Difference between revisions of "Os07g0178600"

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(Created page with "{{JaponicaGene| GeneName = Os07g0178600| Description = Similar to Heat shock transcription factor 29 (Fragment)| Version = NM_001065563.1 GI:115470858 GeneID:4342550| Leng...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0178600|
 
GeneName = Os07g0178600|

Revision as of 20:32, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0178600

Description

Similar to Heat shock transcription factor 29 (Fragment)

Version

NM_001065563.1 GI:115470858 GeneID:4342550

Length

3277 bp

Definition

Oryza sativa Japonica Group Os07g0178600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:4171312..4174588

Sequence Coding Region

4171812..4172144,4173468..4174253

Expression

GEO Profiles:Os07g0178600

Genome Context

<gbrowseImage1> name=NC_008400:4171312..4174588 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:4171312..4174588 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatccaatgctgaatgcggtgaaggaggaggagagccacggggacggaggagggttggaggtggtggcgggagaggatggggcggcggcggtggcggcgggggtggcgccgaggccgatggaggggctgcacgacgccgggccgccgccgttcctgaccaagacgtacgacatggtggacgacgccggcaccgacgccgccgtgtcgtggagcgcgacgagcaacagcttcgtggtgtgggatccccacgccttcgccaccgtcttgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacacctatggtttcagaaaggtggatcctgatcggtgggaatttgcaaatgagaattttctgcggggacagagacatcttctcaagaacatcaagcgtagaaaaccaccttcccatactgcttcaaaccagcaatcccttgggccataccttgaggtgggccactttggatatgatgctgagatagaccggctgaagagagacaagcaattattgatggctgaggtggtgaagctaaggcaggagcagcagaatacaaaggcaaatctgaaagccatggaggataggctgcaaggaaccgagcagaggcaacagcagatgatggcattcttggcgcgtgtcatgaaaaatcctgagttcttaaaacaacttatgtcccagaatgagatgagaaaggagctccaagatgccatttcaaagaaaagaaggcgtcgcatagatcagggacctgaagttgacgacgtcggcactagcagtagcatagagcaagagtcaccggccttgtttgatccccaggagtcggtggaattcctcatcgatgggattccctccgatcttgaaaactcagctatggatgctggaggtctggtggagccacaggatttcgatgtcggcgcctccgaacagcagcagatcgggccccagggggagttgaacgacaatttctgggaggagctgctgaacgaagggcttgttggtgaggagaacgacaacccggtcgtcgaggacgacatgaatgtgttgtcggagaagatgggttacctcaactcaaatggcccaacggctggggaatag</cdnaseq>

Protein Sequence

<aaseq>MDDPMLNAVKEEESHGDGGGLEVVAGEDGAAAVAAGVAPRPMEG LHDAGPPPFLTKTYDMVDDAGTDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFS SFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRRKPPSHTASNQQSLGPYLE VGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAF LARVMKNPEFLKQLMSQNEMRKELQDAISKKRRRRIDQGPEVDDVGTSSSIEQESPAL FDPQESVEFLIDGIPSDLENSAMDAGGLVEPQDFDVGASEQQQIGPQGELNDNFWEEL LNEGLVGEENDNPVVEDDMNVLSEKMGYLNSNGPTAGE</aaseq>

