Difference between revisions of "Os06g0703500"

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(Created page with "{{JaponicaGene| GeneName = Os06g0703500| Description = Similar to SBP-domain protein 5 (Fragment)| Version = NM_001065034.1 GI:115469799 GeneID:4341986| Length = 5130 bp| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0703500|
 
GeneName = Os06g0703500|

Revision as of 20:28, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0703500

Description

Similar to SBP-domain protein 5 (Fragment)

Version

NM_001065034.1 GI:115469799 GeneID:4341986

Length

5130 bp

Definition

Oryza sativa Japonica Group Os06g0703500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30580560..30585689

Sequence Coding Region

30580833..30581176,30582356..30582625,30583001..30583137,30583386..30584062

Expression

GEO Profiles:Os06g0703500

Genome Context

<gbrowseImage1> name=NC_008399:30580560..30585689 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30580560..30585689 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcttttgggatgaactggaatcagaagagccctgtgttttgggactgggaaaatccagcgcctttcggtccgaatacaatggaaaatcccaagagcatacctcaccctgaaccaagaggtgtagttgtcgcggccgcaaatcatggatccaccaattcatccggtggcacgttcacttctagctcggagctagccaatggttcatcgaagagctccttgtcagcgtcgttcgattcctcatccaagctggggaacagcttagagttcaggtttgcttctgtcaaagggcatggcaagaacatgtgcaaggatggcgaggccggtagagttgaagactcgggcacttctccagctgtggcagttagccatggtgagccggtaataggactcaagttagggaagagaacttactttgaaaatgtttgtggagggcagaatgtcaagagctcctctgcagcttcaggtgtgacttgtccatctactgtggtcaagaagatgaaggtgtctcagcagagcacacaaagctcatactgccaagttgaaggctgcaaagtcgatctgtcctccgcaagagaataccatcgcaagcacaaagtttgtgaagctcattctaaggcaccaaaggttattgtttctggtctggagcgccgtttttgccaacagtgtagtcggtttcatggtttagctgaatttgaccagaaaaagaaaagttgccgcaggcgtctatctgatcataatgcacgaagaaggaaaccgcaacaagaggcaatttcatttggttcatcaaggctcgccacgatgttttacgatgcaaggcagcagacagatatttactttggccaatctccttttggccaagtgagaagcaatgcaatttcttcatgtgacaacctgggaggcttcaaatttacagaagcaaaactcccctggatgaagccaatgaaaactataggccttgaggatctgaatttctctaccctgcagatgccaggcaatgttgtgtcgcatacggtgcatcatcatgattttgatgggctcataccattcaagggaaacaccccgaaggtcctcaaccaaggtgtggatccagcctgtgccgtcgtgtcctccaactcgaatggagccccggatcttcggcgtgctctctctcttctgtcaagcgattcctggggcccggccgacgttcaggccggctcccaggtgcatcccggtggagtgatgccgcccctcgccgttgccgccgccaccgtcaccgccccgacgaaccctgtcagtgtgatgcatgctctgcacccgtccaccggaggaggaggattctggcaagacggcgacgacccgcctccgctcgatcatgcctcgcaggctcaggcgttcatgcatcctggcaatggcagcagctccggctatggccatctgcactga</cdnaseq>

Protein Sequence

<aaseq>MASFGMNWNQKSPVFWDWENPAPFGPNTMENPKSIPHPEPRGVV VAAANHGSTNSSGGTFTSSSELANGSSKSSLSASFDSSSKLGNSLEFRFASVKGHGKN MCKDGEAGRVEDSGTSPAVAVSHGEPVIGLKLGKRTYFENVCGGQNVKSSSAASGVTC PSTVVKKMKVSQQSTQSSYCQVEGCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLER RFCQQCSRFHGLAEFDQKKKSCRRRLSDHNARRRKPQQEAISFGSSRLATMFYDARQQ TDIYFGQSPFGQVRSNAISSCDNLGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGN VVSHTVHHHDFDGLIPFKGNTPKVLNQGVDPACAVVSSNSNGAPDLRRALSLLSSDSW GPADVQAGSQVHPGGVMPPLAVAAATVTAPTNPVSVMHALHPSTGGGGFWQDGDDPPP LDHASQAQAFMHPGNGSSSGYGHLH</aaseq>

