Difference between revisions of "Os06g0712400"

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(Created page with "{{JaponicaGene| GeneName = Os06g0712400| Description = Protein of unknown function DUF544 family protein| Version = NM_001065092.1 GI:115469915 GeneID:4342044| Length = 58...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0712400|
 
GeneName = Os06g0712400|

Revision as of 20:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0712400

Description

Protein of unknown function DUF544 family protein

Version

NM_001065092.1 GI:115469915 GeneID:4342044

Length

5899 bp

Definition

Oryza sativa Japonica Group Os06g0712400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31005201..31011099

Sequence Coding Region

31005485..31005541,31006237..31006414,31007189..31007238,31007320..31007424,31007511..31007591
,31007674..31007755,31007844..31007898,31008014..31009067,31010105..31010192
,31010282..31010388,31010471..31010589,31010687..31010897

Expression

GEO Profiles:Os06g0712400

Genome Context

<gbrowseImage1> name=NC_008399:31005201..31011099 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31005201..31011099 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccaccgaccagcctcacctcccgccccccgcgcccccgcccggcgccgcggcggcggatccccccgagtccacccccgcgccgcctccgccgccgccgctcgagccacccgaggtgatgcacaagacgagggccgtcgacttcctcggccgccgcaccccaatcgtctaccagaacgacaacgggccgtgccctctcctcgccatctgtaacgtgatgctgctgaagaatgtgatcagcttgaacccggacgcgggcgaggtgtcgcagcagaagctgctctcgctcgtcgccgagcgcctcatcgactccaacagcaatgtgcagggtaaggacgaggagtatgtgcgcaaccgggagcagaacatctcggatgcgattgaccttttgccgcgcctcgcgaccggcattgatgtgaatgtgatgttcaggaagatcgatgactttgagttcacccgagaacgtgccatatttgaccttctggatatcccgctgtaccatgggtggatagtagatccccaggatactgacactgctacttccattggatcaaagtcttacaatgctcttgcatctgggcttgctgaatttaagtcgggggaatcaacaaaagagaatagacatgtacaggaggaagaaactgttgattttgctgctgcaactactgcagcactaggggttccttctcctagtgtttctcgaggtatatcatttgatgaaaatacactcactgacccagttgagttgcacataagacgaggcgatcgtgaggaagaagaggaactaaggagagtccttagtctatcaaaagctgaaaatgctaatgctgttgatggatctggttcctttgacacttcacagtctcattcatcctcaaatatggaggagacagcacacactgagagcttccaattagaggcagtcgaggcgatggattcaacaaataaggaggaacatggcaacagccatgctttgagcgatggccctatgttacaggacaccacaaatgctgctcctaatattaatgaagttgggatggaggaatcccaacaggttttgacgtctaatgaactagaagacgatgggaaaaggaatatcttgccagagcactctgatataaccattcaaccttcagagtctgtgcttgactgttcctctcatgagtcttctgctcccaaccaagctgctcctgcccttgggcaagttgataaagaatcctgtgaagaacaagctcccttgcaaattcatggtcaggcttctgacactgagaaaattcatggtcaggcttctgacactgagattagctctgagctaacaactgcagctagtcaagataccccaaatcatgctactaaagagctggatggggaagatggcaatagtcctgagcctatcatcttaaaccttcaggaaagtgagccaatatatcaaggagaagagcacatacttagcactggaaatttggcatatgaaaatcaggagccggtttatgagggagaggtggttcttgctgaacaagctgacaagactgagaaaagtagtgaggacatgcaagatgggcctgcagaacatcaatgggaactaatagataatttccttcagaacactgctagccagctaactgtctatggtttattttgtctacaagagggtcttaatgaaagagagctgtgcgtcttcttccgtaataatcatttcaacacaatgttcaagtacaatggaagcctatatctcttagccactgatcagggttttttcagccaaagtgatttagtatggcaaaagttggatgaggtgaatggagatggagtttttctgaccagcaatttcacaccatttaaggctgaaaacccgagaaatgattcttggaatgaacagcaggctatgacaagtaccgctgactatcttgctcaatttgacaatactaccctgcagcactcgtctggaaactctgatctagagctagctatagcacttcaacaacaggagtttgagcggcaacaacctcaacgacaccagtcgtcaacacagcagcaggagccggtgccccagcagcaacagcagacacccaatcaatcacatggcacaggtcggccaggattagttgttggtccaacaacggcaaggaggccacctgctccacagccgacgacgccgaagaaagagaagtgcatcgtgatgtaa</cdnaseq>

