Difference between revisions of "Os06g0677800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0677800| Description = Similar to P-167-1_1 (Fragment)| Version = NM_001064895.1 GI:115469521 GeneID:4341841| Length = 6039 bp| Definition...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0677800|
 
GeneName = Os06g0677800|

Revision as of 20:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0677800

Description

Similar to P-167-1_1 (Fragment)

Version

NM_001064895.1 GI:115469521 GeneID:4341841

Length

6039 bp

Definition

Oryza sativa Japonica Group Os06g0677800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29035521..29041559

Sequence Coding Region

29035796..29035988,29036069..29036259,29036562..29037754,29037861..29038008,29038189..29038264
,29038351..29038473,29038541..29038705,29038824..29038914,29039235..29039319
,29039400..29039555,29039647..29039703,29039793..29039891,29040036..29040154
,29040800..29040857

Expression

GEO Profiles:Os06g0677800

Genome Context

<gbrowseImage1> name=NC_008399:29035521..29041559 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29035521..29041559 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggctttcgtcgtcgtccggcagcgtcctcccggctcaggcggcgtcgccggaagctgtagaagaacaaaaatgcctgaattcggagctctggcatgcgtgtgccggtccccttgtttcgttgcctgcagtgggtagccgagtggtttatttcccacagggtcacagcgaacaggtagctgcatcaacaaataaagaaatggagtctcagatccccaattatcctaacttgcctccacaacttatttgccaacttcacaatgtgacgatgcatgcagatgcagaaacagatgaggtttacgctcagatgacgctacaaccacttagcccgcaagagctcaaggacccatatctaccagctgaattaggttctgccaacaaacagccaacgaattatttttgcaaaacattaacggcaagtgacacaagtacgcatggcggattctctgttccccgtcgagcagctgagaaagtgttccctccgctggattttactcagcagcctccagcacaggagttaattgcaaaagatcttcatggcaatgagtggaagtttcgtcatatctttcgtggtcagccaaagcgacaccttctaactacaggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatttatctggaatgacaacaaccagcttcttctgggaattcgtcgagctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatattggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttataacccaagagcaagcccttcagagtttgttatcccactttctaaatatgttaaggctgtatatcatacccgtatatctgtgggcatgcgtttcaggatgctttttgagacagaagagtcaagtgtacggagatacatgggcacgataacaggaattagtgatcttgatgctgctcgttggccaaactcacattggcgttctgtaaaggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggagattgagcccttgacaactttcccaatgtacccatctccttttccactcagactgaagcgtccatggccaacaggcttgccttcattacatggtggtaaggatgacgacttgacttcttctctcatgtggctccgagacagcgcaaatcctggtttccaatcattgaatttcgggggtctcggtatgaatccttggatgcagccaaggtttgatgcttccttacttggtctgcaacctgacatgtatcaaacgatagctgcgactgctttccaggacccaacaaagcaggtctctcccacgatattgcagttccagcagccgcagaacataggtggcagagctaatacacttctgccaagtcagattttgcagcaagtgcagcctcagtttcagcagcagcaatacctccaaaacatcaacgagaccacaatccaagggcatgctcagtctgagttccttcagcagcagctccaacgctgccagtcgtttactgagcagaagccacagctgcaaacccagcaacaacagcaagaatcacagcaacaacagcagcagcaatcgcagtgtatgcaagtcccacaacatcagcaaatgcaacagcagaagaacatgaccaactatcagtctgtacctaatgcattgtcaccgttttctcaactctcctctccttctcagtcttcacctatgacactgcaaacagtattaccattctcccagccacagagctatccagacacgagtatgagctcattgtcaccatccaacacatccaccatgcataatgcattgaggccattttcatcggaagcaccttcgcacctaagcatgccaagaccgactgcagtacctgtccctgacccatggtcatcgaagcgagttgcagtggagtctttgcttccctctcgtcctcaggttacatcgcagatggagcagttggactcaacagcacctagtataccacaaagctctgcgttggcgccgcttcctggaagaggatgcttggtggatcaagatgggaactctgatcctcaaaaccatctgttatttggcgttaacatagattcacagtcacttctaatgcaaggtggcatcccaagcctccagggtgagaatgattcgacggcaattccttattccacctccaatttcctgagcccgtcgcagaatgatttccccttggatcaaacactaagtagtgcagactgcttagatgaatcaggatatgtgccgtgttcacagaattctgatcaagtgattaatcgaccacctgcgacctttgtgaaggtttacaaatcgggaacctatggaaggtcacttgatatcactagatttagtagctatcatgaacttcgtagagaactagggcgcctatttggccttgagggccagttggaaaaccctttgagatcaggctggcagcttgtattcgtcgaccgagaggatgatgtcctcctcgttggcgacgacccttggcaggaattcgtgaatagcgtctcctgcataaagatactttcaccacaggaggtgcagcagatgggcaagccctttgagcttttgagctcggctcccggaaagaggctaggtagcagctgtgatgactatgtgagcaggcaggaatcaagaagcctgagcacaggaattgcatctgtcggctcagttgaattctga</cdnaseq>

