Difference between revisions of "Os07g0106200"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0106200| Description = Similar to Hexose transporter| Version = NM_001065239.1 GI:115470210 GeneID:4342198| Length = 4456 bp| Definition =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0106200|
 
GeneName = Os07g0106200|

Revision as of 20:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0106200

Description

Similar to Hexose transporter

Version

NM_001065239.1 GI:115470210 GeneID:4342198

Length

4456 bp

Definition

Oryza sativa Japonica Group Os07g0106200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:348231..352686

Sequence Coding Region

348439..349539,351979..352301,352418..352550

Expression

GEO Profiles:Os07g0106200

Genome Context

<gbrowseImage1> name=NC_008400:348231..352686 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:348231..352686 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcggcgcggtggtgagcacgggggcaggcaaggactaccctggcaagctcaccctcttcgtcttcttcacatgcgtcgtcgccgccaccggtggtctcatcttcggatatgacatcggtatatcaggtggtgtgacgtccatggacccgttcctgaggaagttcttcccggaggtgtatcggaagaagcagatggcggacaagaacaaccagtactgcaagtacgacaaccagctgctgcagaccttcacctcgtcgctctacctcgccgccctcgtctcctccttcttcgccgccaccgtcacccgcgtcctcggccgcaagtggtccatgttcgccggcggcctcaccttcctcatcggcgccgccctcaacggcgccgccgagaacgtcgccatgctcatcgtcggtcgtatcctcctcggtgtcggcgtcggcttcgccaatcagtcggtgccggtgtacttgtcggagatggcgccggctcggctgcgggggatgctgaacatcgggttccagctgatgatcaccatcggcatcctggcggcggagctgataaactacgggacggcgaagatcaaggccgggtggggatggcgggtgagcctggcgctggccgccgtccccgccgccatcatcaccctcggctccctcttcctcccggacacccccaactcgctcatcgacaggggccacccggaggcggcggagcgcatgctccggcgcatccgcggctccgacgtggacgtgtcggaggagtacgcggacctggtggcggcgagcgaggagtcgaagctggtgcagcacccgtggcgcaacatcctccgccgcaagtaccgcgcccagctcaccatggccatctgcatccccttcttccagcagctcaccgggatcaacgtcatcatgttctacgcccccgtgctgttcgacaccctgggcttcaagagcgacgcgtcgctcatgtccgccgtcatcacgggcctcgtcaacgtcttcgccacgctggtgtccatcttcaccgtggaccgcctcggccgccgcaagctgttcctgcagggcggggcgcagatggtggtgtgccaggtggtggtggggacgctgatcgccgtcaagttcgggacgagcggcatcggcgacatccccaaggggtacgcggcggtggtggtgctcttcatctgcatgtacgtggcagggttcgcgtggtcgtggggcccactggggtggctcgtccccagcgagatcttcccgctggagatccggccggcggggcagagcatcaacgtgtcggtgaacatgctcttcaccttcgtcatcgcgcaggccttcctcaccatgctctgccacatgaagttcggcctcttctacttcttcgccggatgggtcgtcatcatgaccgtcttcatcgccctcttcctccccgagaccaagaacgtccccatcgaggagatggtgctcgtctggaagtcccactggttctggcgccgattcatcggagaccacgacgtccacgtcggcgccaaccacgtctccaacaataagctccaaccataa</cdnaseq>

