Difference between revisions of "Os07g0620300"

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(Created page with "{{JaponicaGene| GeneName = Os07g0620300| Description = Clathrin adaptor complex, medium chain family protein| Version = NM_001066834.1 GI:115473400 GeneID:4343931| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0620300|
 
GeneName = Os07g0620300|

Revision as of 20:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0620300

Description

Clathrin adaptor complex, medium chain family protein

Version

NM_001066834.1 GI:115473400 GeneID:4343931

Length

4929 bp

Definition

Oryza sativa Japonica Group Os07g0620300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26301034..26305962

Sequence Coding Region

26301182..26301239,26301383..26301477,26302163..26302366,26302580..26302696,26302821..26302949
,26303328..26303454,26303911..26304014,26304106..26304210,26304304..26304398
,26304511..26304596,26304704..26304766,26304854..26304927,26305606..26305704

Expression

GEO Profiles:Os07g0620300

Genome Context

<gbrowseImage1> name=NC_008400:26301034..26305962 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26301034..26305962 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatctcgcagttcttcgtgctgtcgcagcgcggcgaccacatcgtcttccgcgactatcgcggggaggtgcccaagggcagcgccgagatcttcttccggaaggtgaagttctggaacgacgacgaggccgaggaggcgccgccggtcttcaatgttgatggcgttaattatatccatgtgaaagtcgcaggactattttttgtggtaactacaatggttaatgtctctccgtccctcctcttggaactcttgcaaaggattgcacgtgttacaaaagattaccttggcgttctaaatgaagattcattgcggaagaatttcattttagtgtatgaattgctcgatgaagtcattgactttggatatccacaaaccacctctaccgaggttctgaagtcatacatattcaatgagccaataatggttgatgctggtcggctgcctccacttggtcctgctgctatgttcatgcaaggcactaagcgtatgcctggtacagctgttacaaaatctgttgttgctaccgaacctggtgggaagaagagggaggaaatttttgttgatatcattgagagaataagtgtgacatttagttcaagtggttacatacttacatctgagattgatggaaccatccaaatgaaaagttaccttactggaaatccagaaattcgtctagctctaaatgaggatttgagcataggaagaactggctcttcttcgtatgattacagaagttcttctggaggaggagctgtcattcttgatgattgcaatttccacgagtcagtacatctggatagttttgacattgacagaactctacatttaataccaccggatggggaattcgctgtaatgaactaccggattactcaagaatttaagccacctttccgtgtgaccgcactaattgaagaagccgggccatctagggctgaagttctattaaaaatacgggcagacttctctgcaaatgtcactgcaaacacaatagtagtacagatgccagtgccatcttacacaatgagggcaagttttgaattggaagctggagcagttggacagacaactgattttaaagaaggatccaggagaattgagtggaatctaaagaagatcgttggtggttctgagcacacccttcgggcaaagctcacattttcccaggagtcacatggaaatctcacaaaggaagctggaccagtaaacatgaatttcactataccgatgtacaatacttcaaagttgcaggttagatatcttcagatagcaaagaaatccaagacatacaacccctataggtgggtgagatacgtaacgcaggctaactcatatgtggctcgtctatga</cdnaseq>

Protein Sequence

<aaseq>MISQFFVLSQRGDHIVFRDYRGEVPKGSAEIFFRKVKFWNDDEA EEAPPVFNVDGVNYIHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNED SLRKNFILVYELLDEVIDFGYPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQG TKRMPGTAVTKSVVATEPGGKKREEIFVDIIERISVTFSSSGYILTSEIDGTIQMKSY LTGNPEIRLALNEDLSIGRTGSSSYDYRSSSGGGAVILDDCNFHESVHLDSFDIDRTL HLIPPDGEFAVMNYRITQEFKPPFRVTALIEEAGPSRAEVLLKIRADFSANVTANTIV VQMPVPSYTMRASFELEAGAVGQTTDFKEGSRRIEWNLKKIVGGSEHTLRAKLTFSQE SHGNLTKEAGPVNMNFTIPMYNTSKLQVRYLQIAKKSKTYNPYRWVRYVTQANSYVAR L</aaseq>

