Difference between revisions of "Os07g0667400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os07g0667400| Description = SAM (and some other nucleotide) binding motif domain containing protein| Version = NM_001067110.1 GI:115473952 GeneID...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os07g0667400|
 
GeneName = Os07g0667400|

Revision as of 20:41, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0667400

Description

SAM (and some other nucleotide) binding motif domain containing protein

Version

NM_001067110.1 GI:115473952 GeneID:4344221

Length

2913 bp

Definition

Oryza sativa Japonica Group Os07g0667400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28850040..28852952

Sequence Coding Region

28851650..28852304,28852499..28852860

Expression

GEO Profiles:Os07g0667400

Genome Context

<gbrowseImage1> name=NC_008400:28850040..28852952 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28850040..28852952 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgccgtcgagcgcctccgccacggcgcggatgctcaccgtgccggcgctgctcctcctcctctcctccgccgcgctccttgtcttcctcatcctaccgtccctctccccgtcccccgccgcgcacctctgcgcctgctcgcccccgaccaccacgcacaccaccactaccgtcaccaccaccaccaccaccgcctccccggcgcccgtcaccacctcccccgccgacgtcgcctggctcaagtctcagctcgcctccaactccctcccgctcctcgcctcccacgacgcatggcaccgcctccgcaagggcatcaacccccgcacccgcgagcagcagctcttcgacatcaacaggcaccatgggatctcgcattacccggatgaagaggcaactaaccacactgcgctgccttgccccggggagctcctggttgaagagcatcacagtaactatggcgagccgtgggccggtggccgtgatgtctttgaattccttgctaatgcctccgcgctcacgcctagagaccaagttctggaaattggatgcgggactcttcgcgtcggtcttcacttcattcggtttctggaggcggccaagttccattgtctggagcgggatgagctgtccctcatggctgcacttcgctatgaactgccagcgcaggggctgttgtacaagcggccaatgatcgtgagaggggaggatatggatttcagcaggtttggggatacggttatgtatgatcttatttatgcaagtgctgtgttccttcacattccggataagcttgtttggactgggctcgagaggcttgcagggaagctgaggccacagagagggaggatttttgtgtcacataatattaagttttgctcaagattgggtggtgatgagtgcacacggcggctcacggaattggggctcgagtatgtggggaagcacactcatgatagcttgttgttcaaccattatgagatatggtttgaattccgaaggccaaaagtttaa</cdnaseq>

Protein Sequence

<aaseq>MAMPSSASATARMLTVPALLLLLSSAALLVFLILPSLSPSPAAH LCACSPPTTTHTTTTVTTTTTTASPAPVTTSPADVAWLKSQLASNSLPLLASHDAWHR LRKGINPRTREQQLFDINRHHGISHYPDEEATNHTALPCPGELLVEEHHSNYGEPWAG GRDVFEFLANASALTPRDQVLEIGCGTLRVGLHFIRFLEAAKFHCLERDELSLMAALR YELPAQGLLYKRPMIVRGEDMDFSRFGDTVMYDLIYASAVFLHIPDKLVWTGLERLAG KLRPQRGRIFVSHNIKFCSRLGGDECTRRLTELGLEYVGKHTHDSLLFNHYEIWFEFR RPKV</aaseq>

