<gbrowseImage1> name=NC_008399:28152529..28155847 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28152529..28155847 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcctcgtcgtcgtcgtcgtcgcggggcgcgctggcggcggcggcggtgccttccctctccgccgacgaggccggcgcggcggcggacgaggcgttcttgaggtacacctcgccgagcatgcggcggagcggcggcggcggggttgccatcgtgtggttcaggaacgacctccgggtgctcgacaacgaggcggtggtgcgcgcgtgggccgcctccgatgccgtcctccccgtctactgcgtcgatccccggatctccgcggggagcacccactacttcggtttccccaagactggagcattgagggcgcaattcctgatagagtgcttggaggatttgaagcgcaacctgacgaaacaaggtctcgacctgctcatccgccatgggaaacctgaagacatcctcccttcaattgcaaaggctgtcactgcacatacggtctatgctcataaggaaacctgcagcgaggaactcctggttgaacaccttgtgcgcaaaggcttggagcaagttgtgattcctcagggaggagcatctaaccagaagaagcctcgaaatcccaagttgcagctcatctggggagcgacattgtaccatgtcgatgatcttccattctccgtgaacaatttgcctgacgtatatacacagttcagaaaggctgttgaatctaagtcctcagttcggaattgtagcaagttgccaccgtcactcgggccgcctcctggttctggcctggatgaaattggaggttggggaacagtaccaacactggagtcactaggcctaagcatgacaaaggcagagaagggaatgcatttcgtgggaggggagagtgcagctctgggaagagttcatgagtacttctggaagaaagaccagctgaaagtctacaaagagaccaggaatggcatgctaggtccagactactccaccaagttctccccttggcttgcttctggcagtctttcgcctcgttatatttgtgaagaggtaaagagatatgagaagcagagaatagcaaatgattctacatactgggttttatttgagttgatatggagagattacttccggttcatatcagcaaaatatgggaactccatttttcacctagggggtccaaggaacgtagagtccaagtggagccaggatcaggcactgtttgaatcttggagagatggtcgaactgggtaccctcttattgacgccaacatgaaggagcttttagcgacaggtttcatgtccaaccgtggccgtcagattgtctgctcatttctggtccgagatatgggtattgattggcgaatgggagctgaatggtttgaaacatgcctattggattatgacccagcttcaaattatggtaattggacatatggagcaggagttggcaatgatccaagagaagaccgatacttcagtatacctaagcaagccaagacatatgatcctgatggagagtatgttgcctactggttgccagagctccgatcaattgcaaaggaaagaaggaatttcccaggagcttcatacatcaagcaggttgtcccactgaaatttgatggtggacatcagaagagagatcagcagttcaacaggcagagaaggccaggccacatgtatagaagacaaaaataa</cdnaseq>

Protein Sequence

<aaseq>MSSSSSSSSRGALAAAAVPSLSADEAGAAADEAFLRYTSPSMRR SGGGGVAIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGA LRAQFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEEL LVEHLVRKGLEQVVIPQGGASNQKKPRNPKLQLIWGATLYHVDDLPFSVNNLPDVYTQ FRKAVESKSSVRNCSKLPPSLGPPPGSGLDEIGGWGTVPTLESLGLSMTKAEKGMHFV GGESAALGRVHEYFWKKDQLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRYICEEVK RYEKQRIANDSTYWVLFELIWRDYFRFISAKYGNSIFHLGGPRNVESKWSQDQALFES WRDGRTGYPLIDANMKELLATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDY DPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPDGEYVAYWLPELRSIAKERRNF PGASYIKQVVPLKFDGGHQKRDQQFNRQRRPGHMYRRQK</aaseq>

