Difference between revisions of "Os07g0563700"
(Created page with "{{JaponicaGene|
GeneName = Os07g0563700|
Description = IKI3 family protein|
Version = NM_001066533.1 GI:115472798 GeneID:4343611|
Length = 5749 bp|
Definition = Oryza sat...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os07g0563700| | GeneName = Os07g0563700| | ||
Revision as of 20:38, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0563700 |
|---|---|
| Description |
IKI3 family protein |
| Version |
NM_001066533.1 GI:115472798 GeneID:4343611 |
| Length |
5749 bp |
| Definition |
Oryza sativa Japonica Group Os07g0563700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:23225915..23231663 |
| Sequence Coding Region |
23226050..23226211,23226888..23227202,23227276..23230370,23230549..23230647,23230768..23231112 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:23225915..23231663 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:23225915..23231663 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagaacctaaaggtggttacccggatagcgcagaagcttcagctccagctcgacggggagaccgtggtagtctccgccgtcgacgccgagcgccgccgcgccttcttcgtctcctccgagaacttcctctactccgtcgacctccccgcccccacccagcaatcactgcaatggagcgaaagtaccctagactctgatgcagaggaggttgttcttgaacctggagattacatagttgccatggattatctaatggagaaggagtctttgctgcttggttcatcaaccggttgtctattattgtataatgtggatgagaaaactactgaagttgtgggacgactggagggtggtgtgaagaccattgcttctagtcctgatggggcccttatttctgttacgaccgggtttggacaattgctcatcatgacaaacgattgggaagtgctgtttgagacttctctcgaccctcattgtgatcttacaggtgatatcaacagtcccaatggtcacatccaaagttctatttcttggcggggtgatggaaagttttttgctactcttggtgggcttgaagggagctctcagaaacttactatttgggaacgtgaatcaggaaatatacattcttcttcagataccaaggcttttataggagcatcacttgattggatgccaagtggagccaaggttgccactgcccatgaccggaagacagagggaaagtgccctctcattgtattctatgaaaagaatggcttagaaaggagccacttttccattgatgagccagcagaggctgtcatccaagctttaaaatggaactgcaattctgaactcttagctgctctagtctcttgtggccagtatgatgttatcaaagtatggtcctgcagtaacaatcactggtacttgaaacaagaactgcgatacacaaagaaagaaggggtgaggttctattgggatcaaacaaaaccaatgcatctcatctgctggacattaggtggtcaggttattacgcacaggtttgcttggactactgctgtcagtgagacttcaattgcgcttgttattgatggttcccatgtccttgtaactcctctcagtttgggtctcatgccaccccccatgtctttgttccatcttacatttccttgtgctgtgaatgaggtttcttttctatcctataactcgaaaaaccatattgctgcttatctttctaatggcagcttgtgtgtgtcggtacttccggtggcagatacttgggaagagtttgaaggcagtggcataagtgttgacccttgcttttctgagtcaacattgaataactatatgcacctgacttggattgatacgtgtaccttgatcggcatttgttgccgcgctgatgccttctcttcaacaccaatgaggtccagtgaagctagtagccttctagagaaaaatgactcgccatattttatcaatgagattgaacttgtatgttccgaggattctttgctaggttcagcctgttcatcaggttggcaggcaaaaatatcgaagaaaatgcctctgcaggctgcagttattggaatatctcaaaatccagcaaaagaaggttcagcctttattcagttaagtggaggaagggttgttgaatactgctcaaaagtgaatttgtttagaatgtctgccccggtacaagttagtgaaacaggttccgaccatacttttccaacatcatgcccttggatgactgctgttcaatgccatgaaaatggaatggttaggacacttctctttggacttgatgatagcagcaagttgcatgtgggcaaaaggttattaagcagtaactgtagcagcttcacattctattccagtgcttatggagcaaaagagcaggttgtgacccacttgcttgtgactactaagcaggatcttttattcatcgtggatatcagtgagattttacttaaaaatggcgaagtgacaaccgatagccatatcaggagtcatcctcgaggaaagcaaagcaaagagcatatcactgtatgggaaaagggggcaaagctgattggtgttctccatggtgatgaagcagctgtcataatgcaaaccacccgtggtaacttggagtgtatctaccccaggaagctggtccttgtttcaattgttcaggcactggttcagggacgttttagagatgcatttgacatggtaaggcgccatcggattgatttcaatatggttgttgactactgtggctggaaatcttttatgaagtcagcggcagattttgttaaacaagtcaataaccttagccacatcactgaatttgtttgttcaataaagaatgagaatgtcagcagcaaattgtatgagacctacatatcatttcctgatcactgtgcaacctctgtggctgatactgtaaatactcatggtctgttgtcagacaacaaagtcacatctgtactgatggcaattcgaaaagcccttgaggtgcaggtggaagaaagctcatcaagagaactctgcatactgactactttagcccgtagcgaacctcctctgttggaggaagcactgaatagaataaaagttatccgagaactggaacttcttggggttgatgatgccaggagaaagctctacccatctgctgaagagtccctgaagcacttgctatggttaaccgaaccagaagctgtttttaatgctgctttgggactgtatgatctgaatctttctgctatagtagctttaaattcccaaaaagatccaaaagagttccttccttttctcaagagtcttgaatgccttcctcctgctattatgaagtacacagttgatttaagactcggaagatatgaaagtgctctcaagaacattgtttctgctggcgacgagtatcatgaggactgtatgaaactcctcaacgctaaccctcaattgttccctttggggctccagttattcactgacccagataaaaggcatcaaattcttgaggcatggggtgatcaactttctgaagagaaatgctttgcagatgctgcaataacttatcaatgctgttcgtcgtatcagaaatctttgaaggcgtatcgtgattgtggggattggagaggtgtgttcactgttgcaggtcttctgaagtttaaaaaggaagaaattcttcaactagcacatgacctatgtgatgagttccaagcacttgggaaacctggagatgctgctaaaatagcactggagtattgctcagatgtcgatagaggtgttggttactttatcacggcaagagaatgggaagaagctcttcgggtagcttatatgcacagcaggcaagatctggttgatactgttagagatgcagctttggaatgttctgctttgctgatttctgagtatcaggaaggattgctaaaggtgggcaaatatctggcccgttatgttgctgtacggcagaggagactgtcacttgcagccaagctccagtctgaagaccgatttatggatgttgaagacgacagcatttcagaagtcagcactagcttcagcgaaatgagtgcatataccacaaggtcaacaaaggaatctagtgcttccgtcatatctagcagtgccagcaagtcaagaggggcaaggcgacaaaagaaaggtggcaagatacgagctggaagccctggggaggagatggcacttgtggagcatctcaaagggatgtctctgacctccggtgctctaactgagcttaaaagcctacttgtggttctaatacaactgggaagagaagaaaccgcccgtcaggtgcagctggctggagacaattttgaggtatctcaaagggctgcagtcaagttggctgaggatactgtatccaacgacaagatagacgagaatgcacatacgcttgagaattacgtgaaaatgctgagagctcatcagtcagctgatagtgaaaccacctgttggcgaatcaaagcattgtcgccgccttggaccggggtatactccaattcacatgagcatgctgaatgttga</cdnaseq> |