Gene Sequence

<dnaseqindica>149..206#350..444#1130..1333#1547..1663#1788..1916#2295..2421#2878..2981#3073..3177#3271..3365#3478..3563#3671..3733#3821..3894#4573..4671#acttgctctcctgctcgtcgccgcagcggttacgtcacgtcacgtcacagccaggccacgggcgtacgcgcgcgcgcgcgaggcctgagaagcaaggtattgggctgggagcgagggggtggtggcatcgcggtggtggggggtggagatgatctcgcagttcttcgtgctgtcgcagcgcggcgaccacatcgtcttccgcgactgtaagatctggatccccgtccttcttcttcttgttgttttttttttctttactccgtggaatttggcacggtttttgggtgtgatctggtgctgatctggttgggggggattttggatgggtgcgtgtgtggtggggatgcagatcgcggggaggtgcccaagggcagcgccgagatcttcttccggaaggtgaagttctggaacgacgacgaggccgaggaggcgccgccggtcttcgtacgcatccgtgcccttctcttagtcctcttattcgcactttattggtagaaattctgcggtttttagcagtgattttgaggggttttttttcccctcgtttaactgtctaagttgttaatagttcggaacactatggttctgtgaataattagcattagctagcggttgggacaaatcacctgataaaatttgattatgtttgggattgtcgtgtccttcatgtttgattcgtttgatgttagtgatttttcctaaccattatgttaccatttggtagtgggtagtttagctcttgttaatgcgtgattggttaagtgcaaacctaggatataagctttaaatgagctgagattacttagtgtattacttgtgcgatttattttattagcactgaaactatttgactagtggcggtaaccaaattcaagagatggaactttggagcttgtgctgcatattactggattgtgagcggcattacagcttgcagttggttcatgttagttgtttgtgatgcatacactggaaactgttatgtttattaacctgtagaatgccatgaccctagattaaattgaaaaagatggcaggagccatggtgatcctactactcgttctgttctgtttgcatcacgttcccacttgttctcacactggccttttatccattttgtgatggcagaatgttgatggcgttaattatatccatgtgaaagtcgcaggactattttttgtggtaactacaatggttaatgtctctccgtccctcctcttggaactcttgcaaaggattgcacgtgttacaaaagattaccttggcgttctaaatgaagattcattgcggaagaatttcattttagtgtatgaattgctcgatgaagtcattgtaagtactatgcactatttcttcagacaatataacttccaaccctttgtgacctgtattttttggattactagcaaagtctagcgtgtgcttatcagcaaagtagtatggttttgaagtgagtagtacggttcatctgtttttgggaacaattgctatcatcttttggtaccactatatgcgaatatttatggattgaattgtgtaatttaggactttggatatccacaaaccacctctaccgaggttctgaagtcatacatattcaatgagccaataatggttgatgctggtcggctgcctccacttggtcctgctgctatgttcatggtaactctcctggttattatcacatgaaaaaacgggttttgggctactttaacaagcgccgtataagtttccgtggttatcttgtcaatgacatggttccgttgaatttctgtgtcttttgcagcaaggcactaagcgtatgcctggtacagctgttacaaaatctgttgttgctaccgaacctggtgggaagaagagggaggaaatttttgttgatatcattgagagaataagtgtgacatttagttcaagtgtaagtgctgatatataccattcctctgcagattctcttcaataagcatttcaagttgcttttgcttttcttcatacctacttgaaatcctaaatatgtttgtgttgtatatgatggttatgcgtaagtacttcagtatggtagttaactggttatgcccattggaattttaattttctgataccatacatagagctggaactgattgtctgagctgtcaaaatttagtctctcttttgtgtttattcagcttcaacaactaaagggcagcatatctatctttatacttctatagctattatggctatggttctctaatagtatcagtgtaatggagaactaatgcttttgtgctccaatcttctatgcattctgcagggttacatacttacatctgagattgatggaaccatccaaatgaaaagttaccttactggaaatccagaaattcgtctagctctaaatgaggatttgagcataggaagaactggctcttcttcgtatggtacaatacttggcatatcttcctttgtcagctgagtttggaaaatggacttatggttgcataaagaaacatgatatgccatttttcctgtatttctacatcatttccgatcatgtattttgtgtgtgacattcaaaaccacttatgatgacacttatgatgacccccgcaaaaaaaaataaaataaaaatgatgacacttattgtgaaattggacatataatgagttattccatgcacgcatctcaatgttactaccagcttagttcacctatttacattttaaaaatcctactgcattttctaactgaagtttcagtgttcaccgccctgtttttttatgacatgaacttcatgcactgtgttatttcaatcatgacaaacttgttgtgcatgttatctttgtctctgtttacacggtgtggatatcattgatctcacaaaaacaaatatacagattacagaagttcttctggaggaggagctgtcattcttgatgattgcaatttccacgagtcagtacatctggatagttttgacattgacagaactctacatttagtaagtactgatatgatgcttttatttatttttgttatttgttttacttcagataccaccaagattgacatttatattcaccatttaacagataccaccggatggggaattcgctgtaatgaactaccggattactcaagaatttaagccacctttccgtgtgaccgcactaattgaagaagccgggccatctagggtatgtcatgtttgtactgttatcaagtgccaacaaaattatttttttcaattttcatggatttgaactaaacatcttggtatgtgtacccaggctgaagttctattaaaaatacgggcagacttctctgcaaatgtcactgcaaacacaatagtagtacagatgccagtgccatcttacacaatgaggtgagctacagctttatttggtcccttttgtgtttggaattggaaagtgaaacgctgctcctgttagtttgttactattagttgaagagttatattatggattactttgcagggcaagttttgaattggaagctggagcagttggacagacaactgattttaaagaaggatccaggagaattgagtggaatctaaagaaggcaagcaccaacaaacgatttaatctttgctttctttcctttattttctcttccttgtttgttaactagtttgctgtacgctgctaaatcatcttaattttgcacagatcgttggtggttctgagcacacccttcgggcaaagctcacattttcccaggagtcacatggtataattttggattgcagctttcttgtctatgctccaagtgacttctctgttataaaacttatgtcacgcttcttctggaatgcaggaaatctcacaaaggaagctggaccagtaaacatgaatttcactataccgatgtacaatacttcaaagttgcaggtaagggcatctgctacagtatactacctggaatgcgtcaattacccagggatatgctcagatctatacttactcctttaaaagtctccagtggtgctggcagtgaatctgccaccccaccactatttatagttttttggcccctggtattttttatattatggaatagtctaaatatttgattcaaacaagtcaataccatatattcaaacatgcaaacaaatgatactaacatatttgataaaattttttttgtctattgcatattataatatatttttattttatccatagcaaagcttgggcattttgctatttaaggagaaaagaaagaagcccttttacttagcccttttactactacatatgttacctttagagcaagtttaatagtataaccgactactagctccaaattatctatagccaatgtaatagtcaattcatacaatagtttattactatattattaatacctggtcccacctgtcatacacacattacgtcttatagtccgtgttgcagctggctacagatctgtagcccattgctcttctctctcttcctttatctctttaaaatatgtttatagctggtttatagcccgctattgtacttgctcttagtaccaaatgttttggatgcacacaatgaattttaccattttttaacctgcaggttagatatcttcagatagcaaagaaatccaagacatacaacccctataggtgggtgagatacgtaacgcaggctaactcatatgtggctcgtctatgagatagcgatgctttgtatacatctccctctggtcatttccccttttccttgcgctattatcttcgagggacttcaagcaagcttggacagagtgtcatgcattgcattgtaattttatagagcaatcccaaacttaaactcttctcctgcagttaatatctacctagggcaatttatttttccttgtgtaatatgcaggagatacatgatcatatttttgtatgctgtgaaaatgaatgaagttattgttcatcacat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0620300, RefSeq:Os07g0620300