Difference between revisions of "Os06g0727200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os06g0727200| Description = Catalase isozyme B (EC 1.11.1.6) (CAT-B)| Version = NM_001065170.1 GI:115470071 GeneID:4342124| Length = 3892 bp| D...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os06g0727200|
 
GeneName = Os06g0727200|

Revision as of 20:29, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0727200

Description

Catalase isozyme B (EC 1.11.1.6) (CAT-B)

Version

NM_001065170.1 GI:115470071 GeneID:4342124

Length

3892 bp

Definition

Oryza sativa Japonica Group Os06g0727200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31821287..31825178

Sequence Coding Region

31821391..31821405,31821522..31821618,31822530..31822807,31823159..31823935,31824157..31824246
,31824441..31824508,31824599..31824692,31824805..31824864

Expression

GEO Profiles:Os06g0727200

Genome Context

<gbrowseImage1> name=NC_008399:31821287..31825178 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31821287..31825178 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccctacaagcatcggccgtccagcgggagcaattccaccttctggaccaccaactccggcgcccccgtctggaacaacaactccgccctcaccgtcggagagcgaggccctatcctccttgaggactatcatctgattgaaaagcttgcacagtttgacagggagcgtatccctgaacgtgtcgttcatgcaaggggagccagtgccaagggattttttgaggttactcatgatatttctcacctcacatgtgctgattttctccgtgctcctggtgttcagaccccagttattgttcggttctccacagtcgtgcatgagcgtggaagccctgagacattgagggatccacgtggttttgctgtcaagttttacactagagagggtaattttgatcttgttgggaacaatatgcctgtcttttttatccgagatgggatgaaattccctgacatggtccatgctttcaagccaagtccaaagaccaatatgcaggagaactggagaatagttgatttcttttcacaccacccagagagcctgcacatgttctccttcctctttgacgatgtaggcatcccactcaactacaggcacatggagggttttggtgtcaacacctacaccctaatcaataaggatggaaagcctcaccttgtcaaattccactggaagcctacctgtggtgtcaaatgcctgttggatgatgaagctgtgactgttggcggcacctgccacagccatgccacgaaggacttgactgattctattgcagcagggaattacccagagtggaagctttacatccagactattgatcctgatcatgaggacagatttgacttcgatcctcttgatgtcaccaagacatggccagaggatatcatccccctgcagccagttggacggatggtcctgaacaaaaacattgataacttctttgcagaaaatgaacagcttgctttctgcccagcgataattgtccctggaatccattactctgatgataagctgctccagacaagaattttctcctatgctgatacccaaaggcaccgtcttggcccaaactatttgatgcttcctgtgaatgcaccaaaatgtgcataccacaacaaccaccacgatggctccatgaatttcatgcacagggatgaagaggttaactacttcccttcaaggtttgatgctgcacgtcatgctgagaaggtccctattcctcctcgtgttctaacaggctgtcgggaaaagtgtgtcattgacaaggagaacaatttccaacaggctggtgagagataccggtcatttgaccctgccaggcaagatcgttttctccagcggtgggttgatgctctctcagatcctcgtattacacatgaactccgtggcatctggatctcctactggtcgcagtgtgatgcgtcccttgggcagaagctggcttcacgtctcaacctgaaaccaaacatgtag</cdnaseq>

Protein Sequence

<aaseq>MDPYKHRPSSGSNSTFWTTNSGAPVWNNNSALTVGERGPILLED YHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVIVR FSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKP SPKTNMQENWRIVDFFSHHPESLHMFSFLFDDVGIPLNYRHMEGFGVNTYTLINKDGK PHLVKFHWKPTCGVKCLLDDEAVTVGGTCHSHATKDLTDSIAAGNYPEWKLYIQTIDP DHEDRFDFDPLDVTKTWPEDIIPLQPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGIH YSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNY FPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRW VDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM</aaseq>