Gene Sequence

<dnaseqindica>501..833#2157..2942#agtagcattcaccttctccgccctcccccctccgccgcctccgccgctcccccaccttccagaaccttcctttcccgaaatagccacccctaccctaccctaccctacccacccccgccaagatccccgccgccggcgagctcgagcccttggtggtgctccggcgggcgttgtcgcggtcggatcagctgctgctggtgctggtgatgccgctctctctttcttgcgtgtacttccgggtgggaggttgatggcgatggtgaggtgttctttggcgcggttgccctcgcccccactcttatctcctctcctcgcccatgctacctaccttcctcccccgccggagctgctctgctgctcgtactagcgtgggagctgcctcttcttgttgagccatttcttgcctacaaggacagggtgcctcgccgtcgccattgccggcgtcggagccggacaaggaggttcagtgtactgtaccgtggttttgggccttctgagctatggatgatccaatgctgaatgcggtgaaggaggaggagagccacggggacggaggagggttggaggtggtggcgggagaggatggggcggcggcggtggcggcgggggtggcgccgaggccgatggaggggctgcacgacgccgggccgccgccgttcctgaccaagacgtacgacatggtggacgacgccggcaccgacgccgccgtgtcgtggagcgcgacgagcaacagcttcgtggtgtgggatccccacgccttcgccaccgtcttgctccccaggttcttcaagcacaacaacttctccagcttcgtcaggcagctcaacacctatgtaagcccatagccacagctccctccccctccctctatattttgtcctgcaatgcacttgtttgcaacctggttcagttcttgatgtttcgccgctagcgccgatgaatgtagctgaaattgttcttgttcttggttgttggaacaacccccacaattgcagtataaactatatgttgtggagtaataagttggtgtaaccatccaaattgaattgtcatttgtggtcattcaaagtttaacagaggaaattagttaggcatttaaggttgccgggttcttttcagttgttatggttgaatagtagggatctcagatcttttttggtgataaggatatttaatctctgggaaacacttactatgtctcatgatatttcatcagagaagcgaactaacttacacaagcgcatataaacatctatttagagtttttgtttttaaaagcacaaagaaatcctagatttgacatacttctgtggaataacaagcaacgtatggacaaatgatagttgaatggcagttgtcctagatctgaaaatttggacttttctcatttttgttgggccactgtcataattgtaagaaaaaggctgttaacagaaacaaaagtcgctcaggggaaatgattcgatgtttgtttggatggatgcagcattgccctacctgcatgtgctgtagtactgtatttcaggtcttcatatctggactccatttcccaaagtaatggagatccattttcatgctgtgcctggtgtccccatcctttgaaccttttttttgggcatgttacggttgtgtaccaacatcttttatgctatgcgtcaccgtcaactacttgaacttcatataagcatcacgttgggctatttttaaatagtgtaaataagatcaatatgtttatgttttttaataaatatcctcaattcttatgctagagttgatagttaacttgtgccctctggaatggggcaacagatgactgaatttgtaatttgccccaacttatgaaatcgatgaagattgaaggagaaacttgatgaatttagtgcagaaagaactgaaaactgcacaaactgaaaccttgcaaattgaactgaaacgcattccagaaaggtacacaaaagatacttcttgtagcttcatctttgttggtactgctgcaacttgtgatcttaacaaaaaagcaaaaaaaaaaaagtgagagagaagtattagtgtgtaattctccccctaccaagaaagaagtagcatcctgttgcatacttgtctaagatgtctcttgcaactaacatttccctgaagaattgtttgtttgttttcagggtttcagaaaggtggatcctgatcggtgggaatttgcaaatgagaattttctgcggggacagagacatcttctcaagaacatcaagcgtagaaaaccaccttcccatactgcttcaaaccagcaatcccttgggccataccttgaggtgggccactttggatatgatgctgagatagaccggctgaagagagacaagcaattattgatggctgaggtggtgaagctaaggcaggagcagcagaatacaaaggcaaatctgaaagccatggaggataggctgcaaggaaccgagcagaggcaacagcagatgatggcattcttggcgcgtgtcatgaaaaatcctgagttcttaaaacaacttatgtcccagaatgagatgagaaaggagctccaagatgccatttcaaagaaaagaaggcgtcgcatagatcagggacctgaagttgacgacgtcggcactagcagtagcatagagcaagagtcaccggccttgtttgatccccaggagtcggtggaattcctcatcgatgggattccctccgatcttgaaaactcagctatggatgctggaggtctggtggagccacaggatttcgatgtcggcgcctccgaacagcagcagatcgggccccagggggagttgaacgacaatttctgggaggagctgctgaacgaagggcttgttggtgaggagaacgacaacccggtcgtcgaggacgacatgaatgtgttgtcggagaagatgggttacctcaactcaaatggcccaacggctggggaatagctaatttcattcaaattataccacattgctgtcagctttcgccatgtgaatttaactgaattttagttgaatttctgcttgctactggcatgcctccctccctgtgttactgaccgtagtgatttgttcgttgttaggccatatagcctgccagtcatgtaaaatgagtaaaggtgttgatgatccacaaatgttctgttccgtgttgtcagatggtctgcctgtatttgtagtcgtgcttagtgtgtgcaatgttgtaatgatatctaatattaatctgtacttctcgtaatgacatctgatcttaatctgattgcagaagtgctttgaattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0178600, RefSeq:Os07g0178600