Protein Sequence

<aaseq>MAGGAVVSTGAGKDYPGKLTLFVFFTCVVAATGGLIFGYDIGIS GGVTSMDPFLRKFFPEVYRKKQMADKNNQYCKYDNQLLQTFTSSLYLAALVSSFFAAT VTRVLGRKWSMFAGGLTFLIGAALNGAAENVAMLIVGRILLGVGVGFANQSVPVYLSE MAPARLRGMLNIGFQLMITIGILAAELINYGTAKIKAGWGWRVSLALAAVPAAIITLG SLFLPDTPNSLIDRGHPEAAERMLRRIRGSDVDVSEEYADLVAASEESKLVQHPWRNI LRRKYRAQLTMAICIPFFQQLTGINVIMFYAPVLFDTLGFKSDASLMSAVITGLVNVF ATLVSIFTVDRLGRRKLFLQGGAQMVVCQVVVGTLIAVKFGTSGIGDIPKGYAAVVVL FICMYVAGFAWSWGPLGWLVPSEIFPLEIRPAGQSINVSVNMLFTFVIAQAFLTMLCH MKFGLFYFFAGWVVIMTVFIALFLPETKNVPIEEMVLVWKSHWFWRRFIGDHDVHVGA NHVSNNKLQP</aaseq>