| Protein Sequence |
<aaseq>MKNLKVVTRIAQKLQLQLDGETVVVSAVDAERRRAFFVSSENFL YSVDLPAPTQQSLQWSESTLDSDAEEVVLEPGDYIVAMDYLMEKESLLLGSSTGCLLL YNVDEKTTEVVGRLEGGVKTIASSPDGALISVTTGFGQLLIMTNDWEVLFETSLDPHC DLTGDINSPNGHIQSSISWRGDGKFFATLGGLEGSSQKLTIWERESGNIHSSSDTKAF IGASLDWMPSGAKVATAHDRKTEGKCPLIVFYEKNGLERSHFSIDEPAEAVIQALKWN CNSELLAALVSCGQYDVIKVWSCSNNHWYLKQELRYTKKEGVRFYWDQTKPMHLICWT LGGQVITHRFAWTTAVSETSIALVIDGSHVLVTPLSLGLMPPPMSLFHLTFPCAVNEV SFLSYNSKNHIAAYLSNGSLCVSVLPVADTWEEFEGSGISVDPCFSESTLNNYMHLTW IDTCTLIGICCRADAFSSTPMRSSEASSLLEKNDSPYFINEIELVCSEDSLLGSACSS GWQAKISKKMPLQAAVIGISQNPAKEGSAFIQLSGGRVVEYCSKVNLFRMSAPVQVSE TGSDHTFPTSCPWMTAVQCHENGMVRTLLFGLDDSSKLHVGKRLLSSNCSSFTFYSSA YGAKEQVVTHLLVTTKQDLLFIVDISEILLKNGEVTTDSHIRSHPRGKQSKEHITVWE KGAKLIGVLHGDEAAVIMQTTRGNLECIYPRKLVLVSIVQALVQGRFRDAFDMVRRHR IDFNMVVDYCGWKSFMKSAADFVKQVNNLSHITEFVCSIKNENVSSKLYETYISFPDH CATSVADTVNTHGLLSDNKVTSVLMAIRKALEVQVEESSSRELCILTTLARSEPPLLE EALNRIKVIRELELLGVDDARRKLYPSAEESLKHLLWLTEPEAVFNAALGLYDLNLSA IVALNSQKDPKEFLPFLKSLECLPPAIMKYTVDLRLGRYESALKNIVSAGDEYHEDCM KLLNANPQLFPLGLQLFTDPDKRHQILEAWGDQLSEEKCFADAAITYQCCSSYQKSLK AYRDCGDWRGVFTVAGLLKFKKEEILQLAHDLCDEFQALGKPGDAAKIALEYCSDVDR GVGYFITAREWEEALRVAYMHSRQDLVDTVRDAALECSALLISEYQEGLLKVGKYLAR YVAVRQRRLSLAAKLQSEDRFMDVEDDSISEVSTSFSEMSAYTTRSTKESSASVISSS ASKSRGARRQKKGGKIRAGSPGEEMALVEHLKGMSLTSGALTELKSLLVVLIQLGREE TARQVQLAGDNFEVSQRAAVKLAEDTVSNDKIDENAHTLENYVKMLRAHQSADSETTC WRIKALSPPWTGVYSNSHEHAEC</aaseq> |
| Gene Sequence |
<dnaseqindica>136..297#974..1288#1362..4456#4635..4733#4854..5198#5311..5326#acccgccgccgcggcccatcaactccggcgagctccacccgccgccctccaccctcctccctccctccgtctccgtctctccccggatctcctcccgcggccggaagggatccaccggccaccggcggcggggggatgaagaacctaaaggtggttacccggatagcgcagaagcttcagctccagctcgacggggagaccgtggtagtctccgccgtcgacgccgagcgccgccgcgccttcttcgtctcctccgagaacttcctctactccgtcgacctccccgcccccacccaggtacggttcctctgctcaccaatttgttatactgcttgaaatcttcgttttattgtttgcctcgcaacgtagcaatagtagtaccacgctcagtacaagagggatacacatattatatggtgttaatttaccatgcgtatgattctcagattccagttttttgggtcaatacacccgtttatactgctaactaaatttgggcagaacactatgattttttttttttgtacaacgaaacaaacaaacacatcatcatcttcaatttgctatggtagcactgagcgtgtaccttctaacctaaatatttgatatttaggacaagatctttttcaaacttttaaaattccaaccatcaataatttctcaaattcttagtttaaaacaaaagtaatggtgtttgtagattttccttggaaagtacttcctgcttctgtttatatacgacgtcgtcatatataaatggaaggagagtaatatcataaacttgctatattttataaactttttctagtataaattttatggttggaattttgaaagtttgatcaaatcttgtcctaaacgtcaaatatttatggccgaagggagtatataatctgtttttttagtcgatatgattattaccttttcttttgctagtatttctgttttgctgattgcctattttgtctttcagcaatcactgcaatggagcgaaagtaccctagactctgatgcagaggaggttgttcttgaacctggagattacatagttgccatggattatctaatggagaaggagtctttgctgcttggttcatcaaccggttgtctattattgtataatgtggatgagaaaactactgaagttgtgggacgactggagggtggtgtgaagaccattgcttctagtcctgatggggcccttatttctgttacgaccgggtttggacaattgctcatcatgacaaacgattgggaagtgctgtttgagacttctctcgaccctcatgtaagtttttgtttacatgatctgactaaagatatgactaaaatgttctcattctacacatgcttgtttccagtgtgatcttacaggtgatatcaacagtcccaatggtcacatccaaagttctatttcttggcggggtgatggaaagttttttgctactcttggtgggcttgaagggagctctcagaaacttactatttgggaacgtgaatcaggaaatatacattcttcttcagataccaaggcttttataggagcatcacttgattggatgccaagtggagccaaggttgccactgcccatgaccggaagacagagggaaagtgccctctcattgtattctatgaaaagaatggcttagaaaggagccacttttccattgatgagccagcagaggctgtcatccaagctttaaaatggaactgcaattctgaactcttagctgctctagtctcttgtggccagtatgatgttatcaaagtatggtcctgcagtaacaatcactggtacttgaaacaagaactgcgatacacaaagaaagaaggggtgaggttctattgggatcaaacaaaaccaatgcatctcatctgctggacattaggtggtcaggttattacgcacaggtttgcttggactactgctgtcagtgagacttcaattgcgcttgttattgatggttcccatgtccttgtaactcctctcagtttgggtctcatgccaccccccatgtctttgttccatcttacatttccttgtgctgtgaatgaggtttcttttctatcctataactcgaaaaaccatattgctgcttatctttctaatggcagcttgtgtgtgtcggtacttccggtggcagatacttgggaagagtttgaaggcagtggcataagtgttgacccttgcttttctgagtcaacattgaataactatatgcacctgacttggattgatacgtgtaccttgatcggcatttgttgccgcgctgatgccttctcttcaacaccaatgaggtccagtgaagctagtagccttctagagaaaaatgactcgccatattttatcaatgagattgaacttgtatgttccgaggattctttgctaggttcagcctgttcatcaggttggcaggcaaaaatatcgaagaaaatgcctctgcaggctgcagttattggaatatctcaaaatccagcaaaagaaggttcagcctttattcagttaagtggaggaagggttgttgaatactgctcaaaagtgaatttgtttagaatgtctgccccggtacaagttagtgaaacaggttccgaccatacttttccaacatcatgcccttggatgactgctgttcaatgccatgaaaatggaatggttaggacacttctctttggacttgatgatagcagcaagttgcatgtgggcaaaaggttattaagcagtaactgtagcagcttcacattctattccagtgcttatggagcaaaagagcaggttgtgacccacttgcttgtgactactaagcaggatcttttattcatcgtggatatcagtgagattttacttaaaaatggcgaagtgacaaccgatagccatatcaggagtcatcctcgaggaaagcaaagcaaagagcatatcactgtatgggaaaagggggcaaagctgattggtgttctccatggtgatgaagcagctgtcataatgcaaaccacccgtggtaacttggagtgtatctaccccaggaagctggtccttgtttcaattgttcaggcactggttcagggacgttttagagatgcatttgacatggtaaggcgccatcggattgatttcaatatggttgttgactactgtggctggaaatcttttatgaagtcagcggcagattttgttaaacaagtcaataaccttagccacatcactgaatttgtttgttcaataaagaatgagaatgtcagcagcaaattgtatgagacctacatatcatttcctgatcactgtgcaacctctgtggctgatactgtaaatactcatggtctgttgtcagacaacaaagtcacatctgtactgatggcaattcgaaaagcccttgaggtgcaggtggaagaaagctcatcaagagaactctgcatactgactactttagcccgtagcgaacctcctctgttggaggaagcactgaatagaataaaagttatccgagaactggaacttcttggggttgatgatgccaggagaaagctctacccatctgctgaagagtccctgaagcacttgctatggttaaccgaaccagaagctgtttttaatgctgctttgggactgtatgatctgaatctttctgctatagtagctttaaattcccaaaaagatccaaaagagttccttccttttctcaagagtcttgaatgccttcctcctgctattatgaagtacacagttgatttaagactcggaagatatgaaagtgctctcaagaacattgtttctgctggcgacgagtatcatgaggactgtatgaaactcctcaacgctaaccctcaattgttccctttggggctccagttattcactgacccagataaaaggcatcaaattcttgaggcatggggtgatcaactttctgaagagaaatgctttgcagatgctgcaataacttatcaatgctgttcgtcgtatcagaaatctttgaaggcgtatcgtgattgtggggattggagaggtgtgttcactgttgcaggtcttctgaagtttaaaaaggaagaaattcttcaactagcacatgacctatgtgatgagttccaagcacttgggaaacctggagatgctgctaaaatagcactggagtattgctcagatgtcgatagaggtgttggttactttatcacggcaagagaatgggaagaagctcttcgggtagcttatatgcacagcaggcaagatctggttgatactgttagagatgcagctttggaatgttctgctttgctgatttctgagtatcaggaaggattgctaaaggtgggcaaatatctggcccgttatgttgctgtacggcagaggagactgtcacttgcagccaagctccagtctgaagaccgatttatggatgttgaagacgacagcatttcagaagtcagcactagcttcagcgaaatgagtgcatataccacaaggtgtgtcatctgccatttttatctgcgcatcctctctgacccaattttatcttctgtttttagttctttttttcactatttagttccaagtcctcctgctttaggatcaactgaaacttcaatcaatgttgagtaacattgttgaacccatacgaaattctaaatgctgctcgtgcaggtcaacaaaggaatctagtgcttccgtcatatctagcagtgccagcaagtcaagaggggcaaggcgacaaaagaaaggtggcaagatacgagctggaaggtaggcggcttctgttgagagtttttttttttaaataaaataaaataaaatccgagtggtttcttaagacgtcaattctccgtttgttttttcaactcaccgtcaactttatttgtgcagccctggggaggagatggcacttgtggagcatctcaaagggatgtctctgacctccggtgctctaactgagcttaaaagcctacttgtggttctaatacaactgggaagagaagaaaccgcccgtcaggtgcagctggctggagacaattttgaggtatctcaaagggctgcagtcaagttggctgaggatactgtatccaacgacaagatagacgagaatgcacatacgcttgagaattacgtgaaaatgctgagagctcatcagtcagctgatagtgaaaccacctgttggcgaatcaaagcattgtcgccgccttggaccggggtatactccaattcacatgagtgagtcattattactctgttaagaataaactagtactattagcccatctttcccttcagagtaaattgacaaggagttgaccgtgttgtggttttgaaaaaacgtttacaggcatgctgaatgttgatgagtggtaagcagcggtaactgttggaatggaattgaacgagaggcctcaacaatgattgccatatcattctgtggcggctgtcaagggtaacccggctatatatcgatcgcagccaattcaggatatttatggtgttctgccacttgggtggattgttacgtcaaagtggtgaaacatttttgcttataaatcaggatgttggaggccgcagccgagcccgcttgagctttttgctgcttccatttgtggtataattttgatcgagtagttatatgcatggaggaataaaaagttacatcatctgttcatctgaaaattgggtgttgtagacttgtagtgaatagtgattgtgagacatttaactatttgccacttttaagatgtggcatttaacagttggaagaagtcgtgttgttttcc</dnaseqindica> |
| External Link(s) |