Gene Sequence

<dnaseqindica>105..119#236..332#1244..1521#1873..2649#2871..2960#3155..3222#3313..3406#3519..3578#cttctctcctcgtccttatcaccaccaatccgatcctcttctcttctcttctcttcttccccacatccagttcgattctcatctctcccacaacaaatcacgccatggatccctacaaggtgccgccttttcctgattttcttttcttctagatcgatcgtcgatttggtttggtttggtttcttgatgcgctcatcccaatctgactgactcactggattcctcctccttgcagcatcggccgtccagcgggagcaattccaccttctggaccaccaactccggcgcccccgtctggaacaacaactccgccctcaccgtcggagagcgaggtactgagctgctccatcctccatcttcctcatctcttcctccacgaatctatacttcctatcgatccatgtgctttatgtctgcttagaggcgtatttgggcttgcttccatcatgatccaatgttaactttgagcgatcagatgcttaataatttgtctgtgtctggtagcaacagaaaaggtccctggatctgtgtgaattggactgtagcacgacgtgtgcgatcttgccttactattgttcctttagagctattcaaagtttgcatctttggtgtgggggggttttcagccttttgctttgagtaacatgtccttgtcactaccttgtgattcatctgtgctgcttacacacaaagaggaagatctctagtttggttgcactatgttcttgttattgctcggttacactccttcatcaacgctaaaagacgcagtcttgatatttttctctgtcgctgtcaatctgtcataccattaataaagaacgtataaaaattgaccttttccccattcatagtagtgattatctcacttgtcctcagttctaaaacagcattcttgttttttgggggtttttttaccattatcggttcactttacaaagtaatctgatgacgatcaaatttactggagtaccagagaagcacaagtctatttcatacatatatccaacatgactcaagtttcgaaagtgactggaagtcatgttccaaatgtcatggtcactaaaagtaccaaactctgacaaagatgtatttgcatctagaactaagtgcttctatcatcgatctgtgaagttttctttctagtgttttccctttatttatactcagcaactcctgtatttttgcaatctgtaatcatggctgttttgtggtttgacatgatgaattcttcaatcgacaggccctatcctccttgaggactatcatctgattgaaaagcttgcacagtttgacagggagcgtatccctgaacgtgtcgttcatgcaaggggagccagtgccaagggattttttgaggttactcatgatatttctcacctcacatgtgctgattttctccgtgctcctggtgttcagaccccagttattgttcggttctccacagtcgtgcatgagcgtggaagccctgagacattgagggatccacgtggttttgctgtcaagttttacactagagaggtacttgctctttcgcttctttctttcataggattgtaggagggagacattcagtataatgtattcttcaagcataaggctgtagaatcaaatgtctagttgttctcagttggttaagtagaacatgaaagattggttgtcctttacctccacactccataggtccagtgcattgcttaatcttatatctactaaagcaaatgagggtaatttggtcttatatatctcaaaagtctcacacattggacatatatctaaccagtgtcacctacaactttgtcttactgtttatttactgatttgcattcagtgctgccatattttgatattttctgagtcaatgcttttcagggtaattttgatcttgttgggaacaatatgcctgtcttttttatccgagatgggatgaaattccctgacatggtccatgctttcaagccaagtccaaagaccaatatgcaggagaactggagaatagttgatttcttttcacaccacccagagagcctgcacatgttctccttcctctttgacgatgtaggcatcccactcaactacaggcacatggagggttttggtgtcaacacctacaccctaatcaataaggatggaaagcctcaccttgtcaaattccactggaagcctacctgtggtgtcaaatgcctgttggatgatgaagctgtgactgttggcggcacctgccacagccatgccacgaaggacttgactgattctattgcagcagggaattacccagagtggaagctttacatccagactattgatcctgatcatgaggacagatttgacttcgatcctcttgatgtcaccaagacatggccagaggatatcatccccctgcagccagttggacggatggtcctgaacaaaaacattgataacttctttgcagaaaatgaacagcttgctttctgcccagcgataattgtccctggaatccattactctgatgataagctgctccagacaagaattttctcctatgctgatacccaaaggcaccgtcttggcccaaactatttgatgcttcctgtgaatgcaccaaaatgtgcataccacaacaaccaccacgatggctccatgaatttcatgcacagggatgaagaggtactgtgtgtatatactttcagagatacatctcctgcattcagttgttgtgatgcatctttctgtttttgtccattacatattgtttcttccagtcaacacaaacagaatgggactatcattcagtttattgcatttacatctatttgccttgtttttaggttaactacttcccttcaattcagtttattgcatttacatctatttgccttgttttttaggttaactacttcccttcaaggtttgatgctgcacgtcatgctgagaaggtccctattcctcctcgtgttctaacaggctgtcgggaaaaggtgtgtaacttggtccacttgaactccttgcgctgttaccttgtgagcatggttttgtcccgctacattaggagactatttgctgatttggaatgcgatgaaatatgtattatagatgtggtaccctggaaagtacaatgaccacatgcatttgacacaatgttttctgcctctcttttttgttggaaatgcagtgtgtcattgacaaggagaacaatttccaacaggctggtgagagataccggtcatttgaccctgccaggtttgttcttgttcaatttaattcgtgtgaacacatcgaagagtttgagcaacaacgctaattaaacttttctttttgtatgtaacacaggcaagatcgttttctccagcggtgggttgatgctctctcagatcctcgtattacacatgaactccgtggcatctggatctcctactggtcgcaggtaacataatttcttcgtgggtgcaaagtgcttatcagttgtcagtgagagatcatgtacaattgtaccttgtattgacacactgaaaccatatatttgtgtgttgttgcagtgtgatgcgtcccttgggcagaagctggcttcacgtctcaacctgaaaccaaacatgtagatcggccaggaggaatccagtggtggtgctatgttggacagtcaaacatgaactgtaatgtgtcgaccagccgtagtcgtgaataaaatgtgatacggtgatatgtatactggtgacgcaagttgtgaaactgtatctggaatcctgaaaatatgccttgctgtgtcttgggaaagagataataaagactgatacagtgggtgctatatgtttgaacttgtttatacatctgccatctcttgtttgcctttgtgttaagatggctttagagactggaacgaacaaccagctgtttgcctttgtgcctttgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0727200, RefSeq:Os06g0727200