Difference between revisions of "Os07g0497000"

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(Created page with "{{JaponicaGene| GeneName = Os07g0497000| Description = Similar to Mi-2 autoantigen-like protein (Helicase-like protein)| Version = NM_001066240.1 GI:115472212 GeneID:434329...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0497000|
 
GeneName = Os07g0497000|

Revision as of 20:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0497000

Description

Similar to Mi-2 autoantigen-like protein (Helicase-like protein)

Version

NM_001066240.1 GI:115472212 GeneID:4343299

Length

8411 bp

Definition

Oryza sativa Japonica Group Os07g0497000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19285640..19294050

Sequence Coding Region

19291140..19291195,19291899..19292070,19292410..19294050

Expression

GEO Profiles:Os07g0497000

Genome Context

<gbrowseImage1> name=NC_008400:19285640..19294050 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19285640..19294050 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gagatgggtcttggaaagactgtgtctgcctgtgcttttctatcatccctatgttgtgaatataagattaacttgccatgtcttgtcttggttcctctttctactatgcccaactggatggctgaatttgcatcatgggcacctcatttaaatgttgtggagtatcatggttctgcacgggcaagatctattattcgtcaatatgagtggcatgagggtgatgcaagccagatgggtaaaatcaagaaatctcataagttcaatgtattgctcactacttatgaaatggtgcttgttgatgctgcatatcttcggtctgtgtcatgggaggttcttatagtcgatgagggtcatcgtctgaagaattctagcagcaaacttttcagtttactcaatacattatcatttcagcatagagttttgctgactggaactccgttacagaataacattggtgaaatgtataacttattgaacttcttacaacctgcttctttcccttctctagcttcatttgaggagaaattcaatgaccttacaacaacagagaaagtggaggagctgaagaaccttgtagctccacatatgcttcgaagactgaaaaaggatgcaatgcaaaatatccctccaaagactgaacgaatggtgcctgttgaattgacatcaatccaggctgaatactaccgtgctatgcttacaaagaactaccaagtattgcgcaatattgggaaaggtggtgctcaccagtcattgttgaacatagtaatgcaacttcggaaagtctgcaatcatccgtatcttattcctggaactgaacctgaatcaggatcaccagagttcttgcatgaaatgcgaataaaggcctcagcaaagttaactttgttgcactctatgcttaaaatcctacacaaggatggtcatcgagttcttattttttctcagatgacaaagcttcttgacatccttgaagattacctgacttgggagtttggtccgaaaacatttgaaagagtggatggttcagtatctgtggcagaacgccaggcagcaattgctcgttttaatcaggacaagagtcgttttgtattcctgctatctacgcggtcatgtgggcttggaattaatttggcaactgcagatactgttatcatatatgattctgatttcaatccacatgctgatatacaggcaatgaacagagcacacagaattggacagtcaaacagacttttagtttacaggcttgtcgtgcgtgctagtgttgaggagcgtatcttgcaccttgcgaagaaaaaattgatgcttgatcaactttttgttaacaaatcagaatcacagaaggaagtggaagatatcattcgctggggaacagaggaactcttcaggaatagcgatgttgcagttaaagataataatgaagcttctggtgctaaaaatgatgtagcagaggttgagtttaagcataaaagaaaaactggtggactaggcgatgtttatgaagacagatgtgctgatggttctgctaaatttatttgggatgaaaatgctatcacaaagcttcttgacagatccaacgttccatcaacagtagctgaaagcactgatggggacttggacaatgatatgcttggcactgtaaagtcaatagattggaacgatgagctgaatgatgaccctggtgccaccgaggacatcccaaatattgataatgatggttgcgagcaggcatctgaagcaaagcaggatgcagctaatcgtgttgaagaaaatgaatgggataaactcttacgtgtcaggtgctgcactataccatatgggagcagtatcaaactgaggaggaagcatctcttggtcgaggtaagcgtttaa</cdnaseq>

Protein Sequence

<aaseq>EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFA SWAPHLNVVEYHGSARARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAA YLRSVSWEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNF LQPASFPSLASFEEKFNDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPV ELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESG SPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKT FERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPH ADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVNKSESQKEVE DIIRWGTEELFRNSDVAVKDNNEASGAKNDVAEVEFKHKRKTGGLGDVYEDRCADGSA KFIWDENAITKLLDRSNVPSTVAESTDGDLDNDMLGTVKSIDWNDELNDDPGATEDIP NIDNDGCEQASEAKQDAANRVEENEWDKLLRVRCCTIPYGSSIKLRRKHLLVEVSV</aaseq>