Protein Sequence

<aaseq>MRLSSSSGSVLPAQAASPEAVEEQKCLNSELWHACAGPLVSLPA VGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYA QMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVF PPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV LFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNP RASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARW PNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSLH GGKDDDLTSSLMWLRDSANPGFQSLNFGGLGMNPWMQPRFDASLLGLQPDMYQTIAAT AFQDPTKQVSPTILQFQQPQNIGGRANTLLPSQILQQVQPQFQQQQYLQNINETTIQG HAQSEFLQQQLQRCQSFTEQKPQLQTQQQQQESQQQQQQQSQCMQVPQHQQMQQQKNM TNYQSVPNALSPFSQLSSPSQSSPMTLQTVLPFSQPQSYPDTSMSSLSPSNTSTMHNA LRPFSSEAPSHLSMPRPTAVPVPDPWSSKRVAVESLLPSRPQVTSQMEQLDSTAPSIP QSSALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSLLMQGGIPSLQGENDSTAIPY STSNFLSPSQNDFPLDQTLSSADCLDESGYVPCSQNSDQVINRPPATFVKVYKSGTYG RSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEF VNSVSCIKILSPQEVQQMGKPFELLSSAPGKRLGSSCDDYVSRQESRSLSTGIASVGS VEF</aaseq>

