Difference between revisions of "Os07g0486100"

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(Created page with "{{JaponicaGene| GeneName = Os07g0486100| Description = RFT1 family protein| Version = NM_001066196.1 GI:115472124 GeneID:4343254| Length = 6624 bp| Definition = Oryza sat...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0486100|
 
GeneName = Os07g0486100|

Revision as of 20:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0486100

Description

RFT1 family protein

Version

NM_001066196.1 GI:115472124 GeneID:4343254

Length

6624 bp

Definition

Oryza sativa Japonica Group Os07g0486100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18541333..18547956

Sequence Coding Region

18541707..18541776,18541869..18542041,18542122..18542174,18542258..18542413,18542747..18542884
,18543074..18543145,18543639..18543713,18543802..18543982

Expression

GEO Profiles:Os07g0486100

Genome Context

<gbrowseImage1> name=NC_008400:18541333..18547956 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18541333..18547956 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aacaaacaaattgtcaggttgtcagccatgatggactgcgataaacagttgttgcacatgtgcatgttgtttacaggacagactttcaggaaactgatgctccaagaaggcgaaaagtttgttcttgtttggtttgatactccatataaccaggctgcctatggtcttgtggataaattagggagtctggttgttagaatagttttcctgccattcgaggagagttcttatgctacatttgcacagttggcatcaggacaaaatccccagaatatatccaatttggaaggttctttgctcggagctcttaagcttattatgctgataggcttggtggtcatctcatttggtccaagttattcatatacccttcttagactactttatggggcaagatacagtgatggagatgctacagttattcttcgttactattgtttctacgtcatatgcttagcaatgaatggcacatctgaagctttccttcatgctgttgcaaatgaagacaagcttaagcagtcaaatgatatgttgctcctgttctcggcaatttacattgtgctaaatgttgtcctgattaaatctgctggtgcagttgggttgattgctgcaaattccatcaatatgctgctgcgaatcacatattcagcggcattcattaaagactatttcaagggctcattctctttccgccactgcttgccggcaggctggggtgtgttgctcatttctggcctgaccacagctttctctgaaaggatgtttctgaatagaaacaggttcaagcagacccttcccattcacatggcgataggcataatgtgcctgggtttctcatcactcgagatataccgtggtgaaaagcagttcttgacgagtataatcagatcattgaagagccgcgacaaacttgcatga</cdnaseq>

Protein Sequence

<aaseq>NKQIVRLSAMMDCDKQLLHMCMLFTGQTFRKLMLQEGEKFVLVW FDTPYNQAAYGLVDKLGSLVVRIVFLPFEESSYATFAQLASGQNPQNISNLEGSLLGA LKLIMLIGLVVISFGPSYSYTLLRLLYGARYSDGDATVILRYYCFYVICLAMNGTSEA FLHAVANEDKLKQSNDMLLLFSAIYIVLNVVLIKSAGAVGLIAANSINMLLRITYSAA FIKDYFKGSFSFRHCLPAGWGVLLISGLTTAFSERMFLNRNRFKQTLPIHMAIGIMCL GFSSLEIYRGEKQFLTSIIRSLKSRDKLA</aaseq>