Gene Sequence

<dnaseqindica>649..1303#93..454#ggtcgccgcgcacgacgcgacacgagccgagatccccaacccaccggcggcggcgcgagcacacgatccgccccccatctccggcgccggcgatggcgatgccgtcgagcgcctccgccacggcgcggatgctcaccgtgccggcgctgctcctcctcctctcctccgccgcgctccttgtcttcctcatcctaccgtccctctccccgtcccccgccgcgcacctctgcgcctgctcgcccccgaccaccacgcacaccaccactaccgtcaccaccaccaccaccaccgcctccccggcgcccgtcaccacctcccccgccgacgtcgcctggctcaagtctcagctcgcctccaactccctcccgctcctcgcctcccacgacgcatggcaccgcctccgcaagggcatcaacccccgcacccgcgagcagcagctcttcgacatcaacaggtataaaccccatcgaatactcagccacactgattcatacttcagatcgctgcatttcgatttaatgcttcgccgctgcgctttagtctgaccttgttaggttacctcatctagttggttccaagcagtcaagtaccgtgaaaaaaatgtgatgcaattgaaattaacatcttagtaatgcacctgaattgcaggcaccatgggatctcgcattacccggatgaagaggcaactaaccacactgcgctgccttgccccggggagctcctggttgaagagcatcacagtaactatggcgagccgtgggccggtggccgtgatgtctttgaattccttgctaatgcctccgcgctcacgcctagagaccaagttctggaaattggatgcgggactcttcgcgtcggtcttcacttcattcggtttctggaggcggccaagttccattgtctggagcgggatgagctgtccctcatggctgcacttcgctatgaactgccagcgcaggggctgttgtacaagcggccaatgatcgtgagaggggaggatatggatttcagcaggtttggggatacggttatgtatgatcttatttatgcaagtgctgtgttccttcacattccggataagcttgtttggactgggctcgagaggcttgcagggaagctgaggccacagagagggaggatttttgtgtcacataatattaagttttgctcaagattgggtggtgatgagtgcacacggcggctcacggaattggggctcgagtatgtggggaagcacactcatgatagcttgttgttcaaccattatgagatatggtttgaattccgaaggccaaaagtttaagtcttgatagttggaagatagactggtgtggcatccattttgtaattttggtggtgtgaagtgcagagcaagctatggcctgtagttgtatgccaatgagctctgacctgagatcgagatcattgtttgctgggtgttggttcactttcgaccacacacaacactcaggatgaaagatccaatcgcccttgagccttccgaattacatctggtgagtggcgattgaaggctgtagttttcattagagacaattattggatttactgtaatgctgctagtttttctgcaagaaatgttttggtagctcaagtcttatacatttttagagcacaatatacctactatggtcaagtagaactgtattacctcgtaaggtttagtaatatatgacaaggaaaactctgttattctatatgatcaaggagtacacttttgctatgatacggtatcttgataaattgttcaatgcataagcgtattgtattgttaacttacagttggtcatatattggtaattagttggatgcatatgtgcaccatggagctgttgatatcatcaattggtactttcctgatgtggtgaccaaatctgtataagcccaatctgagcaggaaatgttggggtattgtgaaatggactgaatcttctcatgtctaaaaaaatatactaaattcccccaaaaaaatcatggcttactagtcatcattaaatcagttactgtcctgaaaataactttttcatttgaagagaataaccgtcatttcaacttgagcatatgccctttctatcatgattcatgggttttgcctagcttgggttctgtactactaaagatgctgacatgtgacattggctggtccatcctctcaatttcaagatttatttctgctttgtggggctaaagaatcattgttcttttgattcttctttaaagcatccgctgcgcatcagcggcctccataaccgatcctctcacggctgtatttttgcctgcacattgagtattcagcttattttccttctctctacacaaacttaatctcctaataccccatttcatgtaatgactccacaagaaaccatcatgttttcttacaaaatgatgggccaggtgattttcctttcgacaaaattctgtttcagctagtactacatacagtatgaggttatgttgctgacttactgtagttgatccttgcttgtcagcactcagcagctgctactgttggactttaaaatatgatcatatgcatatactttgtgctgatgatacatacatacaccaatggggggtgccttgaatttattgtcaacttttgtgttagccagtgtattgcaggtggcagcatcacacgcctgaattggtccaagacaagactgcagaagaagaagaggaagaggaagcagaggctgaagggtggccgtcgccgtcggaggctgaagaaatcgctgccgccggcgccggggaccccttggagcgcgtccttttgttgtatctagacgggtcagtgtaaccatcctcgaaagagactcgcatcctcttccttgtgcaagtagtatctatgtacttaaaacgaagatgcattggatgatggcgtcttctgtgcat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0667400, RefSeq:Os07g0667400