Difference between revisions of "Os07g0160000"
(Created page with "{{JaponicaGene|
GeneName = Os07g0160000|
Description = Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein|
Version = NM_001065471.2 GI:297606765 GeneID:4...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os07g0160000| | GeneName = Os07g0160000| | ||
Revision as of 20:31, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0160000 |
|---|---|
| Description |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein |
| Version |
NM_001065471.2 GI:297606765 GeneID:4342448 |
| Length |
7438 bp |
| Definition |
Oryza sativa Japonica Group Os07g0160000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:3239274..3246711 |
| Sequence Coding Region |
3239274..3239386,3239472..3239702,3242516..3242642,3242729..3242788,3242868..3242960 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:3239274..3246711 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:3239274..3246711 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccaccgccgccaccgcccaggcctccgcctcctcctccaccgcctccacccgcggctcccccgccgcctcctcctcctcccactccgccgtctgcctcgtccccttcaggtggtgggcgagggtgagggaggaggcgccgccggaaggcggggtgaggtacgcggcgaccgcggcggcgtcgccctcgtcgtactacgggcttcgcttgctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcggcacgggtgccggcgccggggggcggagctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgcgaggcaaaattctagtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttggtgcttaggatatctgttcgagaaacaagcattttgactgtgaagatcagcaaaaaggacaatccagttgagaactataaacgggcatacaagatttttaatattgattctcaaccagttcatgtttgggatttttcaggccagacaaacctaatattaatgaatgagtggaataggtcaaatcatgactgctgccactcagagctagagaatattcttgaagtgcaagtctatgcaatgtctgactccttaacttccaagattggtggaaccagcaaagagtatacagaacaatcttctgcagatgttaatgatatggatgttgatttgtcctatggaagctttggaagatctagctcgcatgggctaattggattggaaaatcttgggaatacttgctttatgaacagttcaattcaatgtttggcccacacatcaaagcttgttgattatttcctaggagattatgacagggatataaatcggactaacccactaggactgaatggggaacttgctttggcatttggagaattattgaggagattatggaacaccgagagaaaaccagtttcaccacatcactttaaggcaaagattgcttgttttgcccctcagttcagtggcttcaatcagcatgattcacaggagcttcttgctttcttattggatggcctccatgaagatcttaaccaggtcaagtgcaagccatatgaagaagctaaggatgcaagtgggcgccctgacaaagaagtggctgatgagtactggagtaatcatttagctcgaaatgactctgtaatagttgatacttaccatgggcagtacaaatctacattaacttgccctacttgcagtaaaacatctgtcacttttgacccatttatgtacttgtctttgcctgtaccttccacggcaaagaggacaatgactgttacagttttcagcactgatggtagtatagagccaatctcatatgatgtcactgtgccacaatttgggagtcttaatgatcttgttcaggctttaagttctgcttgttcactgggagatgatgaaatcctgctgattacagaggtttataacaaccgcatcctccgatacctcgaagagccttcagattcagtttcattgctgagggatggagataaattggcagcattccggctaccaagaaaatatgaaaaatccccagttgtggtttttacacaccaatattttgatgagcgttctagtattgataatataacaccacaaatgaaggaatttgaggccccactgctggcagttcttcctgagagagccaatggattaactctgaagaatatctacctgaagttgttggaaccattaagattttccaagagtactagttctcttaatgatagtgggaggtgtaatagtggctgtgctgctgtcatgatggatgcaacgcctgattcagatagtaagtttcagagtgctccatcggaaaacgcccctgaaagtagccagtctgagactattgaatgccaaatgaccgaaggacctagtgagtcaaatattggtgacactactgattctgatcgggaggcacacatggaagagtttgaattttatttaataaatggaaggggtgaattccagcagacgagaatacaaacagatgaggtggatttacagacaacaccaaaccggctacttatcaatgtccattggcaacaaaatgcagtaggacaatatgacacctcaatgctgaaaagtctacctgagattcataagcttgagcttatcccgaaaggaaatgaagattctgtcgcactacatggttgtctggaagcctttctaaaagaggaaccgttgggcccagaagacatgtggtactgcccatgctgcaaaaagcatcaacaagcgatgaagaaattagatctgtggaggctaccggaagttcttgtcattcatctcaaaaggttctcgtacacccaattcacaagaaataagcttgagacatttgtggatttccccattagtgatttggatctgtcatcatatatcattgacaagagtgaactatcagactgccactatcgcttgtatgctattagcaatcactatggaaatatgggaggtggacactacaccgccagcatctaccatgaagaagggaagggatggtataagtttgatgatgagtgcgtgagacctataactgaagacagtataaagacacctgctgcttatgaccagaccaggttggatgggcatcagagctttatgtgcaacaaggtgtcctggacaaactgtgttctgaatgacaactccataccccaggttgtcatctga</cdnaseq> |
| Protein Sequence |
<aaseq>MATAATAQASASSSTASTRGSPAASSSSHSAVCLVPFRWWARVR EEAPPEGGVRYAATAAASPSSYYGLRLLHSFLHPDLVLRLERGGCRGTGAGAGGRSYA LVPADELSRVLARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSILTVKISKKDNP VENYKRAYKIFNIDSQPVHVWDFSGQTNLILMNEWNRSNHDCCHSELENILEVQVYAM SDSLTSKIGGTSKEYTEQSSADVNDMDVDLSYGSFGRSSSHGLIGLENLGNTCFMNSS IQCLAHTSKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRRLWNTERKPVSPHHF KAKIACFAPQFSGFNQHDSQELLAFLLDGLHEDLNQVKCKPYEEAKDASGRPDKEVAD EYWSNHLARNDSVIVDTYHGQYKSTLTCPTCSKTSVTFDPFMYLSLPVPSTAKRTMTV TVFSTDGSIEPISYDVTVPQFGSLNDLVQALSSACSLGDDEILLITEVYNNRILRYLE EPSDSVSLLRDGDKLAAFRLPRKYEKSPVVVFTHQYFDERSSIDNITPQMKEFEAPLL AVLPERANGLTLKNIYLKLLEPLRFSKSTSSLNDSGRCNSGCAAVMMDATPDSDSKFQ SAPSENAPESSQSETIECQMTEGPSESNIGDTTDSDREAHMEEFEFYLINGRGEFQQT RIQTDEVDLQTTPNRLLINVHWQQNAVGQYDTSMLKSLPEIHKLELIPKGNEDSVALH GCLEAFLKEEPLGPEDMWYCPCCKKHQQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNK LETFVDFPISDLDLSSYIIDKSELSDCHYRLYAISNHYGNMGGGHYTASIYHEEGKGW YKFDDECVRPITEDSIKTPAAYDQTRLDGHQSFMCNKVSWTNCVLNDNSIPQVVI</aaseq> |
| Gene Sequence |
<dnaseqindica>1..113#199..429#3243..3369#3456..3515#3595..3687#3800..4096#4177..4488#4584..4841#4954..5102#5197..5829#6094..6367#6463..6549#7224..7313#7427..7438#atggccaccgccgccaccgcccaggcctccgcctcctcctccaccgcctccacccgcggctcccccgccgcctcctcctcctcccactccgccgtctgcctcgtccccttcaggtatatgttactcatcatcttcgctgtgttttggttgtggtttggttttggttttggttttgatggggcaatgtgggtttcgcaggtggtgggcgagggtgagggaggaggcgccgccggaaggcggggtgaggtacgcggcgaccgcggcggcgtcgccctcgtcgtactacgggcttcgcttgctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcggcacgggtgccggcgccggggggcggagctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgcgaggtgagagactcgctaatggcacttccgttttccatttttttgggctactcggaggggggggggatattggtggatgctagtgagcgcaaaatcgaatttagttcaatcatgtggctaagggggatgatctccattacttccgttttttcatttttggctactcggtgaggggtattgatggatgctagtgagcgcaatagaatttagttcaatcatgtggctaagtggaatgatctggtacatgcattcctgattcctatgggtacatacatgacctttgacctggttgattcagcattgagatctaattagtttctaatgtattgtgagttccatgattttttgaacttcaataagcttgaattctagttaggggaagtgtatttagcaatccctgaaactcgggaatgctccatggcttggtatgtgacctcgaaaggatgaattcagcatttcaagctagattagtgcctcgtttgtaacgtgagggtggcaatcatctatccatactagagccacaacgtgatgctgagggcagggcttgtaggttgtaccagaccatttgctaggtggtgaacttgtttcttgcattgcttgatggttaaatatgttgtcccctttcagtctagacacatatgttttagcccattttagctctatgcctttgctatagattctttcctccaacttttgaacctctaacatagcaatactggcaatttggcatggacagttgcaaacgcaacggacttttaaaactgtagcgtttcatgcagcttcacttctgatttgtgggaagccaggataaattactcttaaagaaatttctctataagctgaagttctcaacataatataattgcatgtaaaataaataaaactgtaagtcatgatatagttacatacttacatttcatgcagggctatgctaacattgttcgcatctccatgttgcgcaaacttggagggtgcagttaggattttttttttgtttggctttcttaggaagcaaatcaaacctgtctcaaaatgattgcttttaataatgcataaattttgcattcattatctagtgagagtttagtgtctcaacagcaatgctgatgggttcatcttcctttctgcacttaagtttgtgctgtgttttcttacttgaattattgctttccaaagtaaggtttctgcaatatgcttgtcaataaaatcatgcatgcatatgatgtgtgttgctctgttctgcatctttttgcaaataggatttactgagtgagcacataccaagtgttgaggctcaactgtttagtccagtagaccccattggttgataggtgcaattttttataaatacatttttgtttcttgacaaaagacgataataaatacacatgtgcacatttttgactttcgtggaaaatatagggccttctggtctgtaggatttattcaattattgagagggaaagcaattcaatatgggttccctttaatcctaggctggccctgcttttatgacaggggcttttgttgggtttgattttatagattattttggtatcacagaagcatccatgaatatcatctcatgttttgcattttggtaacctagactttcattttagaaaacaatgtgcaacctagccactatttatctctcttctcactatgttgagtagcaagttttggtcaaacagtaagcataatcatcaattctaattgtgattgaaattattcgtctatgttcagttagtaatacccctatatgtgagacatgagtaggattatattctgaacctccatattcttgcacctttaatccagcttcttaggctatagctctccctgaaacgagtttcttgggaccctaattttaatcttcaggagttctatttggttttaaatattccttacaagtaacgaagaagaagacttggtaacgaaggtaaacttgttttgctgaagttaggctagaaaatgtttcatatagaataatataaactttctattgttacatgcgattcctatttcctctcaagtctggacttatatttcaataacaaagaatctgcagtctagaggattgatgattaattgaataggataactagaaagaagctgctgttctatatattatcgttttctctgtcgctggcaagtacctaaatgtattctcagtagatcccaatgttagctaaatatgacattattttcttggtatattttaataccattcaagctccactttgtcactatgtttaccattatgcctgtctttgttatactattgtgcattttgagcacttttggacaatatacttttggaccatgtggtgatatctgtgtgctgatagcatcctctccttgcttagcacatttcatcaatgtgctcagttcttgccttccaccaatcacagcagattacatcttccttttcagctcagctctcagctgttcactgcagcgtgcacttagctttccggcctcaccatatttcctgtgcatgtgcacgtgctgcttgcagcatgaggtgtggtcagcactcacacttacatgagtagctctttccttgtctgggtcagctaagccaagtgagagagagcagaggattaattttcagttctaggaatatatatattctgcagtgctgtaatgtcgtccaattgttttgtaccttgatgccaaagatgtttcttcagaatatcaattttcatgaaatcttgtctgtgttatttttttatttgcctaataggttcaatttacagcttccatcttgccgcatctatttctgctgactttatttctgttttcttctccaggcaaaattctagtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttggtgcttaggatatctgttcgagaaacaagcattttgactgtgaagatcagcaaaaaggtaatgctatcctatttgacagatgatatatggctctatcaaatttttttctcatgcccatccttacaatttctattctatttcaggacaatccagttgagaactataaacgggcatacaagatttttaatattgattctcaaccagtatgtcgctgtttgtctgcatttcaagttcagcaatatactcccacttgttcagtttacttaatgtttctttatccaggttcatgtttgggatttttcaggccagacaaacctaatattaatgaatgagtggaataggtcaaatcatgactgctgccactcagagctagaggtattatcagttgatactcccctgcttgatacccttgtttttctgtttcagaatcaggcataaaatttccttcctagatccatattcttatcattttttttggcatgtgcagaatattcttgaagtgcaagtctatgcaatgtctgactccttaacttccaagattggtggaaccagcaaagagtatacagaacaatcttctgcagatgttaatgatatggatgttgatttgtcctatggaagctttggaagatctagctcgcatgggctaattggattggaaaatcttgggaatacttgctttatgaacagttcaattcaatgtttggcccacacatcaaagcttgttgattatttcctaggagattatgacagggatataaatcggactaacccactaggactgaatgtatgtatagtttgtcatgagtttactgtttgtttcctttgaatatatcggctaaattcactgatgttttcattacttagggggaacttgctttggcatttggagaattattgaggagattatggaacaccgagagaaaaccagtttcaccacatcactttaaggcaaagattgcttgttttgcccctcagttcagtggcttcaatcagcatgattcacaggagcttcttgctttcttattggatggcctccatgaagatcttaaccaggtcaagtgcaagccatatgaagaagctaaggatgcaagtgggcgccctgacaaagaagtggctgatgagtactggagtaatcatttagctcgaaatgactctgtaatagttgatacttaccatgtaagttctttaaatttttcatgtgttaaagcaattacactattattttctcctgcttctcctgccattgacccttttctgacatctacttgcaggggcagtacaaatctacattaacttgccctacttgcagtaaaacatctgtcacttttgacccatttatgtacttgtctttgcctgtaccttccacggcaaagaggacaatgactgttacagttttcagcactgatggtagtatagagccaatctcatatgatgtcactgtgccacaatttgggagtcttaatgatcttgttcaggctttaagttctgcttgttcactgggagatgatgaaatcctgctgattacagaggtatgcttttatctccattgagctttggcccttttgcgtttttgccactttctatctcaggttaaacagtatgagtcatattaggccttttacttactggaagtgactacaggtttataacaaccgcatcctccgatacctcgaagagccttcagattcagtttcattgctgagggatggagataaattggcagcattccggctaccaagaaaatatgaaaaatccccagttgtggtttttacacaccaatattttgatgagtaagcacaatcagatatatttgttgctagatttttatttgacttaggtattttagtagaactaataatacgcttttggtacctctgaatccaggcgttctagtattgataatataacaccacaaatgaaggaatttgaggccccactgctggcagttcttcctgagagagccaatggattaactctgaagaatatctacctgaagttgttggaaccattaagattttccaagagtactagttctcttaatgatagtgggaggtgtaatagtggctgtgctgctgtcatgatggatgcaacgcctgattcagatagtaagtttcagagtgctccatcggaaaacgcccctgaaagtagccagtctgagactattgaatgccaaatgaccgaaggacctagtgagtcaaatattggtgacactactgattctgatcgggaggcacacatggaagagtttgaattttatttaataaatggaaggggtgaattccagcagacgagaatacaaacagatgaggtggatttacagacaacaccaaaccggctacttatcaatgtccattggcaacaaaatgcagtaggacaatatgacacctcaatgctgaaaagtctacctgagattcataagcttgagcttatcccgaaaggaaatgaagattctgtcgcactacatggttgtctggaagcctttctaaaagaggaaccgttgggcccagaagacatgtggtgagtcatgagtgccccccctgaggaacaactgttatgcttttggcttcactgcttattgaatagccttctttgcaatcttcatttcttttgttaaccaaaataggttgatgtgcgtatgtatgaagctgaaatagattgattacctttgcaaaatattacctcaatacatggctagcttgctttggattctgaattggaagtgtactgttgtactgttgttgcattactgatacccactttttttctctgctttgcattcaggtactgcccatgctgcaaaaagcatcaacaagcgatgaagaaattagatctgtggaggctaccggaagttcttgtcattcatctcaaaaggttctcgtacacccaattcacaagaaataagcttgagacatttgtggatttccccattagtgatttggatctgtcatcatatatcattgacaagagtgaactatcagactgccactatcgcttgtatgctattagcaatcactatggaaatatgggaggtggacactacaccgccagcatctacgtgagtttcctctttcatgtattctcattacacccagcctttaaaccatctttttcaatgtcttgataacgagcaaggctggttggtttctgcagcatgaagaagggaagggatggtataagtttgatgatgagtgcgtgagacctataactgaagacagtataaagacacctgctgcttatgtgctgttctacagacgagaatgatcaagatacagctgcaatacatcaaatattttttcgggatgttttgccaagtctagatcttcctacatattcaacatatggggcacttgaatctctcaagtcactaacctatacaatagcatgtacagattcaattgccgacaggagaacaaaagacctagctaatgaactattcttttccagattctttttgtacatggcttgggggtcctacaatgtaattgcctgctagtgattagcctgggttctacaaaattctttttgtcaccgaattgttgccaataatttttaaaacgatgtaacctctcctttttaattaactcgtgtgatcgatctgttcctgtcgcgagtgcgacgccatagctactcctgtgttgctccatccatgaatggctatttgccaattcctgagagtcagatggcactgacatgatgatcattgaaggtctgaaaaccccattctgtagctttgctttatggaccaggaaaatatatacatgatcatctctgattccgacctatctccagaactctgctgtttgacaaataacagaagattattgctgtcctcagtgctgtttggcctgattgccttggacaaatattctgacatatctcaacaacatcttttctgccttgacataccacaggaccagaccaggttggatgggcatcagagctttatgtgcaacaaggtgtcctggacaaactgtgttctgaatgacaactccataccccaggtacagtgaacagctgatcttcatgtgcaagctaatatgctaattccctccttttacccatgttttttctctctctgaaactttgtgcgttcgtttgtgcttgtgttgtcaaggttgtcatctga</dnaseqindica> |
| External Link(s) |