Gene Sequence

<dnaseqindica>3051..3254#2799..2848#2525..2648#2349..2418#2181..2256#1932..2008#1676..1722#1418..1605#1141..1285#838..1056#541..680#100..403#cacttcctctcctcttcctcccctctcaatccccaattcctcctcctcccgaggcaatccgcgaggctgcgcgtcctcctatccatcccggtctccgccatgagctcctcgtcgtcgtcgtcgtcgcggggcgcgctggcggcggcggcggtgccttccctctccgccgacgaggccggcgcggcggcggacgaggcgttcttgaggtacacctcgccgagcatgcggcggagcggcggcggcggggttgccatcgtgtggttcaggaacgacctccgggtgctcgacaacgaggcggtggtgcgcgcgtgggccgcctccgatgccgtcctccccgtctactgcgtcgatccccggatctccgcggggagcacccactacttcggtttccccaagactggaggtgaaagaattgggcgtcaatctctgactgaaattcagtttgcttcgtgcagattacttttatgttttggtgtgattttggctgcatgttcgttgggttcatgagggaaacgcgttgatttgattcgtttctttcagcattgagggcgcaattcctgatagagtgcttggaggatttgaagcgcaacctgacgaaacaaggtctcgacctgctcatccgccatgggaaacctgaagacatcctcccttcaattgcaaaggctgtcactgcacatacggtgagttcatccgcctaatcgtgcccgcgacgaattctagtagatttcgatgtgggaattttgggccttggagacttggaattctgaattcaggaggaggtttaaggcagtaatttgtggtgtatctccaggtcagtaatttgtggtgtatctccaggtctatgctcataaggaaacctgcagcgaggaactcctggttgaacaccttgtgcgcaaaggcttggagcaagttgtgattcctcagggaggagcatctaaccagaagaagcctcgaaatcccaagttgcagctcatctggggagcgacattgtaccatgtcgatgatcttccattctccgtgaacaatttgcctgacgtatatacacagttcagaaaggtatattctcataaagtttcttcatctaggttgtccattgttttattggcatgatagttactgtcaataaaatgtttttaccaggctgttgaatctaagtcctcagttcggaattgtagcaagttgccaccgtcactcgggccgcctcctggttctggcctggatgaaattggaggttggggaacagtaccaacactggagtcactaggcctaagcatgacaaaggcaggttcagtgatttcagttaactgtgttgagctaattttcagtgatcaactgtactttgccactttggcagataagctttgagaacttcacctataagttgtaactgtcactgtttgcttctctctatagtcagagaagggaatgcatttcgtgggaggggagagtgcagctctgggaagagttcatgagtacttctggaagaaagaccagctgaaagtctacaaagagaccaggaatggcatgctaggtccagactactccaccaagttctccccttggcttgcttctggcagtctttcgcctcgttatatttgtgaagaggtaataaattcatggtaacctctggagatcagtagctttgtctcatgctgtatttttggccatggtgcaggtaaagagatatgagaagcagagaatagcaaatgattctacatactggtatgccttctccagagttttatcacttctaaactctggtttttcagctctcgtttattatactatttgagaaatgagagttattacatatgctataaagtttgtaaggagtgtgaaatatttatagattattgcaattaagggtttccaacttccttagaagtcaatggtgaaactgaaatactttcttgatatgacaatgttttcagggttttatttgagttgatatggagagattacttccggttcatatcagcaaaatatgggaactccatttttcacctaggtaaagatataactctctctctcatgtccctagataatgcatgaaaaagaagtatcactctgaaattcacttttattgtttatcctgaaaatacacagttatttcagctaaatatatgtagaatagttagatttggctggaaaaaggtataatcctctttaaactactgtagggggtccaaggaacgtagagtccaagtggagccaggatcaggcactgtttgaatcttggagagatggtcgaactgggtatggagtactccaaattgttctaaaattttctcagtttaactcataattcatcatgtaaacctgctgaatctgttgatggtgactttcaggtaccctcttattgacgccaacatgaaggagcttttagcgacaggtttcatgtccaaccgtggccgtcaggtaaccattggcatcttatcacataagcagaaatgcagaatgactgcccaagggtacacccaaggccatctgatccaagtatccatctctcattgcttctctacagattgtctgctcatttctggtccgagatatgggtattgattggcgaatgggagctgaatggtttgaaacatgcctattggattatgacccagcttcaaattatggtaattggacatatggagcaggttagtgtttctttcctcatatacagttacttattcttgaaagcattgtataatcattagtcaaagcaaacaaatgacacaaaagtgggagctcatttacatatcatgccagactctgagactgaactgctactactgtaatcttgacaggagttggcaatgatccaagagaagaccgatacttcagtatacctaagcaagtaagccccaaaactaaatattggactctttcttaccagagttaacacttaaaaaggaatcgttctatactactagaaagaatcatagctagagttctaatctactagcaagtgacacggcaagaagaaataataagtttttaggcaccattctcacctcgacattttctgaccatgagtgaaactgtacattcttctgcaggccaagacatatgatcctgatggagagtatgttgcctactggttgccagagctccgatcaattgcaaaggaaagaaggaatttcccaggagcttcatacatcaagcaggttgtcccactgaaatttgatggtggacatcagaagagagatcagcagttcaacaggcagagaaggccaggccacatgtatagaagacaaaaataataagatgcatatatgtatttattataatttacaccatatatcaatacgaagtgaagcagatttac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0661800, RefSeq:Os06g0661800