Difference between revisions of "Os07g0479100"

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(Created page with "{{JaponicaGene| GeneName = Os07g0479100| Description = Zinc finger, RING-type domain containing protein| Version = NM_001066167.2 GI:297607207 GeneID:4343224| Length = 300...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0479100|
 
GeneName = Os07g0479100|

Revision as of 20:35, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0479100

Description

Zinc finger, RING-type domain containing protein

Version

NM_001066167.2 GI:297607207 GeneID:4343224

Length

3008 bp

Definition

Oryza sativa Japonica Group Os07g0479100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18060184..18063191

Sequence Coding Region

18060253..18060430,18061083..18061261,18061597..18061680,18062577..18062741,18062832..18062975

Expression

GEO Profiles:Os07g0479100

Genome Context

<gbrowseImage1> name=NC_008400:18060184..18063191 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18060184..18063191 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattactccgccatgccttctccttctccttcttcttctgccgctgcggcggcggcggcggcgtcggggtgctgcctcgacaggctgtggagggcgtgcgggggctgcggcgccgccgccgcctccgccgccgggtggacggtctgcgcgctgctcacctgcgtcttcgccgtcgtgggctcattagttggagtcttcatcggcgcgttcatggggatgtccacggaaagcggcatgctacgaggcgcaggcgtcggggtggtctccggcgcggtcttctccatcgaggccgtcgaatcgtgcatcgaaatctggagatcaagtgaatcaggaaaatacagcattatcttcgtgcttgacatcatctctagcctcttcagtggaaggattgtgtgggagaaggtcagcccagcactgcagcgcgcggtgcagagtcagatgagtctactgagtacaccattcattgacaacaatgacctttttgaaaccggaaatacaggaggcatgtcaagagatctaattaacagaatcccaaagaccacattcagcgctgcaaccaatcctgatcaggaaactgataactgttgtgcagtttgccttcaggattttggagcatcgcaatttgttcgggtcctgcctcattgccagcacacgttccacgcacgatgcatcgacaactggcttttcaggcacgcatcatgcccgctatgcagggctggtgtgcatatagaccatatacatatgtaa</cdnaseq>

Protein Sequence

<aaseq>MDYSAMPSPSPSSSAAAAAAAASGCCLDRLWRACGGCGAAAASA AGWTVCALLTCVFAVVGSLVGVFIGAFMGMSTESGMLRGAGVGVVSGAVFSIEAVESC IEIWRSSESGKYSIIFVLDIISSLFSGRIVWEKVSPALQRAVQSQMSLLSTPFIDNND LFETGNTGGMSRDLINRIPKTTFSAATNPDQETDNCCAVCLQDFGASQFVRVLPHCQH TFHARCIDNWLFRHASCPLCRAGVHIDHIHM</aaseq>

Gene Sequence

<dnaseqindica>70..247#900..1078#1414..1497#2394..2558#2649..2792#ttgcgcacccacagtggttgttttcttggatggttgccgctgcgccctgacctcacctccctctcccccatggattactccgccatgccttctccttctccttcttcttctgccgctgcggcggcggcggcggcgtcggggtgctgcctcgacaggctgtggagggcgtgcgggggctgcggcgccgccgccgcctccgccgccgggtggacggtctgcgcgctgctcacctgcgtcttcgccgtcggtacatccccctctctcgcccgcggcctcctccttcccattgcttgtcgcgcgagtgcaatcttggggtggggtgatttttatttgattttttagatgtttgcctcctcggattcttgcttcatgggagtctattggtcctactaagttcttggattgattcggtgggtggtgtgttcctggaatatgttgtgattcatggtgggaattaatcgaatcaccataggttctgttcactcttgccgccctcggagactctgtagttgatagtgtgttctttggctctccttgctttacgacttttacacgttgtggtgtggtaggctgctgcttgctcaaattgggaacaattcaatcccgcaagcaaaaattttggaggttctttgccacttccgtctcaggatttagtatatacttcactcagacgcttctacctttttcttttattcccccctttcttctctaggttttatgggcttcatggttcatcagtttcttctattttgtttgttccattgtttttgtatctttccttcttgcaagttttagttcacagaatttttgggttttccaataaagagtaggtgcatattagtcagcaatttttttatgaaagctctcattggtgttttcatctcttctgttgaatgcagtgggctcattagttggagtcttcatcggcgcgttcatggggatgtccacggaaagcggcatgctacgaggcgcaggcgtcggggtggtctccggcgcggtcttctccatcgaggccgtcgaatcgtgcatcgaaatctggagatcaagtgaatcaggaaaatacagcattatcttcgtggtgagtgtgcaagaatccaagacccaaccttccctttttacttttgtgtgttgagaaaggtgagagatcattttcacacaactactctagcgtgtgcatacatcactttgatgtaagcttgacatttgcatgtgagaaaaatatgtgctttactactaataattgccgagaaatgaagaaagcaaggaaattttactcgtaagtcgtaaagcaaatgttttggactttattatctatagtatgtcacaatttcttgtgtgcgcaaatacaatagcagcaggtgatgagtgtagttgatttttatttgctctgatgtactctgtcggttgtttcagcttgacatcatctctagcctcttcagtggaaggattgtgtgggagaaggtcagcccagcactgcagcgcgcggtgcagagtcaggtatgcagctcttcctttgagctttcataatgttcgatcgagtaagaaaccattactctcttatggctcaaataatagtttgcactgctagctatttcagtttttagggggttagatggttttaatgtatgaaaagaaaatatttttaagtatggaaatgattttaggggagaatgatgccccatactgcaacaggaagacctctatagcaactagaatatcaagaatagcattttaatgctaaagacatcaacccctagagacatctaatggcttcctgtggacatgtgacagaaagcattactccatcccatatataatgtatggatggtcaagtagtacttgggaacactgagagtacaactaatatagggttgtgtaacctggcctggtaggaaccttgttaaaagcgttcggaattttgaaactgaattatccaataaaggtaacaagacacggaaccataacttaaaacatatattaaaaggtgttatgcatgaattttaatgctgtaagtaagtatggtgtaattttttaaaaaaaaaatgaaaacaaaaaacttaatacatatactatttccgtccataaaagagcgtattttttgctatgaacctggatttatgaatgaatacaacctcccaacatccaaggcctacacataaggtttttttttattggaccaggtggtgtttccttctgtccacatacccttgtcagattttatagggcaggatatttatccattatatgcaaaactcaattgccggaagcaacaactttttaggcatgataagcatataattgcatttcgttgatttaactttgcaaggttctatgcgattgcaacagggtctatgtataattctaagtctgattcattattctctctaatgcagatgagtctactgagtacaccattcattgacaacaatgacctttttgaaaccggaaatacaggaggcatgtcaagagatctaattaacagaatcccaaagaccacattcagcgctgcaaccaatcctgatcaggaaactgataactgttgtgcagtttgccttcaggttagtgtgaacctagaatgctgcattctaaccacagatgctaaacagattagtttcttgtactgacgcaccataacttctgattgccaggattttggagcatcgcaatttgttcgggtcctgcctcattgccagcacacgttccacgcacgatgcatcgacaactggcttttcaggcacgcatcatgcccgctatgcagggctggtgtgcatatagaccatatacatatgtaaaatagaactcgcagcgcacctggtgtattttcaggcgaatacccgtgcccgcggtccgtatcataagtatagtcttgtacacataggaggcctttttttcttcccagtctttgtgtggagctatgttccagccgcacgtttttttgttacagcaataacaagttatgtactaatatacattctgaaaaaaagaactaaactaacagtctctgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0479100, RefSeq:Os07g0479100