Difference between revisions of "Os07g0553633"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0553633| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001188323.1 GI:297725776 GeneID:926935...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0553633|
 
GeneName = Os07g0553633|

Revision as of 20:38, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0553633

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001188323.1 GI:297725776 GeneID:9269356

Length

2762 bp

Definition

Oryza sativa Japonica Group Os07g0553633, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22697120..22699881

Sequence Coding Region

22697318..22699792

Expression

GEO Profiles:Os07g0553633

Genome Context

<gbrowseImage1> name=NC_008400:22697120..22699881 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22697120..22699881 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctgtcttcttcctcctcctcttcagccaaatctttctctgcaccgcagtggacaccatcaactccaccacgccgctgtccgggacgcagaagatcgtctccaagggcggcaggttcgcccttggattctacaccccgccacaaggtaacaacaccgcctccggcaccggcaactactacatagctatatggtacaacaacataccgttgcagacgacggtgtggacggccaacagcgacgtgccggtgtctgacccgaccaccgcatccttgtccatcggcagcgatggcaatcttgtcctccttgatcaatccaagaacaggcagctgtggtcgaccaacgtaagtgtggcctccaactccaccgttgccgtcatccaggacggcggtagcctcgacctcatggatgccaccaattcatccatagtctactggaggagcatagatcatccgacaaacacctggcttccgggcggcaagctggggctgaacaagaccactggtgtgagccagcggcttgtgccatggaggaacaatgcaaacccgtcccctgggctgttctcccttgagctggatcccaacggcacaacgcagtacttcatccagtggaacgactccatcacttactggaccagcggcccttggaacggtaatatcttcagtcttgtgcccgagatgacggccggctacaactacaacttccggttcattaacaatgtctcggagagctacttcatatactccatgaaggatgactcgatcatctcgcggttcaccattgatgtgaatgggcagatcaagcagtggacatgggtaccagcctcggagaattggatcttgttctggtcccagccacggacgcagtgtgaggtgtacgggctctgcggcgcatatggaagttgcaacctcaatgtcctgccgttctgcaactgcatcaaggggttcagccagaagtttcagagtgattgggacctccaggattttactggtgggtgcaagagaaacgtaccgttgcagtgccagaccaactcaagctctgcacagactcagcctgataagttctattccatggttagtgtgaggctacctgataatgctcagagtgcagtggccgctagttctcaggcctgtcaggttgcttgcctgaataattgctcctgtaatgcttacacttacaatagtagtggctgctttgtttggcatggggacttgattaacctccaagaccaatacaatgggaatggaggaggcacactcttcctcaggcttgcagcgtctgaacttccagactctaaaaagagcaagaaaatgatcattggtgcagttgtaggtggagttgctgcagctttgataatccttgcaattgtgttgttcatcgtattccagaaatgccgccgagacaggactcttcgcatatccaagactacagggggcgcactgattgccttccggtacagtgatctgcagcatgtcaccagcaacttctcagagaagctgggtggaggtgcctttggcacagtatttaaagggaagctcccagattcaacagccattgcagtgaagaggcttgatggactgagccagggggagaagcaattccgtgctgaggtaagcaccatcgggaccatccaacatgtcaatctggttcgcctacttggtttctgctctgaaggatcaagaagactgcttgtctatgagtacatgccaaagggctccctggaattgcagctgttccatggtgagacaacggcactgaactgggccataaggtatcaaattgcacttggaacagcaaggggcctaaattacctgcatgaaaaatgtagggattgcataatacactgtgatgttaagccagataacatacttttggatgagtcatttgtacccaaagtgtctgactttggtctagcaaagctcttagggcgggatttcagccgtgttttgacaacaatgagagggacaaggggttaccttgcgcctgagtggatcagtggtgtgccgattactcctaaggcagatgtcttcagctatggcatgatgctcttcgaactcatatcaggcagaaggaatgctgatctaggggaggagggaaagtcctctttcttcccaactttggctgtaaacaaactccaggaaggtgatgtgcagaccttgttagaccccaggttgaatggagatgccagtgctgatgagctcacaaaagcttgcaaggttgcctgctggtgtatccaagatgatgaaaatggcagacctacaatgggtcaggtcgtccaaattttagagggattccttgatgtcaacatgcctcctgttccaaggtcactgaaggttcttgatgaaagccctgatgtcataaattttttctcagatgtttcatcaagtcaaacttcgcagatgcataatagcacagcttcttcgcagacaaagagttctacttcaggtggttcacaatttcagagcacataa</cdnaseq>

