Difference between revisions of "Os07g0657900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0657900| Description = Similar to Thioredoxin reductase| Version = NM_001067050.1 GI:115473832 GeneID:4344159| Length = 4428 bp| Definitio...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0657900|
 
GeneName = Os07g0657900|

Revision as of 20:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0657900

Description

Similar to Thioredoxin reductase

Version

NM_001067050.1 GI:115473832 GeneID:4344159

Length

4428 bp

Definition

Oryza sativa Japonica Group Os07g0657900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28354780..28359207

Sequence Coding Region

28354836..28354872,28354954..28355025,28355170..28355383,28355475..28355580,28356012..28356277
,28356938..28357217,28357453..28357560,28358013..28358099,28358185..28358289
,28358732..28358862,28358986..28359046

Expression

GEO Profiles:Os07g0657900

Genome Context

<gbrowseImage1> name=NC_008400:28354780..28359207 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28354780..28359207 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtcacgcgcctcgccgtggccgccgccctctcggccaaggcgttgcgcgcgtcggctgcccccgccgtcgacgaggaggcccccgcatccccgcctccatcagatcttggcaagggagtggagaacttggtgatcataggctctggcccggcggggtacactgccgcgatttacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgttcctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggcgtcactgggcctgatctcatggacaaaatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgtgaatgtgaagagcagaccgtttgttattcgtagcagtgatcgtgaggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatgcaggaccgagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgtgcaggatcatgaatggaggcaagccgttactgcagctggatccggatgtgtagccgctttgtcggtggaaagatacttagttgccaacgaccttcttgttgaatttcaccagcctgttcgcgaagaaaaggagaaggagattacagatagagatgtcgagatgggctttgacatttctcacacaaagcataggggacagtatgcactccgcaaagtatatcatgaaagtccaaggcttgtctgtgttctatatacttctccaacatgtggtccttgcagaaccttaaagccaattctaagcaaggttatagatgagtacaacgaacacgttcattttgtcgaaattgacatcgaggaggatcctgaaatagcagaagctgcaggcatcatgggaacaccatgtgttcaattttttaaaaataaagaaatgctcaggactgtctctggtgttaaaatgaagaaggaatatagggagtttatcgagtcaaacaaatga</cdnaseq>

Protein Sequence

<aaseq>MAVTRLAVAAALSAKALRASAAPAVDEEAPASPPPSDLGKGVEN LVIIGSGPAGYTAAIYAARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPDGVTG PDLMDKMRKQAERWGAELHQEDVEFVNVKSRPFVIRSSDREVKCHSVIIATGAAAKRL RLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKYARHVHLLV RKDQLRASKAMQDRVLNNPNITVHFNTEAVDVVSNPKGQMSGIQLKRTDTGEESVLEV KGLFYGIGHTPNSQLLQGQIDLDDAGYILVEEGTAKTSVDGVFAAGDVQDHEWRQAVT AAGSGCVAALSVERYLVANDLLVEFHQPVREEKEKEITDRDVEMGFDISHTKHRGQYA LRKVYHESPRLVCVLYTSPTCGPCRTLKPILSKVIDEYNEHVHFVEIDIEEDPEIAEA AGIMGTPCVQFFKNKEMLRTVSGVKMKKEYREFIESNK</aaseq>

