Difference between revisions of "Os07g0608200"
(Created page with "{{JaponicaGene|
GeneName = Os07g0608200|
Description = Similar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding p...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os07g0608200| | GeneName = Os07g0608200| | ||
Revision as of 20:39, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os07g0608200 |
|---|---|
| Description |
Similar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding protein subunit A). Splice isoform Short |
| Version |
NM_001066775.1 GI:115473282 GeneID:4343866 |
| Length |
4475 bp |
| Definition |
Oryza sativa Japonica Group Os07g0608200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:25656897..25661371 |
| Sequence Coding Region |
25657203..25657565,25657944..25658111,25658678..25658746,25658828..25658934,25659583..25659733 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:25656897..25661371 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:25656897..25661371 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgctaatgcttttgcgacaaatggaagatcatcgagcccatactacgcccaactatgattttttctctggagattatcagatgaagcagttaggtcataagatgtatgatcaagattccccgtcaagcgattctggacagtcacaccaagaagaatctgccatgaatgatagcagtccaaatgagcgacatacctcaacacaatctgacaatgatgatggtcatcagatgccagatcaggacaaaacaaagtcagtatcatcgttggggaatccaggagctttgcctccaaagctcaactatagccaatcctttgcttgtattccttatacagctgatgcatactatggtggggtcttgactggatattcttcacatgcaattgttcatccccagcaaaatggtacagctaactcccgggtgccgttgcctgttgagcctgcagcagaagagccaatatttgtaaacgcaaagcagtaccatgcaattcttaggaggagacagatacgagctaaattggaggcccaaaataagttggtgaaaggtcggaagccatacctccatgaatctcggcatcgccatgccatgaagcgagctcgtggatctggagggcgcttcctcaacacaaagcagctcgaggagcagaagcagcaacaggaggaggaggccgcatccggtggcgcgagctctggcaataggacatgccttcagaatggcaccggtagcgcgccttcagcttcctctccctctgaaatcgcgagcgtctcaaccagcagagaattccttggtaaccatgagcagagccacttcccctcagctggcttccttcccacaatgagcttcagagcgcagaatggcggagatgggaagctggtcgcgaacgccattcaccagcgcgtttccatgatgaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MLMLLRQMEDHRAHTTPNYDFFSGDYQMKQLGHKMYDQDSPSSD SGQSHQEESAMNDSSPNERHTSTQSDNDDGHQMPDQDKTKSVSSLGNPGALPPKLNYS QSFACIPYTADAYYGGVLTGYSSHAIVHPQQNGTANSRVPLPVEPAAEEPIFVNAKQY HAILRRRQIRAKLEAQNKLVKGRKPYLHESRHRHAMKRARGSGGRFLNTKQLEEQKQQ QEEEAASGGASSGNRTCLQNGTGSAPSASSPSEIASVSTSREFLGNHEQSHFPSAGFL PTMSFRAQNGGDGKLVANAIHQRVSMMR</aaseq> |
| Gene Sequence |
<dnaseqindica>3807..4169#3261..3428#2626..2694#2438..2544#1639..1789#1489..1545#atagagcacagtcctctcctcttccccgtgctccccatttctgcttcttttcccacaaatttctctctctatctcggaaaggattcgggagacttgaagagaggagctcgaagcgggacaggagagagaggtacatctctatgcgcgccgctgcgctactccctcctcggagaaatccccaaattgtgttcttgcatgcgtcgtcctagtagcagagagctgtcccttccattttcctttcatggagtggattcttggttcttgattacgacatgctgtgtttggtccagttcttatcccctgcgattttttcccatttcttttctctcccttgttccacctcggaaatttgggttctttttttcttcttcttttgattcttggttggtttgtgttgcataatttcagttctttgttaggcttgcttcggagttgtagttagacatcgcaagatgcatcctttcgaggaagtcaatgcatcccctgttgttagctgaccactgtatatcgaatgcactgtgagttgtgttttaggccgtggagtgggtggaaatttgacttccccattgcaggatttggtaacttgaagctaaattccgtgtgaatttgtgacggtatcaagcgattgtgtctctgataagattctgaatgtgtgaacttgctgcgatatgttctgatttactagtggtttagcttttcaatcgttattctgattaagacaagggacttcttctgtgcatatggattggcaatttggactcgagaacaatccactaaaagttgtgtaggttatctctttatgatctgcatgtaataaatgtaaacctgagactgatgtaggctacctcttattcgagaaaaagaaaaagaggctgatgtaagctacctaatgtgcattttgtgcttattcctcttgatcaggttgtttctatataagaattttctgtctgtctacttagggtaggatgctgtgtgttatttgtagtggtactctttttaggttgatttatttgtttttttattcagttatttcctactcttgcaacaagcacttaacaacctactctgcctactctgttcctactgaacagtaccactattaagtattaccttattatgatattaaggtaatatcataatttatttgcttttatggttcagaatctcatgattcagttatttcctactgtctctattcagtattacaacatctattgtcgttttttttagataattcaacacctgaaagtaactatgcataatcatattccagttaatgagtagaaacctttaataggcatcttttgatagaaaggattagagctaatcctttgatgggcaacaaaatccccaccaatctgaagaggtcaggttaaaagccctatcagttcaatttgcttaagttaatgttatcaacttgtcttgaaggctaattatagaagtacacgaagaaaaatggtgcctggaccaaagtgagaccatctcataatgctaatgcttttgcgacaaatggaagatcatcgagcccatactacgcccaactatgtaagtagtagttattgatggtgcaacctgggaattgctggctttgctactcccatgagtaacacatttaccagctagactctgcatgtgtaggattttttctctggagattatcagatgaagcagttaggtcataagatgtatgatcaagattccccgtcaagcgattctggacagtcacaccaagaagaatctgccatgaatgatagcagtccaaatgagcgacatacctcaacacaatctggtaatgcatgatatttaaaagtattgtcataatggtaatccggtcttagtatagtttcagatcttattgtcgcaacatattcttcgcttcaatcatgtctctttaaaacacatttgtagatgctgcttcttggttggcaatcgtttgtctatggatgtagtgccaagttgaatgtattcatgataccaatacgttcaatgattatttgcaagctcatctatgctatagtgcaagtgactttatggtagctgtaaattgtgacgagctgctgtggtcttaggcaaccttttttctggattatgtgaacttttcatttgagtttccacatgaaacccatattggaacgaagagtattatcatgtgtttccacatgataatagttcatatgcgtcaaaactcaaaaccatgtcatctgttttgtatgtaatgctcacgtttcaaattttcctttattgttgttattactatgcttctcaccaaaccttcgagtaatcttttgcatattctgaagtgacagttttgatgagtctgtcatttcattagtgagttttcctgttattccttctagtgctcaatttacatcgattatctctgttaatcattccggtgcccaacctaacatctcgtttgtccttttttccccctcagacaatgatgatggtcatcagatgccagatcaggacaaaacaaagtcagtatcatcgttggggaatccaggagctttgcctccaaagctcaactatagccaatcctttgtaagttcatgcaattgtgtggattgttgccctctttgaatcaagtgttactttcagttgaccagctatgttgtgttctaggcttgtattccttatacagctgatgcatactatggtggggtcttgactggatattcttcacatgcaattgtgagttcactctaccatttctgttctcacatcaaatttgtacaatctttgacgattcaaggtgataagatcatttttctcccctcttcatccatttacaatttgatgagcatcgaagatcttattcattctggtagttaagcaattgttgcagtcgagtattattcagaagcaaaacaaaagagtagacaggtgctttgaaataaaagagaggaatttgcaggggactcgtgcatcctttttgttgaacttcattaatatttagaaggaaaaaaaataaaacaacaaagagtccttttaaataaaacttaaaggtggggagtttgcaattgattcatgcatcttttttagattaaagatcgtagcttcatcgatggattttggacttcgtacaaaccatttctaagcttatcagctaaaagatgccacccaatcaaaactgtcttcctgagaaactagatgatatattgtataacacttatttcgtgcatcttcgcagtacatttttttaaaattttcttatggcacagcatcaacaatttgtcatttgtgtattatttacccaggttcatccccagcaaaatggtacagctaactcccgggtgccgttgcctgttgagcctgcagcagaagagccaatatttgtaaacgcaaagcagtaccatgcaattcttaggaggagacagatacgagctaaattggaggcccaaaataagttggtgaaaggtcggaaggtaatacgaaatgttgcaatccttcctggtacccttttttttttctttctgctatgaaactgtaaaagagatgctcctgttagtacttccctaattttcttagatacatgctgactgctgcactgcatctttacatatctttcagctaaaaattcattatcctgccttgggttacttagggagttatctgtgctcagagtacatctttatgctattcattgatcaaaatatttggactcagtatgtttaaagtgatcaccatcctcaatcacatgggtgattcatttctcaaggcaaaataatagctacttacagctatacattttaacttacaattacccctgttataagttaaaaacatttctcctgtcttctcagccatacctccatgaatctcggcatcgccatgccatgaagcgagctcgtggatctggagggcgcttcctcaacacaaagcagctcgaggagcagaagcagcaacaggaggaggaggccgcatccggtggcgcgagctctggcaataggacatgccttcagaatggcaccggtagcgcgccttcagcttcctctccctctgaaatcgcgagcgtctcaaccagcagagaattccttggtaaccatgagcagagccacttcccctcagctggcttccttcccacaatgagcttcagagcgcagaatggcggagatgggaagctggtcgcgaacgccattcaccagcgcgtttccatgatgaggtgaggtgaagaggggtgaagtgggttcagctcagcaccatcactttggctctctccctgctggtggcaattcatccttggcttatgaaaataccttatgggaaaaaaaaaagtagtttcatcctcaaatggaccaaacatgtgtggctccattttaagttttcctgtaactaaaagcactgcaatgatcaactgactgttggttctgtttgtggatgcttatatctgtacttgctgtatctaatactgaactctaagttgaaaccctgaaactgatggtccccgtgaatattgtagcttgcattttatc</dnaseqindica> |
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