Difference between revisions of "Os07g0110400"

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(Created page with "{{JaponicaGene| GeneName = Os07g0110400| Description = Armadillo-like helical domain containing protein| Version = NM_001065267.1 GI:115470266 GeneID:4342227| Length = 662...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0110400|
 
GeneName = Os07g0110400|

Revision as of 20:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0110400

Description

Armadillo-like helical domain containing protein

Version

NM_001065267.1 GI:115470266 GeneID:4342227

Length

6622 bp

Definition

Oryza sativa Japonica Group Os07g0110400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:574571..581192

Sequence Coding Region

575822..576031,576107..576259,577019..577188,577738..577852,578462..578623
,578789..578893,578969..579199,579277..579410,579484..579738
,579822..580110,580214..580306,580395..580520,580646..580897

Expression

GEO Profiles:Os07g0110400

Genome Context

<gbrowseImage1> name=NC_008400:574571..581192 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:574571..581192 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagattgcagtaaagaccgaacaaattgttgacatgttgagaaagatgcccaatcacctacccctcattaccattgtaaagcgcaacttggctcttgatttccttccacagtcagctaaggccacaggcattaactcatcatttatggcatctctaagaaagcgttgtgagttgatatgtaagcgcttgttggaaagaatactgcaggtggaagagggagctgctagtgagactgaagtccatgcacttccttatgttcttgccttgcaagcattttgcattgttgatcccaccctctgcactcctgcaactcaaccttttcagtttgttgaaacacttcaaccataccttaagaagcaggttgacaataaatcaacagcccagttgcttgaaagtataatttttgtaattgatgctgttcttccactcatatggaagccaccacaatctgtggtaatagagctagagcaggatctgaagcagatgattgttcgacactcctttttgacagttgtgcatgcctgtatcaagtgcctttgcgcccttagcaaagcagcagatagagggccaaggttattggaataccttgtaaacattttttacaagcatctgtcgggttctaactcttctaattctgatagtcagcttttgggccgatcattgttttgtcttggactgctccttaggtatggttctcaactcatggcagcatccgaaaatcaacttgatttcccaaagattatcagcttgctgaagaaggaatatcttctcaaggatgatttcagcttgaaggttcgaggtttgcaggctttgggatacatacttattgcaaagcctgattttatgctacgtaaagatatctcaaccctaatagagtcatcattgtcttctgttgttgattatagattaaagattcaaggattgcagaacctttttgagtatctacgtgatgcggaaagccagctcaatgcagagagtactggcaagcctacacccaatgcaacaaacggtggaagtgaagtgcctgttgctgcaggtgctggagatactaacatatgcggtggtattatccaattatattggaattctattcttgaaagatgcttggatataaatgatcaagtccgtcaaactgcactaaagattgttgaaattgttctccgccagggtttggttcaccccattacttgtgttccacaccttatagcactagaaactgacccactggaggggaactcaaagttggctcatcatctgctaatgaatatgaatgaaaagtacccttcattttttgaaagccggttaggtgatggcctgcagatgtcatttcgatttttcgagtccacaatcagcaatcatgatatggtggccacaaacatgaaatctaatccaattgcgtttgttaaacctgggatatctcgaatataccgcctcatccgtgcaaaccggaattccaggaacaaatttgtacactcaatagtccgtaaatttgagggtgataaccgcagttaccccacaattagctttctcatgtactgtgctgaagttcttgcgtctctcccattcacaagccctgatgagccactttacttgatatatgatataaatcgggttattcaattaagagctggagcagttgaggcaaatttgaaaaattggacttccatgtatcagcagcaagaaatggtgggtatgccaagagacactggtgatgttatgcatgagcctgggggatgctctgaccaaaatttggttgatgtctctcaaatgatgcttggcaatacatgcagcacgccagttgttaacatggccaaacttcaggaggattgccatggcgcgatagccctgcagctccttctcaagctgaagagacatctgaaaactgtctatagtttaaccgatgcccggtgtcaggcattttctttgaaggatccaccaaaatctggcgaaacaatctccaagcagaatatcccattgaacattagtaataccaacaccagtttgccgagctgcccgcaggatgcagcacgtgtataccaggatttcaagacagtgctgcgagaagacaccgtggactacgggatgtacaccgtttcggcccagaaaaaacgtccgactccaagaagctcgtcgagagtaagaagaccggcggctgttacaagaggccgtggtggtggtggtggtggtggtgatgaggacaccgatgacgaagattggactggtggtggagcaagagtgctggacttcagcgctcagggtgggcgagtaacaaggcagagggtccaagtctga</cdnaseq>