Gene Sequence

<dnaseqindica>4514..4857#3065..3334#2553..2689#1628..2304#ccaatgatcaaatcaagcaaagcaccactgctgctgcaaagaacaccagatagatcaaactctctctctctctggtgttgctgttagttggtagtttggtactacttggtactctgggaagaagaaagagattattatagcagaaaagcagcaccatggcatagctccaggcagcaaaaccaggtctgaaattatccctatcttttctttgcaagaaccagaatctttttatggcatggcattgtttgtggaggagtgattctccacatcattcaatcatctttaggcagggggtgaggggtgggctacaatgtgatttccaccacaaaaaggagttgttcttctttcttagggttgctgctgctgctgcttttgaggagtggagtagttgaggccatagtagtagtagaagtagaagtaaactggtatagtcactactcactacactaccagttggtgtttgttctgagcattattggagtgtcagggaagggcatgtgcttttgttggttgctgtaggaggaggcagccatccactgggcctcactctcctcttgttgctgcctcctcctcttgttactgttcagtctcaggctctcaggctcacaggtggggttttgggagatactagttaggagggaaaggttgccatcttgtgtgtgttggatctttgtgagtcatgtcctctttatcttggtgcttttgctttttcttgtgttttttcttttctttctcctatcttcttttgccacaaaacttatggctattgttttcatccaggtagaatacaacggggataacgattctctctcagctaaaggaggtgagattcttggtttcacatcaagtattattgttctttcttttacttccttcaaaatagtttctttgctttttatttcatatatggtttggtttatttatgctccccaacaagcaactggttcatgtgcggtaacaaggagcaaataatgcagctctgattgacttggggtagttgttgtggtgatagattggaaagggtttaaatagcgggtggttgtggtgatgaatgggggccagccttgatggggttgatgctgtcgtcttttaggtcggggaaacaagtgggataggatctctctcaagtcgaggtgagtgagaactcagccaagaacaacaatggagtctctgttgctttagttctgccagccaattggtttcaactttcaacgctgctacttgttattcatcacctcctcggatcggtttgatttatgctcaaggttgtgctatgcatggtcatgctgattgagggcaagatttgcagggagaggaaggatccactgtgtttcttttctgggagaaaggaaagttgaggtaattgatcgttttcgcctttcttctcttgctatgatccccacaataaagcgcgtataattcattttggatggtatgttgtacttgtctttttatctgaaagacaaaatgattttggtacccgagatatgtttattgcctttctcatccaagttctgcaatttgttgtgacgtgtgttctttctgttccttcttgtttcttgaaatcctatcagatttgcaatatatacaagtgtgagcagcagcagttgagatccttaattcagccatggcttcttttgggatgaactggaatcagaagagccctgtgttttgggactgggaaaatccagcgcctttcggtccgaatacaatggaaaatcccaagagcatacctcaccctgaaccaagaggtgtagttgtcgcggccgcaaatcatggatccaccaattcatccggtggcacgttcacttctagctcggagctagccaatggttcatcgaagagctccttgtcagcgtcgttcgattcctcatccaagctggggaacagcttagagttcaggtttgcttctgtcaaagggcatggcaagaacatgtgcaaggatggcgaggccggtagagttgaagactcgggcacttctccagctgtggcagttagccatggtgagccggtaataggactcaagttagggaagagaacttactttgaaaatgtttgtggagggcagaatgtcaagagctcctctgcagcttcaggtgtgacttgtccatctactgtggtcaagaagatgaaggtgtctcagcagagcacacaaagctcatactgccaagttgaaggctgcaaagtcgatctgtcctccgcaagagaataccatcgcaagcacaaagtttgtgaagctcattctaaggcaccaaaggttattgtttctggtctggagcgccgtttttgccaacagtgtagtcggtgagagcataatcttatttcactttgcatgctttcaagacttccttttttatatgcactaccctctttaaatcaatagacacaacaacaatgaagaaaattgtctctatctgtattgcataaagcatataccagtataaataaagtcaaagaagtagcactagtttgcttggattaaagtacaacgcaaggttcgaggttattgatctttactagtttgctgtcttatgtactctattgttttgtaggtttcatggtttagctgaatttgaccagaaaaagaaaagttgccgcaggcgtctatctgatcataatgcacgaagaaggaaaccgcaacaagaggcaatttcatttggttcatcaaggctcgccacgatgttttacggtagtactgaccccttagatgcatcacaatgctagatgccttgttctgttttgatgactgaaagctattcctttaacccaatcaatactgctgaaatagtaggatgataccgtaagcattttaacatgtaacatatccagttttctgcatacgcacgactggtgggtgttacctggtggcacacttctttttagaagggagcttaacccatcctcttgagtcttgacagttactattatattgttatataataatgcatagtaatcatatatggtagcttgtgtattttcatgatgtagttttccacttgacgcgtttttaccaagtcctacacaaatctttcatggtgacagtgtttgcgattttgcattgcagatgcaaggcagcagacagatatttactttggccaatctccttttggccaagtgagaagcaatgcaatttcttcatgtgacaacctgggaggcttcaaatttacagaagcaaaactcccctggatgaagccaatgaaaactataggccttgaggatctgaatttctctaccctgcagatgccaggcaatgttgtgtcgcatacggtgcatcatcatgattttgatgggctcataccattcaagggaaacaccccgaaggtcctcaaccaaggtacattaacatctctcaattcatcactgaactttaaagaaaagacatgcagctgttgcagcatcttcaattttaagtttttaaccatgtgtttttatttaatgatctaaatgggactacctattttagcaattcaatttcttatcagtaaataggtccgactgatttgaccttttgtttgattgttatctgtactgttcacctctctgctattcgacaacgccgagacagcattttattctccataattccttttcatacggctacaatcttctgaaaagtctttgttgctaaacagtcagcattcctgacttggagtttggattaaacaagctacttagtcataagaacacatcattttgctccctttttttcagtaactactgattactcattttatccatttgcatcagcttgctttatggacaagctagaaccacaaattgtttctcaaaaaaacaaaaacaaaaacagagaggctagatccaccaattatctgttacaagctttttggacttcctgccttggtatgttgatctttcaatctgaactgctccattttttctctgggtggagcctgggagcctttcaccatcccaaaaagcaagaaatgtgtttcacgcgagagatcgacaagaaacgactaggtcccatttactaggtttatggccccatcactgcccctgataatgacattcaccagaacttttagctggtagtccagtacccacatctgtgcctggtactaacctgggaccaacaaatacttattggatatgccagcttagtgttgcaacttgcaaggagtgtgagtcatctcaatagatacaggccttcaattcagaccccccaaaaaagtattccttttctttctgttgagctgtctaaatcatctccagttgcaggatcatagaatacaccaggcacaagcaactaaagatgatctacgatttttagacaatagatcttcattgacccggcttttgcgagaaagacagaaacaaacacgagtacagagttcagaacagaactgaagatgataaattcagagcccccccaaaaagtgtcccttttaatctgttgggcagtctaattctaaattattctctccaaattgcaggatcatatatatgaatacctgatattctgatgatgcatatgatttgtgatgattttcaggtgtggatccagcctgtgccgtcgtgtcctccaactcgaatggagccccggatcttcggcgtgctctctctcttctgtcaagcgattcctggggcccggccgacgttcaggccggctcccaggtgcatcccggtggagtgatgccgcccctcgccgttgccgccgccaccgtcaccgccccgacgaaccctgtcagtgtgatgcatgctctgcacccgtccaccggaggaggaggattctggcaagacggcgacgacccgcctccgctcgatcatgcctcgcaggctcaggcgttcatgcatcctggcaatggcagcagctccggctatggccatctgcactgattctgctgcatctatttggaacgggttgatgactggttactccgttcatgatcttaccctgtcagtgatggactctgaataatttgggggcgaattgtcctgcaaccccaggatttattatttctatttttgaaaccaaaccaccaggatatttgccattggatgagaagtgttcatgatcatgaaatgatctgttttgttccacagaatctgacatatctactactcgtcttgggaatgagctgagatcgattcgtgtgttgttcattcagg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0703500, RefSeq:Os06g0703500