Protein Sequence

<aaseq>MSTDQPHLPPPAPPPGAAAADPPESTPAPPPPPPLEPPEVMHKT RAVDFLGRRTPIVYQNDNGPCPLLAICNVMLLKNVISLNPDAGEVSQQKLLSLVAERL IDSNSNVQGKDEEYVRNREQNISDAIDLLPRLATGIDVNVMFRKIDDFEFTRERAIFD LLDIPLYHGWIVDPQDTDTATSIGSKSYNALASGLAEFKSGESTKENRHVQEEETVDF AAATTAALGVPSPSVSRGISFDENTLTDPVELHIRRGDREEEEELRRVLSLSKAENAN AVDGSGSFDTSQSHSSSNMEETAHTESFQLEAVEAMDSTNKEEHGNSHALSDGPMLQD TTNAAPNINEVGMEESQQVLTSNELEDDGKRNILPEHSDITIQPSESVLDCSSHESSA PNQAAPALGQVDKESCEEQAPLQIHGQASDTEKIHGQASDTEISSELTTAASQDTPNH ATKELDGEDGNSPEPIILNLQESEPIYQGEEHILSTGNLAYENQEPVYEGEVVLAEQA DKTEKSSEDMQDGPAEHQWELIDNFLQNTASQLTVYGLFCLQEGLNERELCVFFRNNH FNTMFKYNGSLYLLATDQGFFSQSDLVWQKLDEVNGDGVFLTSNFTPFKAENPRNDSW NEQQAMTSTADYLAQFDNTTLQHSSGNSDLELAIALQQQEFERQQPQRHQSSTQQQEP VPQQQQQTPNQSHGTGRPGLVVGPTTARRPPAPQPTTPKKEKCIVM</aaseq>

