Difference between revisions of "Os07g0152900"

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(Created page with "{{JaponicaGene| GeneName = Os07g0152900| Description = Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)| Version = NM_001065444.1 GI:115470620 GeneID:4342420| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0152900|
 
GeneName = Os07g0152900|

Revision as of 20:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0152900

Description

Similar to Glycolate oxidase (EC 1.1.3.15) (Fragment)

Version

NM_001065444.1 GI:115470620 GeneID:4342420

Length

3632 bp

Definition

Oryza sativa Japonica Group Os07g0152900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2829843..2833474

Sequence Coding Region

2830475..2830614,2831180..2831304,2831510..2831556,2831672..2831749,2831838..2831962
,2832116..2832182,2832266..2832328,2832488..2832557,2832642..2832742
,2832837..2832941,2833023..2833211

Expression

GEO Profiles:Os07g0152900

Genome Context

<gbrowseImage1> name=NC_008400:2829843..2833474 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2829843..2833474 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagatcaccaatgtcacggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactatgcatctggggccgaggacgagtggactctccaggagaacagggaggccttcgccaggatcctgtttcgcccacgcatactgatcgacgtatccaagattgacatggccacaacagtcctggggttcaagatttcaatgcccattatgattgctccctctgccatgcagaagatggctcacccagatggagagtatgcaactgcgcgtgctgcatcagcagcgggcactataatgacattgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtttcttccagctttatgtttacaaagacaggagggtggtggagcagcttgttaggagagctgaaagggctggattcaaggcgattgcgcttacggtggatactccgcgacttggccgtagggaggctgacatcaagaacaggtttgttctgccaccatttttgacactgaagaactttgaaggcctggagctggggaaaatggaccaggctagcgattcaggactggcttcttacgtcgccgggcaaatcgatcgcaccctgagctggaaggatgtgaagtggctgcagaccatcaccacgctgccgatcctggtgaagggagtgatcactgcagaagacacgaggctcgccgtggagaacggcgcggccggcatcatcgtgtccaaccacggcgcccgccagctggactacgtcccggccaccatcagcgccctcgaggaggttgtgaaggcggctcgcgggcagctccccgtcttcctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcatcgggaggccggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgctccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaaccacgtcatcaccgaggccgacaagctcggcgtcatgccgtctcgcttgtaa</cdnaseq>

Protein Sequence

<aaseq>MGEITNVTEYQAIAKQKLPKMIYDYYASGAEDEWTLQENREAFA RILFRPRILIDVSKIDMATTVLGFKISMPIMIAPSAMQKMAHPDGEYATARAASAAGT IMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRRVVEQLVRRAERAGFKAIALTVDTP RLGRREADIKNRFVLPPFLTLKNFEGLELGKMDQASDSGLASYVAGQIDRTLSWKDVK WLQTITTLPILVKGVITAEDTRLAVENGAAGIIVSNHGARQLDYVPATISALEEVVKA ARGQLPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGEAGVRNVLQMLRDE FELTMALSGCTSLADITRNHVITEADKLGVMPSRL</aaseq>