Gene Sequence

<dnaseqindica>5572..5764#5301..5491#3806..4998#3552..3699#3296..3371#3087..3209#2855..3019#2646..2736#2241..2325#2005..2160#1857..1913#1669..1767#1406..1524#703..760#aggaagctgcaagaggaactgaggaaggaagcaagaaagcaaaccaaaccaaaccaaaccaagaagcaaatctcagttgcaactcttgagctcagaagaagttgcaacagaagaaggagggagaagggaagcatctcagctagctaggcaggaagcatgctcctagcctccctctccggctgcggcggcggcggcggcggtcggatctgccggagagcggcggccggggagcccagagctgagagctaaccgtgcagacctcgcggccgcgagatctgaccacgcgactcctcggatcaagcggtgtcgcctcccgcagcagcatttccccccccccccccccccccgaagatcacagcctttttttccactggttcttgctggtcttggaagtggggaaaaaaaattctcatcacctcgtcgatggagaagcttacgacgcttgctcggtagatttgatttttctttttcttcttcttccgggggaagcgtaattgcgaaacagcgaaagaagaagtgttggtgagttggcgaaactgagaaagcgatggtttttgggaaggcgctgtgatttggcctaaaaaggaggaatctttccttcgttctctccttccttccccagcttcgtgcacgctcttatattgcatttcagatcggtcttgtgattggtcttttggagagagagagagagagagaagaaaaatgaggctttcgtcgtcgtccggcagcgtcctcccggctcaggcggcgtcgccggaaggtactacttcttgtttttttttaaaattcagagttttctgtgctccgtggcttgctcattaatgccatctttgttcatttattcagagtgtattatgaagttcataggactagtatgtatttggttgctgtttgttcgtatgccttgcttgaaagtttcagagctcgtattttggactgtgttctttgtgatcaggaagctacagaatgcggcaaatttgagctctctctgttatttggatttattctgatgatttattttggaaaggatgtactaattggcatgtgaatttctttccctccccctttggattttggccttctgttcccatgaaatttcagttctgtaatcatgtatatgctgtctattttcgatccaattcttacttatgccttgattcctttggactgttctttcctgagacttttttttgtgcttatcacctccataatagtctattttctaggaatatgcaaagagaaaaaaggcccttgcccaatgttaggccactgagaagttcatttagtaccatatccacctcctctaacaatgctgagcatatgaaatcagaaatgttacactttatgctccctagcattgtttgttaaaacttggtcttctgaccaactgcttttgccattacagctgtagaagaacaaaaatgcctgaattcggagctctggcatgcgtgtgccggtccccttgtttcgttgcctgcagtgggtagccgagtggtttatttcccacagggtcacagcgaacaggttagaattttttcactccactacaagtaatgcttgagagtatcatgtgatggtttcactgccaaattgaaatccgatttgattctatcagaaatcagttgcttccatttctgtgtaaattcatcgggtcaattgctgccgcaggtagctgcatcaacaaataaagaaatggagtctcagatccccaattatcctaacttgcctccacaacttatttgccaacttcacaatgtgacgatgcatgtaagtttagagaacatctttttttcgtttccagagccaagtaatctcactgctgaccttgtgttgcatcgtctgcttatttccttcaggcagatgcagaaacagatgaggtttacgctcagatgacgctacaaccacttagcccggtaattcataatttttataaccacttgtgctatgtgcaaatttctaagtagtctccaagagaataatttttgggctttcttttcttttcagcaagagctcaaggacccatatctaccagctgaattaggttctgccaacaaacagccaacgaattatttttgcaaaacattaacggcaagtgacacaagtacgcatggcggattctctgttccccgtcgagcagctgagaaagtgttccctccgctggtttgtgctgtttttctcccgttttccagttattcttttaattggttcatcatctgttctaattgtctttaattttgtaggattttactcagcagcctccagcacaggagttaattgcaaaagatcttcatggcaatgagtggaagtttcgtcatatctttcgtggtgagcagttttttcctattgtcatttctaagtcctctgataataaactatgtattaccttttacagttgtgataaatactatccattaaactctggtagccattgaggtcaatttatctttgtaaatgaaaggaacaaaaatccttaaatatgtaatggaaataaggaaaattaaattaatgtttttcatgataaaatggatcaaacatggagccatggaggtgattttttttcattggggctggattatttgcttaacaaaaacgagtagcttaaggtgagaacaaagcttgctcatatattctaatttgtggtgcaggtcagccaaagcgacaccttctaactacaggctggagcgtctttgtaagtgcaaagagacttgtcgccggggattctgtcctatttatctggtacatttatttatcaaagatgcagaatgatcacttgacactgtcctgtgcttagccatttacgtttcagtggagagattgtttgtggttttatatatgtatttccttgcattgtcaggaatgacaacaaccagcttcttctgggaattcgtcgagctaaccgcccacaaactgttatgccatcttcagtcctatctagtgatagcatgcatattggtcttcttgctgcggctgctcatgctgcttcaacaaatagccggtttacaattttttataacccaaggtaatatttttgtataacatttatttactcagaattcctcctaactattcccttccgtttaatgcagagcaagcccttcagagtttgttatcccactttctaaatatgttaaggctgtatatcatacccgtatatctgtgggcatgcgtttcaggatgctttttgagacagaagagtcaagtgtacggaggtatgatgaattgtgtttgcctggtaaattttcatagactcaaaagtacataactgcctgacaggatcaaatattcttatttgcagatacatgggcacgataacaggaattagtgatcttgatgctgctcgttggccaaactcacattggcgttctgtaaaggtacatttccaggctagcattttttcttattgccttcaatcctgttctttacacatttgaccatacaagttttctgttaggcaggatgaaatttcctctttggattgcgtgttggtctcatcgtcctggtaccaacattatggttcagcatgttgatagtgtttttcttggataatgcaggttggctgggatgaatcaactgccggagagaggcagccaagggtgtcgctttgggagattgagcccttgacaactttcccaatgtacccatctccttttccactcagactgaagcgtccatggccaacaggcttgccttcattacatggtaggaggggcagttgatgtttacttcacattttcagatagctgcataattgatgtgtattactcttttaaactgtgaatcatctttcaatgatgactacctgtaggtggtaaggatgacgacttgacttcttctctcatgtggctccgagacagcgcaaatcctggtttccaatcattgaatttcgggggtctcggtatgaatccttggatgcagccaaggtttgatgcttccttacttggtctgcaacctgacatgtatcaaacgatagctgcgactgctttccaggacccaacaaagcaggtctctcccacgatattgcagttccagcagccgcagaacataggtggcagagctaatacacttctgccaagtcagattttgcagcaagtgcagcctcagtttcagcagcagcaatacctccaaaacatcaacgagaccacaatccaagggcatgctcagtctgagttccttcagcagcagctccaacgctgccagtcgtttactgagcagaagccacagctgcaaacccagcaacaacagcaagaatcacagcaacaacagcagcagcaatcgcagtgtatgcaagtcccacaacatcagcaaatgcaacagcagaagaacatgaccaactatcagtctgtacctaatgcattgtcaccgttttctcaactctcctctccttctcagtcttcacctatgacactgcaaacagtattaccattctcccagccacagagctatccagacacgagtatgagctcattgtcaccatccaacacatccaccatgcataatgcattgaggccattttcatcggaagcaccttcgcacctaagcatgccaagaccgactgcagtacctgtccctgacccatggtcatcgaagcgagttgcagtggagtctttgcttccctctcgtcctcaggttacatcgcagatggagcagttggactcaacagcacctagtataccacaaagctctgcgttggcgccgcttcctggaagaggatgcttggtggatcaagatgggaactctgatcctcaaaaccatctgttatttggcgttaacatagattcacagtcacttctaatgcaaggtggcatcccaagcctccagggtgagaatgattcgacggcaattccttattccacctccaatttcctgagcccgtcgcagaatgatttccccttggatcaaacactaagtagtgcagactgcttagatgaatcaggatatgtgccgtgttcacagaattctgatcaagtgattaatcgaccacctgcgacctttgtgaaggtgagtgctttcctatgtcatacttccctgaatctgtctctctctcgctctctctaatttgtgcttatgagattgtcagctatccactgttttgctcattatatgactttatcactaactgtgtattgctctttcctttagaatatatgtaagttgtgtgctatacatatgcatgataacttttgccattagatgtaataaactgcagtgcagtctctgaaatgctcagtatcttgttaacttattgattagtacttcttggatcactgctaatctgcaaattgtttcaatgtgaaaaacaggtttacaaatcgggaacctatggaaggtcacttgatatcactagatttagtagctatcatgaacttcgtagagaactagggcgcctatttggccttgagggccagttggaaaaccctttgagatcaggctggcagcttgtattcgtcgaccgagaggatgatgtcctcctcgttggcgacgacccttggcagtaagtttttgtaaactattctgatgataatttgagatatttcatgctcttcttacaacatgaaacttcgacaatttcagggaattcgtgaatagcgtctcctgcataaagatactttcaccacaggaggtgcagcagatgggcaagccctttgagcttttgagctcggctcccggaaagaggctaggtagcagctgtgatgactatgtgagcaggcaggaatcaagaagcctgagcacaggaattgcatctgtcggctcagttgaattctgaagcaagggcgctaacgagcccttcaatcaaatctagcctgttacctatgtttctgcagtttttcttcccctagttttgagacctggaactgaaagaacatagatccatgcttagctaagttatgtaccatctaataattatgctatatgatatcaaattccaagtagaaactatcaacttttggtatatatatatataccaaaactttgttccatgaaacactaatcctgtgaatgtaggccatctaaattatcaggctcaccgcgaagtttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0677800, RefSeq:Os06g0677800