Protein Sequence

<aaseq>MAPVFFLLLFSQIFLCTAVDTINSTTPLSGTQKIVSKGGRFALG FYTPPQGNNTASGTGNYYIAIWYNNIPLQTTVWTANSDVPVSDPTTASLSIGSDGNLV LLDQSKNRQLWSTNVSVASNSTVAVIQDGGSLDLMDATNSSIVYWRSIDHPTNTWLPG GKLGLNKTTGVSQRLVPWRNNANPSPGLFSLELDPNGTTQYFIQWNDSITYWTSGPWN GNIFSLVPEMTAGYNYNFRFINNVSESYFIYSMKDDSIISRFTIDVNGQIKQWTWVPA SENWILFWSQPRTQCEVYGLCGAYGSCNLNVLPFCNCIKGFSQKFQSDWDLQDFTGGC KRNVPLQCQTNSSSAQTQPDKFYSMVSVRLPDNAQSAVAASSQACQVACLNNCSCNAY TYNSSGCFVWHGDLINLQDQYNGNGGGTLFLRLAASELPDSKKSKKMIIGAVVGGVAA ALIILAIVLFIVFQKCRRDRTLRISKTTGGALIAFRYSDLQHVTSNFSEKLGGGAFGT VFKGKLPDSTAIAVKRLDGLSQGEKQFRAEVSTIGTIQHVNLVRLLGFCSEGSRRLLV YEYMPKGSLELQLFHGETTALNWAIRYQIALGTARGLNYLHEKCRDCIIHCDVKPDNI LLDESFVPKVSDFGLAKLLGRDFSRVLTTMRGTRGYLAPEWISGVPITPKADVFSYGM MLFELISGRRNADLGEEGKSSFFPTLAVNKLQEGDVQTLLDPRLNGDASADELTKACK VACWCIQDDENGRPTMGQVVQILEGFLDVNMPPVPRSLKVLDESPDVINFFSDVSSSQ TSQMHNSTASSQTKSSTSGGSQFQST</aaseq>

Gene Sequence

<dnaseqindica>90..2564#aaccaccataatcaaattactccaaaggccaagctcagcttccattcgtcccaggttctcagccctggctgctctgccaagatccatccatggctcctgtcttcttcctcctcctcttcagccaaatctttctctgcaccgcagtggacaccatcaactccaccacgccgctgtccgggacgcagaagatcgtctccaagggcggcaggttcgcccttggattctacaccccgccacaaggtaacaacaccgcctccggcaccggcaactactacatagctatatggtacaacaacataccgttgcagacgacggtgtggacggccaacagcgacgtgccggtgtctgacccgaccaccgcatccttgtccatcggcagcgatggcaatcttgtcctccttgatcaatccaagaacaggcagctgtggtcgaccaacgtaagtgtggcctccaactccaccgttgccgtcatccaggacggcggtagcctcgacctcatggatgccaccaattcatccatagtctactggaggagcatagatcatccgacaaacacctggcttccgggcggcaagctggggctgaacaagaccactggtgtgagccagcggcttgtgccatggaggaacaatgcaaacccgtcccctgggctgttctcccttgagctggatcccaacggcacaacgcagtacttcatccagtggaacgactccatcacttactggaccagcggcccttggaacggtaatatcttcagtcttgtgcccgagatgacggccggctacaactacaacttccggttcattaacaatgtctcggagagctacttcatatactccatgaaggatgactcgatcatctcgcggttcaccattgatgtgaatgggcagatcaagcagtggacatgggtaccagcctcggagaattggatcttgttctggtcccagccacggacgcagtgtgaggtgtacgggctctgcggcgcatatggaagttgcaacctcaatgtcctgccgttctgcaactgcatcaaggggttcagccagaagtttcagagtgattgggacctccaggattttactggtgggtgcaagagaaacgtaccgttgcagtgccagaccaactcaagctctgcacagactcagcctgataagttctattccatggttagtgtgaggctacctgataatgctcagagtgcagtggccgctagttctcaggcctgtcaggttgcttgcctgaataattgctcctgtaatgcttacacttacaatagtagtggctgctttgtttggcatggggacttgattaacctccaagaccaatacaatgggaatggaggaggcacactcttcctcaggcttgcagcgtctgaacttccagactctaaaaagagcaagaaaatgatcattggtgcagttgtaggtggagttgctgcagctttgataatccttgcaattgtgttgttcatcgtattccagaaatgccgccgagacaggactcttcgcatatccaagactacagggggcgcactgattgccttccggtacagtgatctgcagcatgtcaccagcaacttctcagagaagctgggtggaggtgcctttggcacagtatttaaagggaagctcccagattcaacagccattgcagtgaagaggcttgatggactgagccagggggagaagcaattccgtgctgaggtaagcaccatcgggaccatccaacatgtcaatctggttcgcctacttggtttctgctctgaaggatcaagaagactgcttgtctatgagtacatgccaaagggctccctggaattgcagctgttccatggtgagacaacggcactgaactgggccataaggtatcaaattgcacttggaacagcaaggggcctaaattacctgcatgaaaaatgtagggattgcataatacactgtgatgttaagccagataacatacttttggatgagtcatttgtacccaaagtgtctgactttggtctagcaaagctcttagggcgggatttcagccgtgttttgacaacaatgagagggacaaggggttaccttgcgcctgagtggatcagtggtgtgccgattactcctaaggcagatgtcttcagctatggcatgatgctcttcgaactcatatcaggcagaaggaatgctgatctaggggaggagggaaagtcctctttcttcccaactttggctgtaaacaaactccaggaaggtgatgtgcagaccttgttagaccccaggttgaatggagatgccagtgctgatgagctcacaaaagcttgcaaggttgcctgctggtgtatccaagatgatgaaaatggcagacctacaatgggtcaggtcgtccaaattttagagggattccttgatgtcaacatgcctcctgttccaaggtcactgaaggttcttgatgaaagccctgatgtcataaattttttctcagatgtttcatcaagtcaaacttcgcagatgcataatagcacagcttcttcgcagacaaagagttctacttcaggtggttcacaatttcagagcacataaatcagaaaatcctgaatttgattagggaaagacatttacgtatttgagagtaatatgagtgactcatgttgtacatatgctatgcttttctgtagttctgtagttccatgccttctgtatattaatagcacataattgagctatcacgaactaacacattgagccatccaccatgtattagaatttttatgtttaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0553633, RefSeq:Os07g0553633