Gene Sequence

<dnaseqindica>633..772#1338..1462#1668..1714#1830..1907#1996..2120#2274..2340#2424..2486#2646..2715#2800..2900#2995..3099#3181..3369#aagtgaattttcttttctggggctggaagagcaggaatggaggtgcaggagaggatgaggaagcagtgtaggagagccatcctctctgcacacctccaatagctcatccaaacaacagctatctcactctccctccatgtctctacactctagcaattcaacaattattttcctttgttttgtcttcatctacaaatgcttggtcatcaccctcatctcttatattactctcacttccaccacaccctccatttcttgcttccatttgtcttgcttggctcttcactctccccctgttcctgcaggggtcaggcactgcctgctacaaggtaaaaaactcactggagattaagaacaattattaatttcattcttgattcagtacatggtccaatttacatgctctattgaattgatggtgtcttaatttggaaaacattttgcatggatggatttcaacaagtgttctgatgatgaaagcctgactgttctttactttcttcagacaaagaatccacttgcatgtagtagagggatttgaagttattcttatgttttcttggttaaatcaagcagctgttttcttgtttggtccagagtggtgtaggtgattcggctagctcagcgcgaagatgggggagatcaccaatgtcacggagtaccaggccatcgcgaagcagaagcttccgaagatgatctacgactactatgcatctggggccgaggacgagtggactctccaggagaacagggaggccttcgccaggatcctgtaagtattcaatgttcttttttgctatgttacagctcctgccactgttacacttttgtgcatggttttttcttgtgggagtgtatgtgagaagtgtaaaatagctgggccttaagtattgtttggtaatcagcctttaatacacattttttgggtaaattttacttccctaatccttttggggtaaatttttagtggttatttgtgagcaataacatgtttgttgatgcagttttggttctatgcttggtataaataattgttctcttattatactgaattttctattgtatttgattcacctaacataacattatcgaaaaaattaaaaaaaaaagccagcatgttcatcgttcttcgacaactttcatttgtcatagttgatcctgaaaatccattctcataccataccataactaaatgtttcatgttgctagatactgaagaacagatgtggttttcctgtttatgtacagttggttgctcaaataatttatcagtacaaatttttgcagcttcatcattagttcattacccatctcctcatatgttctgttttggccaggtttcgcccacgcatactgatcgacgtatccaagattgacatggccacaacagtcctggggttcaagatttcaatgcccattatgattgctccctctgccatgcagaagatggctcacccagatggtatgcttttgtgagattttcatttggttttgcttaatcatgttagagtaatagagctatatgtctaacacaaaaggatatcatgttagagtaatccataaataactgaagctgctgaacttttcaaagcaacatgtaaattctttctgctttgcctaccatgtacaatagagctaatattggtccaatctttatattgattcaggagagtatgcaactgcgcgtgctgcatcagcagcgggcactataatggttggtcgatgttccaatggatcacaaatagaattctacttatgaaattaatcaatccagttaatgacactgaagtactgaacacaaccttgtgccctttttttttaatcttcagacattgtcatcatgggctacttcaagcgttgaggaggttgcctcaactggaccagggattcgtttcttccagctttatgtaaacacactacacaatctctgctaatactattagtttcttcgtttgattgtccttatcaaggatcatgtaccttggatctctgtaggtttacaaagacaggagggtggtggagcagcttgttaggagagctgaaagggctggattcaaggcgattgcgcttacggtggatactccgcgacttggccgtagggaggctgacatcaagaacaggtgccctccatcttttccatggactgaacacaccagttatatcttctgcattacaaaaatgagcatgggaagcatacactgaaatgagcaaacataagatcccacatgtatcaggatttgaaacaagcagcctgtctgtggatgttgttgcaggtttgttctgccaccatttttgacactgaagaactttgaaggcctggagctggggaaaatggaccaggtgaaactcatctctcagcacacatcgtggacaccatgttcctctaatctctcatggaactaatctcccattctgatgatcaggctagcgattcaggactggcttcttacgtcgccgggcaaatcgatcgcaccctgagctggaaggtagcatcacgccattgccagtcctgtttatctgcttctctgatcgaatttactgacatgaagatgacaatagctgcttgattacttgttcatcactgtgatcaactgatgaatcatatatcaaatgttaaacaatgatgtgaattatattttgtgcaggatgtgaagtggctgcagaccatcaccacgctgccgatcctggtgaagggagtgatcactgcagaagacagtaaagccattgcctcatctctacattacatgctccgatcattaactcgaatgcaaagccactgacagtgtgatcgaattgcagcgaggctcgccgtggagaacggcgcggccggcatcatcgtgtccaaccacggcgcccgccagctggactacgtcccggccaccatcagcgccctcgaggaggtactcgatcatcttcaacctcgcatcgatggtttctgcagattcgatcagtacagtacagtgatcgatctctttggttttcggcggtgtgcaggttgtgaaggcggctcgcgggcagctccccgtcttcctcgacggcggcgtccgccgcggcaccgacgtcttcaaggcgctcgccctcggcgccgccggcgtcttcgtgagtacaccggcgaactagcaaatccatcaatgattgcgagaggtgaattctcaactggtcgatttcgtgttcttgcagatcgggaggccggtggtgttctcgctggcggcggcgggggaggccggagtccggaacgtgctgcagatgctccgcgacgagttcgagctcaccatggcgctcagcggctgcacctccctcgccgacatcacccgcaaccacgtcatcaccgaggccgacaagctcggcgtcatgccgtctcgcttgtaaacaacaacgacggcgaacttgtcgccgtcgatcgatcaccggccggccgccgcgacacgctttgccggccgacggatgatcggccgggaatgaagaagaaggtagtagctgccgaagaaaagattggaagatgcaaagttctataattttggatgatgctgcgtcatgtacttttgttaattgtcgagtgattgatcacctgtacctaattaaatggtttattggattattggcggtttatactaaacgaacaaattaatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0152900, RefSeq:Os07g0152900