Difference between revisions of "Os07g0160100"

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(Created page with "{{JaponicaGene| GeneName = Os07g0160100| Description = YABBY protein (OsYAB1) (Filamentous flower protein 1)| Version = NM_001065472.1 GI:115470676 GeneID:4342449| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0160100|
 
GeneName = Os07g0160100|

Revision as of 20:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0160100

Description

YABBY protein (OsYAB1) (Filamentous flower protein 1)

Version

NM_001065472.1 GI:115470676 GeneID:4342449

Length

7469 bp

Definition

Oryza sativa Japonica Group Os07g0160100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3253840..3261308

Sequence Coding Region

3254059..3254127,3257061..3257180,3257382..3257505,3257978..3258026,3259993..3260068
,3260823..3260894

Expression

GEO Profiles:Os07g0160100

Genome Context

<gbrowseImage1> name=NC_008400:3253840..3261308 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3253840..3261308 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggtccagtttacatcggagcatgtttgctatgtcaactgcaactattgcaacactatccttgtggtgaatgtgccaaacaattgttcctacaacattgtgactgttagatgtgggcattgcacaatggtgctctccatggatcttgctccttttcaccaagcacgcactgttcaagatcaccaggtacagaacagaggatttcaaggtaataactttggaagctatgacatagcttccagaaatcagaggacatcgacagccatgtacccaatgccaaccagtcagcagcaagtgtcacctatacgtccccctgagaaaagacagcgtgtcccatctgcatacaacagattcatcaaggaggagatacagaggattaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaactgggctcatcttccccggctccattttggcctcagcgtcgccgacggcggcggcggcggcggcagcaactaa</cdnaseq>

Protein Sequence

<aaseq>MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTM VLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSP IRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHFGLSVA DGGGGGGSN</aaseq>