Gene Sequence

<dnaseqindica>2856..2911#1981..2152#1..1641#gagatgggtcttggaaagactgtgtctgcctgtgcttttctatcatccctatgttgtgaatataagattaacttgccatgtcttgtcttggttcctctttctactatgcccaactggatggctgaatttgcatcatgggcacctcatttaaatgttgtggagtatcatggttctgcacgggcaagatctattattcgtcaatatgagtggcatgagggtgatgcaagccagatgggtaaaatcaagaaatctcataagttcaatgtattgctcactacttatgaaatggtgcttgttgatgctgcatatcttcggtctgtgtcatgggaggttcttatagtcgatgagggtcatcgtctgaagaattctagcagcaaacttttcagtttactcaatacattatcatttcagcatagagttttgctgactggaactccgttacagaataacattggtgaaatgtataacttattgaacttcttacaacctgcttctttcccttctctagcttcatttgaggagaaattcaatgaccttacaacaacagagaaagtggaggagctgaagaaccttgtagctccacatatgcttcgaagactgaaaaaggatgcaatgcaaaatatccctccaaagactgaacgaatggtgcctgttgaattgacatcaatccaggctgaatactaccgtgctatgcttacaaagaactaccaagtattgcgcaatattgggaaaggtggtgctcaccagtcattgttgaacatagtaatgcaacttcggaaagtctgcaatcatccgtatcttattcctggaactgaacctgaatcaggatcaccagagttcttgcatgaaatgcgaataaaggcctcagcaaagttaactttgttgcactctatgcttaaaatcctacacaaggatggtcatcgagttcttattttttctcagatgacaaagcttcttgacatccttgaagattacctgacttgggagtttggtccgaaaacatttgaaagagtggatggttcagtatctgtggcagaacgccaggcagcaattgctcgttttaatcaggacaagagtcgttttgtattcctgctatctacgcggtcatgtgggcttggaattaatttggcaactgcagatactgttatcatatatgattctgatttcaatccacatgctgatatacaggcaatgaacagagcacacagaattggacagtcaaacagacttttagtttacaggcttgtcgtgcgtgctagtgttgaggagcgtatcttgcaccttgcgaagaaaaaattgatgcttgatcaactttttgttaacaaatcagaatcacagaaggaagtggaagatatcattcgctggggaacagaggaactcttcaggaatagcgatgttgcagttaaagataataatgaagcttctggtgctaaaaatgatgtagcagaggttgagtttaagcataaaagaaaaactggtggactaggcgatgtttatgaagacagatgtgctgatggttctgctaaatttatttgggatgaaaatgctatcacaaagcttcttgacagatccaacgttccatcaacagtagctgaaagcactgatggggacttggacaatgatatgcttggcactgtaaaggtaatttaatttgtgtaccttctttttaaataattgactactcatgcaatgaattgtgatatctagaatgccatcttgtctgtgtgtcaccaaaaaatagtgttttacttaaaggaagtttctaatcattttttctcaattaaactttttttgtttatgtccagttacagacaaatttctacactaatttagatctttaatttcttagaccacttttaaccattgcattttttttctgtatggtactgtccatcatattctgatgtatgttatactttgtgcaatcaataacttctctgtgtggttcttaattaattctcttttaaacccatttatcagtcaatagattggaacgatgagctgaatgatgaccctggtgccaccgaggacatcccaaatattgataatgatggttgcgagcaggcatctgaagcaaagcaggatgcagctaatcgtgttgaagaaaatgaatgggataaactcttacgtgtcaggtgctgcactataccatgtacttgttcttcctcttggcttatgatggtcttaatttataatttttttcttgtttacttcgtaactttacatgccagaaaataaacatgatggacgaataaatactccaagcctagaatttaagaaactgaataagttaagacacgccacatctcagcttatgaaatttcatttctcttagtcttttccagtggattcaaatttgtggtagcacaaatccctacttttgggaggcgcatgatgcactacttagagtcatgcgaaacaaatgtggacaagtgccttctgttcaccaaaacctcatctgacctttcaaaaatttccacagccaccatttcttgtttctacttaaacactaccatcattctttttctgatgtttaggtctttaggacatcgatccggctccaacacaaatgtttgatcattgtcttttttaatcatatattcataaaagatattgaaaatataaccacatgaaattattttcatgaaaaatctactcatatgagtcacatatcaaatcttaatatttttggatttattagcgagttaagatttcaaggtttgactgcagcacgccttctaaaacatcatctaatttagaacagatggagtagaaggtgaggccacgaaatgcaatcatagtagctttactggttgcagctaactctctctctctctctctctctctcatctcagatgggagcagtatcaaactgaggaggaagcatctcttggtcgaggtaagcgtttaaggaaggctgtttcttacagggaaacatttgcaaccattcctaatgaagctttaagcgaggtaattctgcattttgaccttgttctgcatttattttctgttgatcagttagcaatgctggttcataagttaatttactgtgttactaccttctgcataaaaaaatatgcttgcctaaatatcctgtaagggatctgttctcctagctaacgagcataaatttatctttgcatttttgtccaccgtggtccacttattgtggcatataattgctgcaaccctatgaacattgagctttgcaacttttgctttctctataagtgcataaactattcaaagtatgccttatgaggctctctgaatatatatatatatatatatatatatatatatatatatatatattgcaacattttgaatctgtaagtcaaaaattgtaccacaatccccacataactgaatttttcatgcgccattttgattttcttgatttgttcctctctgctattcactcatgcctattgaatactttccgtccaccacacagatggaaatctgaggtggcacttaacggatgccacaatagactattaataattgccaaatgacctactgttctctttacttggagtcatgatgagataatcacaattactcagcgataagccgcctccttgtgggcataaccagaggagagggggagaggagggggataagttcgccctggaaacctaggtggcggcacttccatcctaccacggatctgcgcttccctcctcccctttgcggcaccaccgcatcctcttccttgtccttcatcaccttctccacctcgtccctgtttcccagcaaagtactcttctactcccatctttcctctgctttatgctgatttgttcttctccctccatgcttccttcctatcttctttctggtgtgctgccgagccgccaccttcactactttaggcggcggcggcagctcgcttcctgctagtgcacctgcattagggtgagagggagagggtgctttaaatgggctattgtgctggggtttactgcgcaatactatagtgtgctgtgagtggcttaatgtaatttaggcccatatcttctctctctctctctctctcaaaattgtgtaatctgtacatctgatcacttaggctgaattgctgaaaggcaggggtgggtgctttgcattgccaccgtaacaacgatgagaatgctttcctaagtcctcataccctcacccctttacattttcatacacaggacaccaaacccttaacaacagacacaattcaaatgatttatgggagctctttgtagttttagtttgtgttaacatagttcaaaaaataattttgcaataaattactctttattatgggctctttgatgaattactactaaataatttcattttgtgggatttatcctatgtaattctacagacacatgataacatgtgaattcctgtgaccctgcaggactcacttttcttatttatgtacgattttggaaaatcggctagttagggctattcaagggggatatgattttggtagtgttgttctttagagcttgacaaagcatgttaatagctgtaatgttgaattgttatggcaaatgggaacgacagtctgagctgtgggcatcatatagctttaaaatcgagatagtgtgtgtgttcagtctaccactcatgttcacgttctcaaaatcaggctttccgttgaaaaaagtaaaaccaatgcctactttagtgtcttggagaatcaaatgaacagttgaaacttgcttatatttgaaagcttatgtgttccctgataattcagatatataccagagttccctgaatagtttaatctcccatgagtaatattgcgtgcattcaatataaatgtaatattcagagacttccgcagatatgttactgcagtgcagtttttaatttgctatttgccttgcactcttatattcacaatagttttgagtcatggtttcatgatttgctggcattggtataggactctgatgaggaggatgaaccaaagcgagaatacactgcagctggactggctttgaaggaaaaatagtatgctatctatccctttatctccctccctctccctcatgctaaggctggggattcctatacttactttcgcatgtgcccttatcatcaggcattgatttacttctgattgtaacagtgaaaaactccgagctagacaaaaggaaaggattgctcagcgccatgtgattaagaattatgctgatgacagacttgaagaattcatgaaactatatgattccagtgcaaatcccttgagaattgtagaagatcccaatcctgtgcagccatctggggctaaacgtctcggtgaatcaactgcagaaatgaagcaatcctcgaagaaaaccaagagatatcctgaaattcctcaagagctttatgccaagcttactggcaatgctgcttcatcaaaacatcacccaaaggcagcagatatctccaattcaggaactccacatcaccttttacctgttcttggcctttgtgctccaaatgctgatcagatgaactcatataaagggtcagtttgtgggccaagcacaaaggagcaaaaaagagctagtggtgaactagccaacaaaccgctgttgactcctgctgttgatcattctagcgaacaaaaacatgatggccaaccaactccttgtaagcctatgtttcctggttcctccgaggagactttgcgaaggctgaataatatcattccagacagttacttccccttccaacctgtatgtcctcttctttctttggtagcatattatttcatctagttgctttatcgttgttcatgctttttcttcaaaagtgaaaaatataagatagttgtccactttatacttattaggaggaaatggtgcaacctaccctgatattagtttttaaaatattttttatggatgcaaaattgggaaaaaaagaatccattcttgagtacagcatatatgatgttttatctagttaagagcatcattaaagaaaaagaatgacaaggtttttgtgtgcagattcctcctatatccgggaaggggattggtgatcatgtagaaaatcctgtatcgtccattccttcatttcaagggaaactgggtcttcctaattttagtctggaagacagtattccacttaagcatttgaagtcagtaccggatctatttcccaacttgtctttgggcactagcaatgaatatcttcgtaattgtgtcccagaattgccaaatagttcatttctaccaagctttatggcagatattgctggaacttcaaagcagaagaacaagttcatggcagatatgtctggccttcttccaggtttggcaatcaacccagttcaacaaatccattcgtccatgcctgaaaatcataagaaggtcttggacaaattaatgatgcgtgctcagtactcctcaagcaagttcttgaagaatgcctcaaataaattcctgaagaagagtttaaaaccagactattggtcagaagatgaactcgatgctttgtggattggggttcgcaggcatggaagaggaaattgggaggccatgcttagagatccaaagctgaagtttttgagccaccgatctcatgaagagctggcctcaagatggattttggaggagcagaaaattatagaggaaccaatgcctacagccaccagaagctccaactctacatcatttcctggcatatcggatgcaatgatgtctcgggcacttaatggaagtagcttttccaaactgaggatggagccgccaaagttgcagtcccacctaactgacattcagttaggttgcaatgatataccaaccagattttctcatgttgagcccactaattacatgaatttaagtgagggtggtccatcactgacaccgtggcaggatttcaaaaatagatcaggacacagtggagattttcctggcccacttgacaagtgggagaaacctgatatggggttgatcccaccatttatgccgaatccttttatgaaggaaagcattgggtcactgcccataaacagacacagcagtaattccattcagcagaatgaagttggatcaagttctcatgagagcatacttcatggtttttcggacggacaggccaaattattccatgagatgcaacggcgtgtgaagttagggaaattacccattgagatgaatctgaatcacacaaagctgtcagatcctctagctgagaactctggtgattttgaaagttcaaaaccgaacaagctaccgcactggcttcaggaggctgtgcgtgcacctccatccaagccacctgaatgtgagctaccagcaactgtttcagctattgctcagtctgtgtgcctactacttggagagcaaaaaccagcaatacctccattcccgattccaggacctcgtctctctctccccaaggacccaaggagtgctccaaagaagaggagagttcacaaagttcagcaagcttcctccctggtagatcattccaaaactacagttgggcaaggtgaccacaactctactccgtcagcaccactatccatggaagccgcacctgcctctcctgcagttattaaaagcagtgataccccctcgctcaacttgaactcaccatcttcatcatcagctggcagtcgggggcaggatgcgtcaaccccttccacttttgaagaaccagaaagaaccatggaagtttcagaacctgcttctgtcgctgctgccacttgcccgtccaggccagagcctcctgagactggtactcacagaatcgagttctccgcggtagatgacatggatactggatcttgtagatcacctgtgagggatactcctgaccctgacaatcagaagagcgaattgtctggatcaggtaatacacctactgaactttctgtattaccgttggttgatgcacctgggacgagcagcgaacctgctgtagtgcccgtatccagcgacgaggagtcaacccaagagggtgtaccaggcaaagccgtaagcaccggcgaccaggagaaacggacgccccctgatgagagcgaaaattcaggtgcggcaaatccagtttcggcagctcagacagctgacgaagataaggtggacgagatgatcacagatgagcattagaacttttgagcaatgagctcaaatgcttatttttcttccatttagcgctgggattttccctttcccaatggtttccagtgtgtggaggtatcaggtacctgccttttgtgtttgtatgcttagcccagaatccagatagagtaaaaatccagggactagtagtttagccctctagtccagcgggagcaaactctcgaaagcctctatatacatgaagtgtatattttcagacatggtaccttggacatggacaagtattcatttatttatgcgtgtatgatttagatagtccgtttaccaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0497000, RefSeq:Os07g0497000