Gene Sequence

<dnaseqindica>57..93#175..246#391..604#696..801#1233..1498#2159..2438#2674..2781#3234..3320#3406..3510#3953..4083#4207..4267#ccatcctctccctctcctctactccacaccctccgcttctccactcctccctcgcgatggcggtcacgcgcctcgccgtggccgccgccctctcggccgcgccgccgtcctcccgccgccgcagggccttcttccatcactcctgccgcccgctcccttcgtcggcggcggcggcggccaaggcgttgcgcgcgtcggctgcccccgccgtcgacgaggaggcccccgcatccccgcctccatcaggtgctcgcgccctcgctctctattgctccagatttttttttagattggactgttccgagtgttcagtccgcgccgtgcgagctcgcttgcatttgatctgatgctgtccatggagctgaagacgatgatttgctgttcgtgcagatcttggcaagggagtggagaacttggtgatcataggctctggcccggcggggtacactgccgcgatttacgccgctcgggcgaacctcaagcccgtcgtgttcgaaggctaccaggttggtggcgttcctggtgggcagctgatgaccaccaccgaggtggagaatttccctgggtttccggatggcgtcactgggcctgatctcatggacaagtaaacattgctcatttcttcgcatgtttttgagtttatctgttgttaatgttgtgttcacttgctcatatcgggccatggattaaatcagaatgcggaagcaagcggagcggtggggtgctgagcttcaccaggaggatgttgagtttgtgaatgtgaagagcagaccgtttgttattcgtagcagtgatcgtgaggttagcatcattgtgctcttcctccttttcgagttatgaactttccacttttcacaaggtgtcattgttggtttatggtaatacaatgttcttgacaatagcgattttcacaatgttcttgacaaaagtattagtatgatttaaacaaaactatcatccatttaattaagaatataacaaaggagagctggtcaagttgtgtcgggaaagcatatcagtatacaatttttatatggtttacttaattagctcttacaatatttgcctagtcatgtgctttagttctttagttgtgctgtaacttctctttctataagtataatgaccagtttgatatagcatatagcagtcgtctgttataattaatagtgcacagaactactttggacaaatgtttttgctgcgctcatcccagtgagtgtcctatacaggtgaaatgccatagtgtaatcattgctactggtgctgctgctaagcgccttcgattacctcgtgaagatgaattttggagtagaggtatcagtgcatgtgcaatatgtgatggagcatccccactatttaagggtcaagttcttgcagttgttggaggtggtgatacagctacagaggaagctatatatttgaccaaatatgcacgtcacgttcatttacttgttcgaaaggatcagctacgagcatccaaagctatgcaggaccggtaaggaactttcaagtcctatccctagtaaatgtatatatttaccttcaagtgactactctgttcatgtaaatatcttgcccatgaattgttaggatctcacttgttttgtgcattcacattgttaatagcttaaatgactcataacacaggaggattgcttttctcttttcagctgtagtgtttttttatttatttttataacacatttaccttttggatctggcttacaagggcatagttatatgctgggctacagctttcaaatggtgtttacaattagctcctgacatggattaagcaaccttgcagcttgactcacttttagcatctcaccaagttagacagtggaaattgtaaaattggtttatatttaggagaaacctgaggacaaacactttgggcctgtttggctgcacttaactttcctgttgtgcagccaacacaaacagtaagttgagtctgtagctgcagcagcaacggctgcgcacagtggctgtaccagccagccgaacagggcctttggaacttatctgtatattaatttgttatgttctttgaaggatgtagcttgtcttcagttgcataaaatattaatgaggtaaaattttcaattccctggatgtttggttaacaggttgattatggcgaatgtttcagagtactcaacaatcccaacataacagtacatttcaatacagaagctgtggatgttgtcagcaatcccaaaggccagatgtctggtattcaactgaagagaaccgacacgggagaggaatcagttcttgaggtgaaaggtctattctatggcataggacacactccaaacagtcagttgttacaaggtcaaattgatcttgacgatgctggttatattttggttgaagaaggcacagcaaaaacatcagttgatggtgtatttgctgctggtgatgtgcaggtaactccatccttcacttcatgtatataacttctacatggctgtaatgtgtttcattcttgaaatttgaatataaccctgccacagttcatatgtgccataatcattagcatgtcatgtcttggtggtcttgtagcacaccagcacatcacgtcttcttttattgaacactagctggattggaatacaaatatgagtattctagttttaatgccttttcaatgtttatctgcaggatcatgaatggaggcaagccgttactgcagctggatccggatgtgtagccgctttgtcggtggaaagatacttagttgccaacgaccttcttgttgaatttcaccaggtactatcttgtctgcagcatatatttctttatggtgactgatgcttctgcgaacattatctagctcaatatttgttgttccatggaggctagctgttccactgtcaaattttgtgcctatgattactggtacaccagacactgcagcaatttctgctgttgatctttttcctctaattttagggtttctagttgccatatacagcaattctgtgcagaccatgttgtgcttttatttcatgtataaaatttgaggttggaccttgtcagcatgtattggtattgttatgtgtaatcgagaatatatttattctagaaatgtgaaaggatgaaactaaatctatttgtcattgtatatgtatcgatcaatgcacatttagcatttttaattgaccatctctagcaaccggtcaggcttacaagatacacttcatctttttattaaattacagcctgttcgcgaagaaaaggagaaggagattacagatagagatgtcgagatgggctttgacatttctcacacaaagcataggggacaggtacctaacacatttgcttgtactgtggcttcatattggtgcaaacatttatgtgaaaactgatttgagcttgcttcctttgcagtatgcactccgcaaagtatatcatgaaagtccaaggcttgtctgtgttctatatacttctccaacatgtggtccttgcagaaccttaaagccaattctaagcaaggtttgttcttgaaattgaaattgggctctagtcgtcacaagtcatcactctagacaaataaaatgccttgatatacagctatctgattggccctccagtccatcgatcattatgcattcatattgacaggccatgttaacgttcatttctctgatctaccaatatgaccaatcaagttcatttctctgatctacaatatcgaatcattaaagaaaatccatttcaaggtgctaactttgtgatgttcttgtggtctggacaacacaggttttcagtgcttcttgataaaccttgtagaactgatatttatagttgcttgactaacatttgattgccgcaccattctacagaagttccgttctgttagtcatgcttgtgttagttttgttgttaacgttgctagttgctacttggcacttgctaatattgatatctttttcaggttatagatgagtacaacgaacacgttcattttgtcgaaattgacatcgaggaggatcctgaaatagcagaagctgcaggcatcatgggaacaccatgtgttcaattttttaaaaataaagaaatgctcaggttggctatcttggatttgtttatctgctactagtctatataaacatcagtcacttcattgctgcctaattaatatgatgcaatggaatcccttctgatcgtttttaaccttggactatgcaggactgtctctggtgttaaaatgaagaaggaatatagggagtttatcgagtcaaacaaatgagctgaacccaacatacgattcaaattttaaagtgtaatagtcttcttttgcccatactgactatttctagctgccaccgtggtggccaatttttggtcaaaaattttcagatgggccgggtgtagtgcggttcaagaggaaattagccggtcgctcctatt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0657900, RefSeq:Os07g0657900