Gene Sequence

<dnaseqindica>220..288#3222..3341#3543..3666#4139..4187#6154..6229#6984..7055#tagacagccaaaagggtcaagaggaaattgggtttgtgctctccccaaaatcctccatatatagtgcacaggaggcatcattctgttcatacatatctctcccttgcttgctttgctcctggatatatagctagcttctttctttcttcctctctccctgtgtggcacgcgcctccaatcgatctcttcggtgagtagacgcatcgagatcggggggaaatgtcggtccagtttacatcggagcatgtttgctatgtcaactgcaactattgcaacactatccttgtggtatcgtcttcctccctcatctctttctctctctagctctctctctctctctcatatcttgtgtatttctgttctaatttgaggtgtttgccggatctatatggggagttcaatttttttgtatatttttttgaaggggctaatgcgtgcatgctgtagtccatgcatagaggtagcctaagctaggggaaaataagcaccctaatcaagtatgctagctacttgtttactaaactaattgcactttgttttgtcctggataagtttgtaattttatatttctggagagttctccagtacatcgaaatccagcaatccggtctttttgcataaacttccatgtacatggtaacagaaatgcacagattttctttatggcaaacataaaatcatataaatagaaggatattgcaaacatactttgtactatttcttttcatcttctccaacttttcaagaaaaaaaaatccatatcttccacccaagggtgtcatttttgtatctccttgaaacaagactgtttctctctgacttgatccaccttgtacggttttaatttatttttacagaagggataaactcttcttggttttggatgagaaccaacatatttgtatatatcctatagcggtgcattatccagatccaacactatttgattatattctttcgctcatcaggcaaaatatcttgtacaaaatggtaattttccttggaaagaatgcttgatttgctcatagagaaaaaaaaaagtattgtccccgacatacatagtttttcgacgcatggggtcatacacatttttggaaggaacatgtacataagataatattatctgagagctttctcatgtatggatctactatactaccacaaaaagaaagaaataatttcaggtcaaattaaacttttagatgcgtgcaggtgattaaagctagcatctttaaccattaattattgcctctctagctttagctagctgctccatgcgataataccccagtgtctgtactgtgctgcacacttggagctattcctctgattattggctgtgccctgagtgtgcccacctctccaaaaccgaaattttttatgaataaacaaattttaattaacaaaaaaggctttaagctgctgcctgttgctaccacatcctgcagctttgtctctcattctgcacatgtgcagaaagaagtggatctgcctgtcatgtcattttcctctttgttgatgtttgcgcaggtgggtctcttctacatactctctctagctagctagtagtagtagctatattgtgtgtgtgtgagtatgcaatatatatgcatgcgtctcttagtatgtgttgtgctgaaagagaggagagtgtgacatgaacttttaactgtaaaagaagtgtgacatgaacttttaactgtaaagatgcctcctcttttttcatgctttttttttggaaaggatgattgtactgttcacacgaccaaatctaacttacctaagtatagatctcagtcatctgcacatagatttctctatctcaatctcaagatctgtctctctgctgtgtctctctcttcctgtttgtttgtgtgtgtgtgtctgactgatgagatgaatctagggagatattcttctttagacctgattgagatgtcatgtctctgcctcctggaggccttgagtgtgtgagatgcatcatgcattgcatggtagtaagagaaaacatgcatatatggctcaagcttctccaggcaaagagctagctaagctctcaaaagggagacacacttgggaaaaggtgttatttgtgcatgatggccaaataggactcaaaagacgatatggatatgagacatggtgcaacttttgacattcctagctactagctagctactttgtcatcacacatatatattgactacatacacatatatattgactacatacacacatacacatatatattgtgaaacggtacgtagcctagtggttgcagtgacctgagtaacaccccaaggttctgagttcaaatatccatagaagtgaattttagattgggttatattatggatggctaagttctctgtgtgataggctaagttcctaatttaaaacgggttatttgtgcttgataggctaagtttttatccaattggatatagaggccgggtaaaaaaatacacttctctaaaaacacacacacatgcattggcatttgacaattaatatatatggatatatacttcaattaatcttgtagctgcaaggctactattttttttccagcagcatggtcatctactcacctcttatttgcagtgcatgactgaacactgttgcagagaacacattgaattatttgaagagagaccagacggtagcatacgttgatatacatgttcaggccaatgctgatacatatagctagcaagctagctagcatagcattttagcattatttgcttggattcttgtggatcgatctgcgataaataattttatgaacagttatatcttataccactatttaagaatccaatgaatttggacgaagggactagggagtcaattaattaggaccaggaggtaaacaataatactgtgtgcttgtgtggtaactctaccagacttattaattggagctacatattccatgtatatatatatgtcatgaaatcctatttttttctgttttacgtttctgatagaattacccctatatatttttattaataagtttgttatgcatataataaatcacagtgttctgagagaggaaacgaaaaaaatgtaaatggatagatattataggaaaatataagagattgtgttttactcaatcaaaaaaaaaatcagaaatgtggtacatgtaaataccgaaatacgtaccgtaccttactcatgaactgagtactgttgcttctatatgtgtgcaggtgaatgtgccaaacaattgttcctacaacattgtgactgttagatgtgggcattgcacaatggtgctctccatggatcttgctccttttcaccaagcacgcactgttcaagatcaccaggtttaaaaactgaaataatggtttgaaatttcagttcaaaactgtagccgaagaatctcttgcatatatatcagctatatcttattttttatgaaacaaaacaaatgaaatattaatttctgtacgtatgtaaaaaaaagaattaatattaattatttactacgtacagtggaatggtcacatctaaatttgtttatttaggtacagaacagaggatttcaaggtaataactttggaagctatgacatagcttccagaaatcagaggacatcgacagccatgtacccaatgccaaccagtcagcagcaagtgtcacctatacgtcgtatgcacaattaattttctcatgattttatttcattgatctactaaattatggggtttattttttatttctctatataagcatgcatgcaaaatgggtatatataatatagttaaaggttatatttactgttctaggcttctaatgtataatcaaaatatattatagtaatcaagttcatgcatgagctatatatgaacctgatcacactgaattccagtaaacattagttttttccccgtatacgcatggagctgtgttagatttcccaaatgatcaatctataggtattaacacacacacacacacacacacacacatacatacacacacacacaatacatatattatcagcttgcataatttattaaattgccttgttcttctgtattcacattatagctagttttatgtattatatatatgcttgtataatagatttaaaatattggtccttttttcttctttacagcccctgagaaaagacagcgtgtcccatctgcatacaacagattcatcaagtgagatttcaagccacacatgcttgcttgaataagtatattttgacaccaaattaaataatagtataaggtgctaaatatatattgataaagaaccataaatagtcgaagtgcaggtacaaactaatccccacttcaaccttttggggaatatgcatgagttcctaagacagattaattatatttctttctatctaccgcagtgtgcaatcaaaaagctccatacactactatatactcgaccctcaggtcgattgtggacacacacacaaaaaaaaaagagtaaaacctgaatataatgattgggtgtttgggggaggggggggggatatttgaactccgacaatgattaatttgtgggcacttcgtaattatatattattatgtctaggctactacttccttttgcgctcctttaatttgtacacataatctagttagggcttgttcgctttcccttcccatggggattcaaaaggggatggggtgtggaagtaatccccgaaatcccttcaatctccatgggcatgggattaaccgaacaaacccttagtgaagtgatcattttggaccacaagttctgttggtaaattttgtggaaatgtactttacaaagttttatgatcggtcgttgtttggtcattggattttggaactttttgctactagattttttttgaagtttatacttttggaataattattcttattgctaggattttgtccggtgaattctttattttgaaagaacatattgcaaatttaacttcttttgtgtgaaaagaaaaggaatcttatttcgagtaatttttttcagtaaatatgaaactctagatattttcaaaaaggctagttattgagtaccataagaaaggtaccaaaacaaaactcacaatgtaacatatgtggttggatatttatttatatttgatcttgagtttttcttcggtttttagcagtatagaggtatatacctctaccgacatgtatacacctcatgcctaacactatgatgcacaaatacctatctgtacctcccaagaaccagaaaagttttgatgttgttgaactgtatacttttattctaattagttcaactattagggatgaatatacttatatattcaaaggcaggagaaaacctcaattaagaatggggttagtgtaagtgcatgttttatgactttggtagaccttagtctattcggaaacgggaaccaataataatatttactatcatcattttcacaagcctttagtctattagacaatattttttatttaaatacatttagtttgctaaaatccaaggaacatatacattatattgactgtggcaatgtagacatacaaatattgaactgagaaaacatgtttttttaaaatggagaaaacaatttaaaacccccagtgtcaaactaagaattcatggaaatgcaattcatatattaagttgtcatacaacatgcattgaccaaaccattttattagagtaatataaatacgctagtttatctagaggttcatgttgcaagattgtaaataagatttcagtaatatatatatgagacttgttcttttaaaataacaaatcgtgtatatatcaaattgttcaatgccacatatatatatatgatgaatgagtaaattcaacttcatttggagtatgtatagctatgctctaattaattatgtgcaccgatttttttttgtccttttggtctgcagcgcgctagctatcatgtatgtacatgtatatatatgtgatgagatctattttagacgcatgcatgtaatatgtgtgttttcttaattggatcgttatgcttctctaatctctctatatacacagacgacagaaacagatatatgtttaaatgcaaaagaattaaatgcaagtatatatgttaaattaagattaaatctcaagaagctgatttaatttaattcttgtcaatatcaacagggaggagatacagaggattaaaaccagcaatcctgagattagccacagggaggcattcagtgctgctgcaaagaacgtaagtactctaattgtaaatacttttctctaactaattagatgttgcaggcagtcaggacatactatactccttcaatcccaaaagatagtgcataaatattttctttcttatctcataatacgtccatacatgcaaattaactaacaaccccccccccctcctcctctaaattcgttattttaattttacccacaaaatttttttattttaattttattattgttatacggtttagttaagatgaattcactataggaatttgcttagatatatatatttttttagaaaatcatgaattagtaatccgatcatctcaagttagcatacgagtttttttttaaaaaaatatcttatacaactccttctatatttccaaaaggtagcgaacttaaaacctgactaaaaagggagcgaacttaaaaccccactcaaatacggatatgtatttccaaaatcgaacgaacttaaaagcgacttaattatagacggatgacgtaccaaagtaccggcaaaaacatcttcaatttttataatagtagagattaggtgcatgctttgtgttcattatgagtaatctaaacagatcaaagctatgataataattagtatttcttatctttagattagtggtggttgttacttatattttgtgtcttaaagaaaaacttttgtacaattaagctttctgcaattaggatcaactaattaattatgatatctatctataatttctcatgcgtataatatgcagtgggctcatcttccccggctccattttggcctcagcgtcgccgacggcggcggcggcggcggcagcaactaatcgcggcggcgcggcctgccggccggccaccgatcgccggcgtgcacgccggcgcgcggcggcggccggtcgagaatgcgcgcgcaggagggacgacgacgatatattattatcgcgtgtgcccctctctcttcgccgcgtaattaattaatcagttaattaattacgtacgacctactgtgttatgctatcgatccgtgttaattaattacctacgtatcttgattaattagtctcgtattatacgtactattatacgtacgtgctgtgctatgtacgtagacaacaaaaaaaaatgtgcgtgatgagttctactacgtacgtacgtactgtgttctagtgttttaatttgtatccgaaccaaggagttgtttaattaactgcatgcacatgcactggacttgaatctggagt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0160100, RefSeq:Os07g0160100