Protein Sequence

<aaseq>MEIAVKTEQIVDMLRKMPNHLPLITIVKRNLALDFLPQSAKATG INSSFMASLRKRCELICKRLLERILQVEEGAASETEVHALPYVLALQAFCIVDPTLCT PATQPFQFVETLQPYLKKQVDNKSTAQLLESIIFVIDAVLPLIWKPPQSVVIELEQDL KQMIVRHSFLTVVHACIKCLCALSKAADRGPRLLEYLVNIFYKHLSGSNSSNSDSQLL GRSLFCLGLLLRYGSQLMAASENQLDFPKIISLLKKEYLLKDDFSLKVRGLQALGYIL IAKPDFMLRKDISTLIESSLSSVVDYRLKIQGLQNLFEYLRDAESQLNAESTGKPTPN ATNGGSEVPVAAGAGDTNICGGIIQLYWNSILERCLDINDQVRQTALKIVEIVLRQGL VHPITCVPHLIALETDPLEGNSKLAHHLLMNMNEKYPSFFESRLGDGLQMSFRFFEST ISNHDMVATNMKSNPIAFVKPGISRIYRLIRANRNSRNKFVHSIVRKFEGDNRSYPTI SFLMYCAEVLASLPFTSPDEPLYLIYDINRVIQLRAGAVEANLKNWTSMYQQQEMVGM PRDTGDVMHEPGGCSDQNLVDVSQMMLGNTCSTPVVNMAKLQEDCHGAIALQLLLKLK RHLKTVYSLTDARCQAFSLKDPPKSGETISKQNIPLNISNTNTSLPSCPQDAARVYQD FKTVLREDTVDYGMYTVSAQKKRPTPRSSSRVRRPAAVTRGRGGGGGGGDEDTDDEDW TGGGARVLDFSAQGGRVTRQRVQV</aaseq>