Gene Sequence

<dnaseqindica>6181..6250#5916..6088#5783..5835#5544..5699#5073..5210#4812..4883#4244..4318#3975..4155#agagaggtctccttggccctcccaactcccaagttccccactccgccgcagcttctgtgccggccggacccccgttgtgccccgatttccgcggccgtcccgcccccgagcggcgctgccatctcgcattgccgccgccgccgccggtatggccacgggtgctgaggccgccgcggcgttatctcctccgggcgccgccggtgccgccgtcatgggagtcttcaagtacaacttcggtgcgtgcactctctccctctcccttctccgatccaagtctgaggttgatttcggggggtgggggatctaagtgcggcctcgttgttgcagcggcgcagttcctatccagggtcacccccttcctctacaacagctggttcgtgcgccagctcagcgccgacgactgcgcggtgcgggatcccctcccctcttcttgctcgctcgctcgctcgcttgattttatttctgtgcccagatgaagaactgaattgtgcgtttactcaccgtagtaaagcaaatgtggcgattttgttggaacccaagttgttgatttttgtagcaagctattgcatgattttattgtagggggttttaatagtgtgatttgggtttattttgaagttttacttggttgaactaaaagagaactgctctgggaatctagtccaccagcaaccgactgtgagaatccagtagatatgaacaaatcaacgttttgataatgctgtgtttcttatgtgcttcactttgttcaaatatctaatagaagcttaaactcctttatatgtcatctatctggcaggcatacgcgttacagcttcctctcttcatcaactgcgtcctatttttaagccgggaggggtttcggcgtgcatgcttgcgtaatgattctgacaggtattacaataactttatatggactttctgaagcaatttaggagctataagccatatttataatttctgaagaaataactaagcagtaagtctttttgtttagactagtcatagcatggatttatttattttaagcgagaaaatcaatctttaaaatgaccaacgtgctatagaactatagatactggaaagtgataaaaccccggtcacaatttcttgacctaacgcaccatatactctggctatagcttgttagttttaaaaagaaccatgtgaaaaatttgtgctctagtttcacttgtgcatacagaatagtaaattcaaagagaaatgaaccctttataatttggtagagtaattcaagaaagagaagaaataaagaaaagaaagaaatgtacctttattaggcacagttgatttctcataaagagttaattgtaggaagaaaggtaaaaggaagaacgattgcaattgatgccacaattgccttataaaccaaggtagacaaatttgaatttattagatgaacaactatgtgtttcatggacacacgatccatgatttgataaagcccaacacttatggggaatggtcatatgatttccatactctcataacagcacttctttattgttactgtgtgctattaacattcactttaaactttcatggtaggactagcccacaacctcacattgtccatagaggctaccttctgtgtagtggtgagggttagttccatgttggaacatgagtagtactatcatgttatacttgagggtcttaatgtttactgctgagggttttaatgcaacaactgtgagctaacctgtttgagtgaaatgaggacgaaatcccatgtgagttgctctctgtccgcaggcttatcttgcatgcgggctgtgcacttgtgaatttgagccctagtgtgctaaaacttaattatttctttataatcaaccaaaatcacattcttattttgcatacttgtgaaaatctattttcatatacatattctagataaaccttagaactgtacttgtggtagaattacacaatttcattcatttcttacaagtcctaacgtgtcatctcagcatactgttcaaacggtgagcaaataattgctttctattagtagtttgtatgcactattaattttttttctcaattttcaaccacttgaacatgttgaaacatgctctgggattgtaaaggtctttctagcaattgcattggaatatactctttaaatgatgatggttaaaatatttatattacagtggcaatgcgataagtgatgaagagatactaaaggtagcttggatgattgtcccatttggcatcttagtttcctttatcagcagcttatttgtgttgagggtaaagaaattgcggttatccgatacctatgctaaagctacattaattatcggtaagctttgtattaaccaagtttctgtacaagctttgtgtatttgtcctgaatatggtgactgatatttcatttagtataaattcgtcagagtgaatgagtcagttgattgaggataagctctttggaatgaatgaatcagttgattaagttagaatattccacatattaactcgttagtggtgctgaaatattatatcttccatgcaattgttgaacacctggctcttgatcaataaaatggagatgagcattcatgcaagcatacagttatttgtagcatttcaagatggtccttttagacatttatctatttgtttttctatttggatatgatctataaaagcacggctatgaatggctttgtctttcctgtttgtatgatatcactccacatgttttgccttatttttttcatattgtgtgacttctgtccactttcctcacgttgagagctaatgtatttagttgattcaatatgacagcatttgcttgcgtactggagctactggcagaacctctgtatattctctcccagaggaagaaatactatcaaataagagtgtatactgaacctgtggctactctgctgcgttgtttaacaacttttatcttcataacaaaaggacattctaaaatggtaacagcagaggtttttactctattgacgttctattcaacttattatgcactttctgtctcagtttgttatcactgataaaataaaatgcttaagttcacattgtttttgttgtttacacctgatactggtatagccatctatttggttatggttacattgtgaaagctagcaaatcaaaaagttccattgccaatttcatattgtgttcttttggtccatgcaccaaagaaaataacttggtgtgagatttctctcttagctacatttgttcagggttaacaggatgtgggttagagaggattaacttaatcaggttgtgacattttaactttattaattaggattaagttaacccacaaaaaaagtgaatatgataacatagaacaactaaacctctttagagttctatttttccaaatataagtgtataatctggctaaccatctaatctagccaaacaaagtcttagactgaccattctaattgccaaatcgaacaattaagctatatgtattttagacttatagtgttacttaatctagttattttcaactttaagcagatcaccttatgtttttttggttggttatgcctccattgtaaattccatgttaagttcgtctttgacaataataggactttacaaaacaaaaatatgaattctgctgagtgatatgtccaagtaatcttttctttctttacttttcaattaattggtgttcatctcatgtcattcttttcttattcaattgttgatcaacacaacacaaaaacaataatttatttcttgcaggaaaagttggttgtatttgctttgtcacaggttgtctatgcagcttgcattttctttggatattggacctattttcttatatttacaaataccaaaatttccgatctccttccattcaggttccttctatgtctgcctttgcattgtgttgtatcattaggttttgtttgatccatcacatgtttatgtttgtttccacttgatgttaaaacaaacaaattgtcaggttgtcagccatgatggactgcgataaacagttgttgcacatgtgcatgttgtttacaggacagactttcaggaaactgatgctccaagaaggcgaaaagtttgttcttgtttggtttgatactccatataaccaggctgcctatggtcttgtggataaattaggtaagtatgccgaccgctgtttgtttcagatcctttttatcttctaatgttgccgggtatgtgcaattcatgttttgtttatttgcagggagtctggttgttagaatagttttcctgccattcgaggagagttcttatgctacatttgcacagttggcatcaggttcttctgcatttacttcatttagatatgagaatcacattccttatccctttggtgtctgaacttgaaagtttctctgtgaagttttgtctaacatctctttgattggttattcaatgaaaattaacctatgttggctgggcaggcattgcaccaaacatggcagttcatccttttttttttttttaaaaaaaagagtttatttttttatactcctttcagaaattgtaactttggtatgtttcttgattatttgatccttacaatttagacttgatcattttccatatttcttactgcctgaaaatatatcttttggtattattgttgtttcatattgcagctttaagatacgataacttttccttgaaatgttgatttgaccaacaccagaattcatagcaatattgtttatttcaaaacaatatgttccacgcatatgtttagatgtatatttctgtaaaagctctaataatgggccttttatccacaggacaaaatccccagaatatatccaatttggaaggttctttgctcggagctcttaagcttattatgctgataggtttgttatccaatgttgaatgctatattgattgcatttgcgtgtgttatttactgtgtcctcttagggagtaagaagcaagcaattgcagtacatgtagtgtacagtaaacatgtttagtagctaccaactttattctctacgttctcattcgaatacagtcatccttaaagtgtcctaactttgcaggcttggtggtcatctcatttggtccaagttattcatatacccttcttagactactttatggggcaagatacagtgatggagatgctacagttattcttcgttactattgtttctacgtcatatgcttagcaatgaatggtttgtacttactacttctatttaccagttatatcatagtagagcaatgtttttgtacagtattactgtcttcatgcttaaattatgtattaaaaaaaatctgaaatgatgaactgtagttgacctttttgaattgagttagtgtaccaacaagtagcattgcttcttgtgttgatcaatagttagctatacttgatgatgtgttctatatttaaaaattgcacatattagcctttatacaaccatgtaattgggcatgagtaacacattcaattgattcctcatgaggatgcaatattgagttgcactgattatgttaatgtgtactttcaggcacatctgaagctttccttcatgctgttgcaaatgaagacaagcttaagcagtcaaatgatatgttgctcctgttctcggcaatttacattgtgctaaatgttgtcctgattaaatctgctggtgcagttgggttgattgctgcaaattccatcagtatcctttggttaatcactaccatcttatttcctttaaagtatcttttaagaactttctttgtgccttgactgtttgtaaagatatgctgctgcgaatcacatattcagcggcattcattaaagactatttcaaggtaagaggttcggttgatgtttcacatagtttgttttagtttctgttctaacaaaaatacctgatgactttattttacagggctcattctctttccgccactgcttgccggcaggctggggtgtgttgctcatttctggcctgaccacagctttctctgaaaggatgtttctgaatagaaacaggttcaagcagacccttcccattcacatggcgataggcataatgtgcctgggtttctcatcactcgagatgtaagaacaccatttcataaaaaaaaaatgtctcgctctttttatatgctataatataataatcaccttggcattcgtttctcattcaacagataccgtggtgaaaagcagttcttgacgagtataatcagatcattgaagagccgcgacaaacttgcatgagtctaacaacattcagggttttgcgagtgtttttagcattcgcctgataaccgcattttcagaaagaaaacatatacgatgccgtaaatataattgtacattgcatgggttgacgacagaagataattatgccaagcggctggaggacttcactgaacatggatcaaactggtcgcgttctctactggagtcgggttaatggtgtgtgcagcagaacaactgttcactaaacggcaacagaaagcatagatcagtggcttatataggcaatttattatcttattctgtagtaactgctgactacaccaaaatctaagggtgttaagagaaaaattgattatattttgttacagctaaaatatactccctctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0486100, RefSeq:Os07g0486100