Gene Sequence

<dnaseqindica>5559..5615#4686..4863#3862..3911#3676..3780#3509..3589#3345..3426#3202..3256#2033..3086#908..995#712..818#511..629#203..413#attcctcattccttctctttttttctcgctttgtttctcccgtcgtctgatccaccaccgcaacgcacgcacgcacgcgcgcctcctcctccctccgcggcggcgaccaccgcgcgcgacgccatcgccgccacctagggttagggttccggcgacccccacccccggcgatcgcgcgagggatccatccgtcctctcctccatgtccaccgaccagcctcacctcccgccccccgcgcccccgcccggcgccgcggcggcggatccccccgagtccacccccgcgccgcctccgccgccgccgctcgagccacccgaggtgatgcacaagacgagggccgtcgacttcctcggccgccgcaccccaatcgtctaccagaacgacaacgggccgtgccctctcctcgccatctgtaagaatccccccaccttctagattcccttcgggtttcaattcgcccccgcgcgcgcggcgttgtgatgtgtggggttttgttttggttgctgcaggtaacgtgatgctgctgaagaatgtgatcagcttgaacccggacgcgggcgaggtgtcgcagcagaagctgctctcgctcgtcgccgagcgcctcatcgactccaacagcaatgtgcaggttcgatcggtccccgtggggttagagatgggggttgtttgttgtgttgccttgtgaattggttgtggggtgtgattcgcagggtaaggacgaggagtatgtgcgcaaccgggagcagaacatctcggatgcgattgaccttttgccgcgcctcgcgaccggcattgatgtgaatgtgatgttcaggaagtgagtccatggttcggtttgtcggttagcggtttgttgtttatggtgctctatatgttctgatatgattcgggctgtgggcgttgcaggatcgatgactttgagttcacccgagaacgtgccatatttgaccttctggatatcccgctgtaccatgggtggatagtagatccccaggtatgcatctccttatggcatgtttgtttggtttagccatgttgaacttctgtatctagacaactggatcggcgtgcgggttagagtttactgtacttctttcgacatggaatacaataattcttgtgcttggagataacttcatgtgtataccattcacagtttctgttatttagaacagagaccatgtgttcatgcttaccatctgcaacaacactcaataaaaaaaggaagtgtaatatgtatgccagtgtacttgtccccccccccccgatatataccttatacgggcaatgtttaccattgttttgaaaactcgtttgaaagctctatcaagtagctacgtggtgattctatttgataactggtagcactcacagctattgcttggtttcgcaaatatgtatcacatttaattaagctagttttctacattgtttcccaactatgtactagttaagatcctccaatttgcaattcagacagtgcggaacttcctcgtcacaaatatatgttgttttctatgttgacgcggtcttcaaactacaacttctgatcactaatttcttttatgagtaaaagcaagacaatcactctacgttgttttccaactttttactagttaagatgctccaacctgcaatccagacagtgttgaacctcctcgtgtcacaaatatatgctgttttctatgttgacatggtcttcaaactacaacttctgatcagtagtttcttttaggagtaaaagcaagacagtcggactggctctatggttgcgttttgatttgagtattgtatgtgatgctccaacaaaaagcgtatacttgtgtctagacatgataagtttctgtagcaaccaaaacttaatataggatttatttatcttgtgcaatacaatttgttaagatagccagaaggatgctcgaacagcatagtcaatacctccctacatgctggatgcataagagatttcgcttgcctcttacgtctgcaattctcacctgcatgctaattctgattgtttcatatttttaggatactgacactgctacttccattggatcaaagtcttacaatgctcttgcatctgggcttgctgaatttaagtcgggggaatcaacaaaagagaatagacatgtacaggaggaagaaactgttgattttgctgctgcaactactgcagcactaggggttccttctcctagtgtttctcgaggtatatcatttgatgaaaatacactcactgacccagttgagttgcacataagacgaggcgatcgtgaggaagaagaggaactaaggagagtccttagtctatcaaaagctgaaaatgctaatgctgttgatggatctggttcctttgacacttcacagtctcattcatcctcaaatatggaggagacagcacacactgagagcttccaattagaggcagtcgaggcgatggattcaacaaataaggaggaacatggcaacagccatgctttgagcgatggccctatgttacaggacaccacaaatgctgctcctaatattaatgaagttgggatggaggaatcccaacaggttttgacgtctaatgaactagaagacgatgggaaaaggaatatcttgccagagcactctgatataaccattcaaccttcagagtctgtgcttgactgttcctctcatgagtcttctgctcccaaccaagctgctcctgcccttgggcaagttgataaagaatcctgtgaagaacaagctcccttgcaaattcatggtcaggcttctgacactgagaaaattcatggtcaggcttctgacactgagattagctctgagctaacaactgcagctagtcaagataccccaaatcatgctactaaagagctggatggggaagatggcaatagtcctgagcctatcatcttaaaccttcaggaaagtgagccaatatatcaaggagaagagcacatacttagcactggaaatttggcatatgaaaatcaggagccggtttatgagggagaggtggttcttgctgaacaagctgacaagactgagaaaagtagtgaggacatgcaagatgggcctgcagaacatcaatgtgagaattttgtttgtcctgtcatctattatgtatttgtatttgtttgaagatcaaacacacatgaatatccagtgcataatgtttgatattacattttcttatttgtttgcaggggaactaatagataatttccttcagaacactgctagccagctaactgtctatgggtgcgtacttactatataggtttaaacctcgtgtatatttcttatttatactgttaactaatgcctgggcgaaatttctacattacagtttattttgtctacaagagggtcttaatgaaagagagctgtgcgtcttcttccgtaataatcatttcaacacaatgttcaaggtatgatgattaattaagttatagtctccagtttctttaataagccacccaagttaagttcttaagttcttttttggtgcagtacaatggaagcctatatctcttagccactgatcagggttttttcagccaaagtgatttagtatggcaaaagttggatgaggtacaccacaccatttccaacagtttgtttgctcgaaataagggttcttttactgatttattctgttcgcaattgatattcatcaggtgaatggagatggagtttttctgaccagcaatttcacaccatttaaggctgaaaacccgagaaatgattcttggaatgaacagcaggctatgacaagtaccgctgtatgtgcaacatcgataagctggtgttatctccattggtttctataatgttaactgattcaaattgtattctgtccacaggactatcttgctcaatttgacaatactaccctgcagcactcgtctggaaagtatgcccttcctacctatgtttttctttaagtagtgatgtattggtcagtcagagagtaggtgttactggaatcgctgttttgacctctatggtgttgtgcgtctcttgaatgacattttgcttgtcaacgcaagtacatctattcagctatattgatgccacttgaacccagaatatctctctagcctgttctcagcttttattttatatggtgttctgctgtctgtaggttctggatatctgttttgttttatgataatttgttgcaacccaagtatgatgctatttcccatggtcagttccttggtagtttgtgatagctgggaatcttgaaattcttgtcaaactaatcatttaccactctcctggtgaccaatatttagatatggttcatggagttcatatgcctgcttattgtgaatgtatctttatcttacttgaagttgacatgctcacaaatgctccccgtgcatgaggttaattaagttcagtcttcacttatctcacaagcacattatagttaatgcacaatcagtttggtatgacaatccagtcaacaagtttgctttacatcttaacaaaatgtgcatgacactggaagagaattgtgcaatgcacctgcacactagtaccgtggctaaatttcatttaatactatcgacacacttcctattgttgtttcttttaggtattattgcttttgtttctgcacgtgtgcataaggtgagtaaggtctaatatatgtgtgttggtgtttcttctgttctggcagctctgatctagagctagctatagcacttcaacaacaggagtttgagcggcaacaacctcaacgacaccagtcgtcaacacagcagcaggagccggtgccccagcagcaacagcagacacccaatcaatcacatggcacaggtcggccaggattagttgttggtccaacaacggcaagggtatgtttttttgctttgaaggattctgccagtagcaaatttctgttaattagtacaaaaaagaatctcattgttgtgcactgcatgttaggattgttatatttgatttagatgatatctgtcatagcttgtagtgcgttggggggcttgaggcttttagtttataaggttaaacttgctctggagtcaccagtttgtcgtaaggggcttggggcttttagtttataaggttaaacttgctttggactggcatatgcaatttggttttaggattgccgaattatccacaaatatgattagtctttttgaagcagaacatatgttctccgtatacttttatgcaaggttaaaaactcatgaaacctgcatcctgcggctaaaatatcagaaaatcacctgttttgtctctagtatacacctgaacccaaccaacaagctaatttactgcacaaactgtcgttatgatgttatatcaagaggaaaatagagttaatactaacatgttctaaggagcaagcagatcatggggttgaacttttcgttttcgttcttttccccttattttcatctattgcttgatcccttgatcgtgtcagaaccgaggacacgtggttttacttgttccaatccgtattatacaactagtataccctgtttgatggatctgaatatggagtggtttgatctttgttcagaggccacctgctccacagccgacgacgccgaagaaagagaagtgcatcgtgatgtaaagatacaacatatcggagacgggacaggagaaaggaaaagggagggggacaaggagcatcacatagtatactgtaaagaatcttcttgtctactcttcttctttagtgccgcggcatagcagcagcctgttgtttttttagccacttttcccaatcttgagcgctcttcattttgcgtgttttttcttccctggtgtaaataaccttcaaagaagtcataaaacgtaaacagatgctgtcaaatgatagccctccaacgcgatgtgattggttcatcgtatagt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0712400, RefSeq:Os06g0712400