Gene Sequence

<dnaseqindica>1252..1461#1537..1689#2449..2618#3168..3282#3892..4053#4219..4323#4399..4629#4707..4840#4914..5168#5252..5540#5644..5736#5825..5950#6076..6327#ggctagcttgagagaaaattctcctgtaataagagcaaaggccttgcgtgcagtgagtatatggcttatgaaactatgccgccattcaccattttcatttaaacactagccttcattaccatgttcacaatttgtatgtaggtcagcagtatagtcgaagctgatcctgaggtgttgggtgacaaacgtgtccagtctgctgttgaaggaaggttttgtgactcagctatttctgtccgtgaagctgcgcttgagcttgtgggtagacacattgcttcacatcctgatgtcggcctgaaggtgagtagactgctgaagttaatctgtgccatattcttggatcgaaaaggtattaacgttggcactttgccctatgccgtaacagtatattgagaaagtggctgagcggataaaggacacaggagtaagtgttcgcaaacgtgcgatcaaaatcatccgcgatctgtgtgcttcaaatccaaacacggacactactcgtgcctttgtggagataatttctcgtgttaatgacgaggagtctagtgtacaggtaagttaatataaaaaaacgtttactggtgctcttgaaatcaaattaatgttgttatagcatatttcatattgtaccagaaatgtttggcatctctcattagtttcattccgcaatgttgtatttataggttgtggatctattgtgatgtgtatatggatttcatcattacattttgtacacaaatgtcgataacggtagctattagttactgttacttggcaaattgtctttcatgttaaaaaatcaaaaccataccgcctctttgagttagatagggtaagttgtggatacattaagaattaagactattttctctctttctttgcttttgcaaaatgttgaacctcctaatctaggttccttttattttcgccctttatgcatgtgaagtttgaacattgtgcttgaaggtccactggtggtcccttcattcatctaatattttttttcctgcttgatgtcttaaaagtgaagctaacaggttgaggcttatgatatatagcaattaacaaaatatgccatgtacatctttggaacagcaatattttgtcttttttttaacatccatgataattaattcaggtagatcttcatttccttctctgtaggatcttgtatgcaaaacattttatgagctatggtttgaagaaccaactgggagtcataagcacttggttgctgatggtagttcagttcctatggagattgcagtaaagaccgaacaaattgttgacatgttgagaaagatgcccaatcacctacccctcattaccattgtaaagcgcaacttggctcttgatttccttccacagtcagctaaggccacaggcattaactcatcatttatggcatctctaagaaagcgttgtgagttgatatgtaagcgcttgttggaaagaatactgcaggtaatttctgatggagtttgattaacaagatttcgcattatcgagattggttctcacacatttgttattatcaaggtggaagagggagctgctagtgagactgaagtccatgcacttccttatgttcttgccttgcaagcattttgcattgttgatcccaccctctgcactcctgcaactcaaccttttcagtttgttgaaacacttcaaccataccttaagaagcaggtcagcatgaatttccttctattgaactttatgttgccatgtgctcgtgtctgagtaacccacgtcaatctcatgaacttcctcatattaaaaaatcatttcataagcaaagattgaatgattagctagcattagtatgcatttataaatggtcatatccttgagtctacgacctacaagccaaccttttgcaatacattagcactgtatagatttctaacttagatcatgtaggtattctgttatgtgtagtaacctgtacgcctgtttggtgatgattaaagtttagcactttagctccccgttttgcctgtgctttttatgggcaattcgccaattcctactagttgtgactgcctggagtctagtgtcttgtggcttcacaatgtgagctctatgttgctgctgacagaacctaactctatggtaaagacttccagtgtcatgtttgataggtattgaactgttctaatagaagcagaacttgagttttgattatgcttattagaaagctgatgcaattgttaatgcaaccagtgaattttgtacagcatgagttgttaatgtcttttcctgctgtacataagaatcttttttagtattttatttagcttgttagccaattgtactgtggagatatttatgttctgggtgttaatgtaagtacatttatttcatgtgaacaaactacaaattcctttgtttatcattttccctacagctagattttgcactgctcctgatcttgtatattgacaggttgacaataaatcaacagcccagttgcttgaaagtataatttttgtaattgatgctgttcttccactcatatggaagccaccacaatctgtggtaatagagctagagcaggatctgaagcagatgattgttcgacactcctttttgacagttgtgcatgcctgtatcaagtaatcatattccatccttctaccgtcagttttatttgatgatcatttgtccttatgtactacattttcacacactccatgttaggattgtttgctctttattttaaaagaaattttcatacaatatctcttgtatgggttcatctggtgactttctttattgactggaatactcgatgctagaaaactgtacatggcctatatgatttgcatagccatgggatcacatatggggtttttggtaaatatgatgcatatctggtgtgtaagataaatatccctacagctataaatagggtgatgctgcatatgttaatataatctgttaatagtttaatgttcataaaattgaaatgcaattataatttaaaacattttgtttatgaatcatcactatttgcatgtcacaattgcacacccttattttgttcaagcatcggtttattgaacttacagtcttatgtggattatcctaccttttatttattttaatcctttgctttaaacgttcttgttgatttatttcttcttgttcactttgattaacaggtgcctttgcgcccttagcaaagcagcagatagagggccaaggttattggaataccttgtaaacattttttacaagcatctgtcgggttctaactcttctaattctgatagtcaggtattagactgttacttgtttgattgagctaatttcaagtttatctaaattgctactactccctctgtcccataatataagggattttgggtggatgtgacacagggtataatgaatctggacagacggtctgtccaaattcattgtaccctgtgtcacatccaccccaaatcccttatattatgggacaaagggagtacctctgtttcatattatgctttgacttttttcctagtcaaacttctttaagttggaccaagtttataaagttggtcaaacttaaagaagtttgactaagaaatagtcaaagcgacttatagtaggaaatggagggagtatgtgtaaagcttaatggagtttttttttcctattctttgcatactatttattactccattctctagctgcacgtctcaaaattaaaaccaatgtcacaactcacaacatagtaaacagtcctgtatgaagttttattcaaggaatagttttaggaattcaaggacagttttgcatttatcctgtatgagacgtggaaactgttgtttcttttgcttccaatgctttgtaggtttgttattctgacaatctcttcttttttctgaaactcagcttttgggccgatcattgttttgtcttggactgctccttaggtatggttctcaactcatggcagcatccgaaaatcaacttgatttcccaaagattatcagcttgctgaagaaggaatatcttctcaaggatgatttcagcttgaaggttcgaggtttgcaggtgtgcacacttggaatcaattactgcacttactggcactagaaaaactagatggatggatggcatgtccacctgtctagataacagaatgttgctttagtttcatttatttttcatatttagaaactattcagtactagatgatatatttttctgtgcatgcaggctttgggatacatacttattgcaaagcctgattttatgctacgtaaagatatctcaaccctaatagagtcatcattgtcttctgttgttgattatagattaaaggtatacactctcttttagtaatatgtaatggcacatgctctgtatagactgtttaaaatggaccctcctgtccagattcaaggattgcagaacctttttgagtatctacgtgatgcggaaagccagctcaatgcagagagtactggcaagcctacacccaatgcaacaaacggtggaagtgaagtgcctgttgctgcaggtgctggagatactaacatatgcggtggtattatccaattatattggaattctattcttgaaagatgcttggatataaatgatcaagtccgtcaaactgcactaaaggtgaattagaccaatgtgcatacttttacaattgtcctttatattttacaatataaacaataattgtttttttttagattgttgaaattgttctccgccagggtttggttcaccccattacttgtgttccacaccttatagcactagaaactgacccactggaggggaactcaaagttggctcatcatctgctaatgaatatgaatgaaaagtatggtgacctaccttctcattcttatgttccttttggacataatcttctgattgttaggagttgtttgcaggtacccttcattttttgaaagccggttaggtgatggcctgcagatgtcatttcgatttttcgagtccacaatcagcaatcatgatatggtggccacaaacatgaaatctaatccaattgcgtttgttaaacctgggatatctcgaatataccgcctcatccgtgcaaaccggaattccaggaacaaatttgtacactcaatagtccgtaaatttgagggtgataaccgcagttaccccacaattagctttctcatgtaagtagccagattaaattatgcttgccaactctctattactggataatgtatttgactacaaagttgcataacaattgcaggtactgtgctgaagttcttgcgtctctcccattcacaagccctgatgagccactttacttgatatatgatataaatcgggttattcaattaagagctggagcagttgaggcaaatttgaaaaattggacttccatgtatcagcagcaagaaatggtgggtatgccaagagacactggtgatgttatgcatgagcctgggggatgctctgaccaaaatttggttgatgtctctcaaatgatgcttggcaatacatgcagcacgccagttgttaacatggccaaacttcaggtgagttagagagaactatcggcgtagtggctagtgagagttcatcaatgcatagatcggtgagccttttttttttttcatttcagtttgtttttgttgtcaggaggattgccatggcgcgatagccctgcagctccttctcaagctgaagagacatctgaaaactgtctatagtttaaccgatgcccggtgtcaggtttgccctgccagtcccatatttgaacattgttaatcctaagatgattttactgacacaagttctatttgaactttcaacattacaggcattttctttgaaggatccaccaaaatctggcgaaacaatctccaagcagaatatcccattgaacattagtaataccaacaccagtttgccgagctgcccgcaggatgcagcacgtgtataccaggtagcgatgctgaaaaattctggatttgtggggaacaaagttgtagtagcatgttttattgtctggggtttggcaggcgctgctgtgtgtgtaacatttgatgtgaatttggacgtgatggacaggatttcaagacagtgctgcgagaagacaccgtggactacgggatgtacaccgtttcggcccagaaaaaacgtccgactccaagaagctcgtcgagagtaagaagaccggcggctgttacaagaggccgtggtggtggtggtggtggtggtgatgaggacaccgatgacgaagattggactggtggtggagcaagagtgctggacttcagcgctcagggtgggcgagtaacaaggcagagggtccaagtctgactggctgctgactgactgttgttggtgcttcttgtgtacattgtaggaaattttataggtaacaggggaggtttaggtcgtcttaggggccattgttagtacatagaagcagaaaaaaggaaaggaagatatctagcttttacttagatgccattaatttggagcactccttttcttttgcttgctgttgcccaatttagatgttgtaattgctctcgggctctggcaatactccaacaaacaggttgtgctcctttctaattcaatggaaaagaaatgctttcttttgcttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0110400, RefSeq:Os07g0110400