Gene Sequence

<dnaseqindica>3148..4248#386..708#137..269#atccctcttctttgtctgatcgatcgattgcttctccctcctctcgctactagactagagagtaggtagagctagctttctagctcgtggatcgttaagtttgtagtcctgcccgggcgccggcggtgaggtcgcgatggccggcggcgcggtggtgagcacgggggcaggcaaggactaccctggcaagctcaccctcttcgtcttcttcacatgcgtcgtcgccgccaccggtggtctcatcttcggatatgacatcggtatatcaggtacgaacaattaattaactatatatactcacttaattgttcatggtgccttgaatctatctatatatatacaatcatgaacaaataataataattaaaacaaaattaatacacaggtggtgtgacgtccatggacccgttcctgaggaagttcttcccggaggtgtatcggaagaagcagatggcggacaagaacaaccagtactgcaagtacgacaaccagctgctgcagaccttcacctcgtcgctctacctcgccgccctcgtctcctccttcttcgccgccaccgtcacccgcgtcctcggccgcaagtggtccatgttcgccggcggcctcaccttcctcatcggcgccgccctcaacggcgccgccgagaacgtcgccatgctcatcgtcggtcgtatcctcctcggtgtcggcgtcggcttcgccaatcaggtacccagccgcccgccctattcttatttgtccatttaattatttattactccattattggtctcaattaatatatactactattaagcgacacagagtatatggatcgagttgcatgcccctaaccagcttaaaattaacacactaccatatactcttagttatcgtgtatttaattaagtaaattaagatatgcttttcttcgggttacatcaattaatgagaacacgatcgaagacgatgctgctcgatcagtctcatgtgatggttacatcgtgaagaaaattatgttatgtaaagctagccggcgtctcacatgcgctacgctgatggagccatccaatatatgagacaaaaatgttaatataaaccggccagttgcaccaccacccatcattattctactgttataacatcgattccttccatgaccattagtatatactcatataaaattaatatatactttttccacaaagagatcaacgaaatatccatgggtgagattaggtacgttgctcgttttgaacacaatcaattgattagttaacaaatatgtatgctttatcatgccaagctgggcaagccagcaacttacatgtgcaaattaagtccaagctggtcattatctaaaaaagaagtccaagctggtaggcctatcagctagctagccatagatttcttttatgttaattaatttctcaagtactacaaaagtccctagtatctcattttcatatatagtcttcaagagaaagtatagggcccacccaattggataggttgatggtgatatgcatgcatatgcaaatattatgtgcttcccaaagtccaagctggatgtttacttccaaagctacagaggttgactgatttgtttgtttatcactcgcagtagctggccatgatttgattacttgttcccattgccacttcttctcttcttgctgcttaatttgtctcttgctctgagctgtgattttgactctcatagcatattatactattcattcatcccccacatggaagatattaattagtagatggccacttaacgaatattattggcatatatgtaaactgtcctgaaaattaaagagcgagaatctcgcccgaattattggcaagcagctgatatatccgctctcaaactaaattaaatgtgaattagtttaaggtctgacgtgatgaggttcaactgtaagattctcttgcgtaccaaattaatatatataaatatccttccatttctgaagcatgcatcatcatctgttcttatgcataaacgcaatagccaaatatgcatattttatcatcatcttttcctaatcatgcacatatttataaaatctattaaaaatattcatatttttcttcgcaaatcaattctcgcattgaatgcatcggtggcatgcaagctgtagcttgaactctcgatggatcatccatgatccatgcattcatccaagattcacgtggaattgaagacgcctttttctctttatttttttttcaattaattgatgaaaagcaagagtacgtgttgatgcatgtgaagctgattaaccttgaattgaagcataaacgtcgatagcggcaaaggaaacttatccagataactaagataattaatttcaaacctttttccatcatctagaaactgcattcatgttaattagtcaaggactgaaatgataatgttaatattagtcgatcactgatgatccttgtcggtacgtttccaattgattaaagggtaaagctatcgataattatctgctactagtaaaataattaagcagaaactggagtagaaaggaaaatatagggttttaattgtggacgtcattgtatgaaagaatagtcgtgtggatagattagactagtcgtcacgatagttggaagaattctgcgtacacttgcagagtaggccattgctttctttcttagattgaagacttgacctgcatatatatacggttacaactataccagcagcgtcgttttcagcaaaggaacaagactgaaaaagaatcgtattattacttactgtacgtattagactagtggaaataaagggacagatcgatcgatcgatgtgagatatgttgaatttgaagggagaataacacaatcattaaaaaaaattcatgcctttgtctcaatcgatatataaaatattgtcctatctgctgaaaaatgaacatatatgtcggcatagtagtagctagtagtcttctactttgcagaaaattattaacacatatatatgtgatgaacaattaattaattaacaaacagtgtaatttatttcctgctatatatattaattccatgaatgctgaatgaattatatatatatatatatatatatatatatatatatattggtgatggatgaaattaatatgagaaatgatgaatggatatgatatgcagtcggtgccggtgtacttgtcggagatggcgccggctcggctgcgggggatgctgaacatcgggttccagctgatgatcaccatcggcatcctggcggcggagctgataaactacgggacggcgaagatcaaggccgggtggggatggcgggtgagcctggcgctggccgccgtccccgccgccatcatcaccctcggctccctcttcctcccggacacccccaactcgctcatcgacaggggccacccggaggcggcggagcgcatgctccggcgcatccgcggctccgacgtggacgtgtcggaggagtacgcggacctggtggcggcgagcgaggagtcgaagctggtgcagcacccgtggcgcaacatcctccgccgcaagtaccgcgcccagctcaccatggccatctgcatccccttcttccagcagctcaccgggatcaacgtcatcatgttctacgcccccgtgctgttcgacaccctgggcttcaagagcgacgcgtcgctcatgtccgccgtcatcacgggcctcgtcaacgtcttcgccacgctggtgtccatcttcaccgtggaccgcctcggccgccgcaagctgttcctgcagggcggggcgcagatggtggtgtgccaggtggtggtggggacgctgatcgccgtcaagttcgggacgagcggcatcggcgacatccccaaggggtacgcggcggtggtggtgctcttcatctgcatgtacgtggcagggttcgcgtggtcgtggggcccactggggtggctcgtccccagcgagatcttcccgctggagatccggccggcggggcagagcatcaacgtgtcggtgaacatgctcttcaccttcgtcatcgcgcaggccttcctcaccatgctctgccacatgaagttcggcctcttctacttcttcgccggatgggtcgtcatcatgaccgtcttcatcgccctcttcctccccgagaccaagaacgtccccatcgaggagatggtgctcgtctggaagtcccactggttctggcgccgattcatcggagaccacgacgtccacgtcggcgccaaccacgtctccaacaataagctccaaccataatccgctcacgaatatcgtcgtccatgtctccgtcacgccctatattcttcttcttgtgttcatccccgtgtacagtagatgccttttattagtttgttttgttttgcctagtcagtcttcaatcttaatgtacgtgtgtttcttgtttggccaaattgatcttaattgctgtacctttcactgtcaaagagcgtcccttgttaccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0106200, RefSeq:Os07g0106200